RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF326Q5BKZ1 582 aaKnown RBP30.92■■■□□ 2.54
TPM1-204ENST00000334895 STAG3Q9UJ98 1225 aa30.9■■■□□ 2.54
TPM1-204ENST00000334895 KDM2AQ9Y2K7 1162 aa30.9■■■□□ 2.54
TPM1-204ENST00000334895 NBPF8Q3BBV2 869 aa30.87■■■□□ 2.53
TPM1-204ENST00000334895 MYOM2P54296 1465 aa30.87■■■□□ 2.53
TPM1-204ENST00000334895 RPGRIP1LQ68CZ1 1315 aa30.87■■■□□ 2.53
TPM1-204ENST00000334895 PRAG1Q86YV5 1406 aa30.85■■■□□ 2.53
TPM1-204ENST00000334895 ZFYVE9O95405 1425 aa30.83■■■□□ 2.53
TPM1-204ENST00000334895 NRXN1Q9ULB1 1477 aa30.82■■■□□ 2.52
TPM1-204ENST00000334895 STRCQ7RTU9 1775 aa30.82■■■□□ 2.52
TPM1-204ENST00000334895 RIMS2Q9UQ26 1411 aa30.81■■■□□ 2.52
TPM1-204ENST00000334895 TMEM2Q9UHN6 1383 aa30.8■■■□□ 2.52
TPM1-204ENST00000334895 ADGRF5Q8IZF2 1346 aa30.8■■■□□ 2.52
TPM1-204ENST00000334895 STAC3Q96MF2 364 aa30.8■■■□□ 2.52
TPM1-204ENST00000334895 NUTM2DQ5VT03 806 aaPredicted RBP30.79■■■□□ 2.52
TPM1-204ENST00000334895 SLIT1O75093 1534 aa30.78■■■□□ 2.52
TPM1-204ENST00000334895 ARHGAP23Q9P227 1491 aa30.78■■■□□ 2.52
TPM1-204ENST00000334895 TRPM1Q7Z4N2 1603 aa30.75■■■□□ 2.51
TPM1-204ENST00000334895 POLR1AO95602 1720 aaPredicted RBP30.75■■■□□ 2.51
TPM1-204ENST00000334895 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
TPM1-204ENST00000334895 PIK3C2GO75747 1445 aa30.73■■■□□ 2.51
TPM1-204ENST00000334895 VGFO15240 615 aaPredicted RBP30.73■■■□□ 2.51
TPM1-204ENST00000334895 RALGAPBQ86X10 1494 aa30.72■■■□□ 2.51
TPM1-204ENST00000334895 LTKP29376 864 aa30.69■■■□□ 2.5
TPM1-204ENST00000334895 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.68■■■□□ 2.5
TPM1-204ENST00000334895 KIAA1210Q9ULL0 1709 aa30.67■■■□□ 2.5
TPM1-204ENST00000334895 NRXN3Q9Y4C0 1643 aa30.65■■■□□ 2.5
TPM1-204ENST00000334895 HDGFP51858 240 aaKnown RBP30.63■■■□□ 2.49
TPM1-204ENST00000334895 NBPF1Q3BBV0 1214 aa30.63■■■□□ 2.49
TPM1-204ENST00000334895 TXNDC2Q86VQ3 553 aa30.63■■■□□ 2.49
TPM1-204ENST00000334895 CFAP70Q5T0N1 1121 aa30.62■■■□□ 2.49
TPM1-204ENST00000334895 SCAF11Q99590 1463 aaKnown RBP30.62■■■□□ 2.49
TPM1-204ENST00000334895 NCKAP5LQ9HCH0 1330 aa30.62■■■□□ 2.49
TPM1-204ENST00000334895 SETBP1Q9Y6X0 1596 aa30.61■■■□□ 2.49
TPM1-204ENST00000334895 GPRASP1Q5JY77 1395 aa30.61■■■□□ 2.49
TPM1-204ENST00000334895 SENP3Q9H4L4 574 aaPredicted RBP30.61■■■□□ 2.49
TPM1-204ENST00000334895 C14orf93Q9H972 538 aaKnown RBP30.61■■■□□ 2.49
TPM1-204ENST00000334895 IQGAP1P46940 1657 aa30.6■■■□□ 2.49
TPM1-204ENST00000334895 EID1Q9Y6B2 187 aa30.6■■■□□ 2.49
TPM1-204ENST00000334895 LAMC1P11047 1609 aa30.6■■■□□ 2.49
TPM1-204ENST00000334895 ROCK2O75116 1388 aaKnown RBP30.59■■■□□ 2.49
TPM1-204ENST00000334895 PLEKHG1Q9ULL1 1385 aa30.59■■■□□ 2.49
TPM1-204ENST00000334895 SETD1AO15047 1707 aaKnown RBP30.58■■■□□ 2.49
TPM1-204ENST00000334895 ALKQ9UM73 1620 aa30.58■■■□□ 2.49
TPM1-204ENST00000334895 ADGRB1O14514 1584 aa30.56■■■□□ 2.48
TPM1-204ENST00000334895 ASXL1Q8IXJ9 1541 aa30.56■■■□□ 2.48
TPM1-204ENST00000334895 ANKLE2Q86XL3 938 aa30.55■■■□□ 2.48
TPM1-204ENST00000334895 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
TPM1-204ENST00000334895 CARD11Q9BXL7 1154 aa30.52■■■□□ 2.48
TPM1-204ENST00000334895 MED14O60244 1454 aa30.5■■■□□ 2.47
TPM1-204ENST00000334895 TMEM132EQ6IEE7 984 aa30.47■■■□□ 2.47
TPM1-204ENST00000334895 NPHP4O75161 1426 aaPredicted RBP30.47■■■□□ 2.47
TPM1-204ENST00000334895 DMRT2Q9Y5R5 561 aa30.47■■■□□ 2.47
TPM1-204ENST00000334895 USP47Q96K76 1375 aa30.46■■■□□ 2.47
TPM1-204ENST00000334895 BCANQ96GW7 911 aa30.45■■■□□ 2.47
TPM1-204ENST00000334895 METP08581 1390 aa30.43■■■□□ 2.46
TPM1-204ENST00000334895 DIP2AQ14689 1571 aa30.42■■■□□ 2.46
TPM1-204ENST00000334895 SLC26A8Q96RN1 970 aa30.42■■■□□ 2.46
TPM1-204ENST00000334895 HSPA5P11021 654 aaKnown RBP30.41■■■□□ 2.46
TPM1-204ENST00000334895 EIF4G2P78344 907 aaKnown RBP eCLIP30.41■■■□□ 2.46
TPM1-204ENST00000334895 HIRIP3Q9BW71 556 aaPredicted RBP30.39■■■□□ 2.46
TPM1-204ENST00000334895 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
TPM1-204ENST00000334895 TBX22Q9Y458 520 aa30.38■■■□□ 2.45
TPM1-204ENST00000334895 ARHGEF28Q8N1W1 1705 aaKnown RBP30.35■■■□□ 2.45
TPM1-204ENST00000334895 LRPPRCP42704 1394 aaKnown RBP30.34■■■□□ 2.45
TPM1-204ENST00000334895 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
TPM1-204ENST00000334895 TRAK1Q9UPV9 953 aa30.33■■■□□ 2.45
TPM1-204ENST00000334895 ST20-MTHFSA0A0A6YYL1 179 aa30.32■■■□□ 2.44
TPM1-204ENST00000334895 STK26Q9P289 416 aa30.31■■■□□ 2.44
TPM1-204ENST00000334895 KNDC1Q76NI1 1749 aa30.31■■■□□ 2.44
TPM1-204ENST00000334895 ABCC11Q96J66 1382 aa30.29■■■□□ 2.44
TPM1-204ENST00000334895 STRCP1A6NGW2 1772 aa30.29■■■□□ 2.44
TPM1-204ENST00000334895 EIF3AQ14152 1382 aaKnown RBP30.28■■■□□ 2.44
TPM1-204ENST00000334895 DLC1Q96QB1 1528 aa30.28■■■□□ 2.44
TPM1-204ENST00000334895 TECPR2O15040 1411 aa30.28■■■□□ 2.44
TPM1-204ENST00000334895 PIK3R4Q99570 1358 aa30.27■■■□□ 2.44
TPM1-204ENST00000334895 ZNF316A6NFI3 1004 aaPredicted RBP30.27■■■□□ 2.44
TPM1-204ENST00000334895 ZNF335Q9H4Z2 1342 aaPredicted RBP30.27■■■□□ 2.44
TPM1-204ENST00000334895 XRN1Q8IZH2 1706 aaKnown RBP30.27■■■□□ 2.44
TPM1-204ENST00000334895 CPS1P31327 1500 aa30.25■■■□□ 2.43
TPM1-204ENST00000334895 CHD2O14647 1828 aaKnown RBP30.25■■■□□ 2.43
TPM1-204ENST00000334895 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
TPM1-204ENST00000334895 TESK2Q96S53 571 aa30.23■■■□□ 2.43
TPM1-204ENST00000334895 QRICH2Q9H0J4 1663 aa30.22■■■□□ 2.43
TPM1-204ENST00000334895 CENPJQ9HC77 1338 aaPredicted RBP30.21■■■□□ 2.43
TPM1-204ENST00000334895 AMOTL2Q9Y2J4 779 aa30.21■■■□□ 2.43
TPM1-204ENST00000334895 ROBO2Q9HCK4 1378 aa30.2■■■□□ 2.43
TPM1-204ENST00000334895 PLEKHH1Q9ULM0 1364 aa30.19■■■□□ 2.42
TPM1-204ENST00000334895 PRAM1Q96QH2 718 aa30.18■■■□□ 2.42
TPM1-204ENST00000334895 NWD1Q149M9 1564 aa30.18■■■□□ 2.42
TPM1-204ENST00000334895 C11orf95C9JLR9 678 aaPredicted RBP30.18■■■□□ 2.42
TPM1-204ENST00000334895 FAM135BQ49AJ0 1406 aa30.17■■■□□ 2.42
TPM1-204ENST00000334895 PTCH1Q13635 1447 aa30.17■■■□□ 2.42
TPM1-204ENST00000334895 SIRT1Q96EB6 747 aa30.16■■■□□ 2.42
TPM1-204ENST00000334895 SBNO2Q9Y2G9 1366 aa30.16■■■□□ 2.42
TPM1-204ENST00000334895 WAPLQ7Z5K2 1190 aa30.15■■■□□ 2.42
TPM1-204ENST00000334895 KCNA6P17658 529 aa30.14■■■□□ 2.42
TPM1-204ENST00000334895 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
TPM1-204ENST00000334895 DISP3Q9P2K9 1392 aa30.12■■■□□ 2.41
TPM1-204ENST00000334895 POGKQ9P215 609 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms