RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
LRCH3-201ENST00000334859 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
LRCH3-201ENST00000334859 NEURL4Q96JN8 1562 aa23.61■■□□□ 1.37
LRCH3-201ENST00000334859 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
LRCH3-201ENST00000334859 KIF1BO60333 1816 aa23.61■■□□□ 1.37
LRCH3-201ENST00000334859 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
LRCH3-201ENST00000334859 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
LRCH3-201ENST00000334859 MAP3K4Q9Y6R4 1608 aa23.6■■□□□ 1.37
LRCH3-201ENST00000334859 ABCA6Q8N139 1617 aa23.6■■□□□ 1.37
LRCH3-201ENST00000334859 INSRP06213 1382 aa23.59■■□□□ 1.37
LRCH3-201ENST00000334859 MYOM2P54296 1465 aa23.59■■□□□ 1.37
LRCH3-201ENST00000334859 MSH5O43196 834 aa23.58■■□□□ 1.37
LRCH3-201ENST00000334859 MYOM1P52179 1685 aa23.58■■□□□ 1.37
LRCH3-201ENST00000334859 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.36
LRCH3-201ENST00000334859 CFAP70Q5T0N1 1121 aa23.57■■□□□ 1.36
LRCH3-201ENST00000334859 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
LRCH3-201ENST00000334859 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
LRCH3-201ENST00000334859 AMER1Q5JTC6 1135 aaPredicted RBP23.56■■□□□ 1.36
LRCH3-201ENST00000334859 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
LRCH3-201ENST00000334859 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
LRCH3-201ENST00000334859 PPP2R1AP30153 589 aa23.55■■□□□ 1.36
LRCH3-201ENST00000334859 CFAP74Q9C0B2 1584 aa23.54■■□□□ 1.36
LRCH3-201ENST00000334859 IFT172Q9UG01 1749 aa23.54■■□□□ 1.36
LRCH3-201ENST00000334859 CD109Q6YHK3 1445 aa23.53■■□□□ 1.36
LRCH3-201ENST00000334859 POGZQ7Z3K3 1410 aa23.53■■□□□ 1.36
LRCH3-201ENST00000334859 LMTK2Q8IWU2 1503 aa23.53■■□□□ 1.36
LRCH3-201ENST00000334859 WDR43Q15061 677 aaKnown RBP eCLIP23.52■■□□□ 1.36
LRCH3-201ENST00000334859 ADAMTS8Q9UP79 889 aa23.52■■□□□ 1.36
LRCH3-201ENST00000334859 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
LRCH3-201ENST00000334859 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
LRCH3-201ENST00000334859 EXOC6Q8TAG9 804 aa23.5■■□□□ 1.35
LRCH3-201ENST00000334859 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
LRCH3-201ENST00000334859 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
LRCH3-201ENST00000334859 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
LRCH3-201ENST00000334859 ERICH6Q7L0X2 663 aa23.48■■□□□ 1.35
LRCH3-201ENST00000334859 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
LRCH3-201ENST00000334859 NOS1P29475 1434 aa23.47■■□□□ 1.35
LRCH3-201ENST00000334859 GGT6Q6P531 493 aa23.47■■□□□ 1.35
LRCH3-201ENST00000334859 NPATQ14207 1427 aa23.46■■□□□ 1.35
LRCH3-201ENST00000334859 CFAP65Q6ZU64 1925 aaKnown RBP23.46■■□□□ 1.35
LRCH3-201ENST00000334859 SLC24A1O60721 1099 aa23.45■■□□□ 1.35
LRCH3-201ENST00000334859 PIK3C2GO75747 1445 aa23.45■■□□□ 1.34
LRCH3-201ENST00000334859 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
LRCH3-201ENST00000334859 NRXN1Q9ULB1 1477 aa23.45■■□□□ 1.34
LRCH3-201ENST00000334859 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
LRCH3-201ENST00000334859 MYO3AQ8NEV4 1616 aa23.41■■□□□ 1.34
LRCH3-201ENST00000334859 PLIN1O60240 522 aa23.41■■□□□ 1.34
LRCH3-201ENST00000334859 PLEKHH1Q9ULM0 1364 aa23.4■■□□□ 1.34
LRCH3-201ENST00000334859 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.33
LRCH3-201ENST00000334859 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
LRCH3-201ENST00000334859 PPLO60437 1756 aa23.39■■□□□ 1.33
LRCH3-201ENST00000334859 ABCC3O15438 1527 aa23.38■■□□□ 1.33
LRCH3-201ENST00000334859 SBNO2Q9Y2G9 1366 aa23.37■■□□□ 1.33
LRCH3-201ENST00000334859 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
LRCH3-201ENST00000334859 CARD14Q9BXL6 1004 aa23.35■■□□□ 1.33
LRCH3-201ENST00000334859 RAPGEF3O95398 923 aa23.35■■□□□ 1.33
LRCH3-201ENST00000334859 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
LRCH3-201ENST00000334859 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
LRCH3-201ENST00000334859 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
LRCH3-201ENST00000334859 GOLGA2Q08379 1002 aa23.33■■□□□ 1.32
LRCH3-201ENST00000334859 NEO1Q92859 1461 aa23.32■■□□□ 1.32
LRCH3-201ENST00000334859 CRBNQ96SW2 442 aa23.32■■□□□ 1.32
LRCH3-201ENST00000334859 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
LRCH3-201ENST00000334859 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
LRCH3-201ENST00000334859 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
LRCH3-201ENST00000334859 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
LRCH3-201ENST00000334859 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
LRCH3-201ENST00000334859 ADGRB1O14514 1584 aa23.3■■□□□ 1.32
LRCH3-201ENST00000334859 SIGLEC1Q9BZZ2 1709 aa23.29■■□□□ 1.32
LRCH3-201ENST00000334859 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
LRCH3-201ENST00000334859 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
LRCH3-201ENST00000334859 ANP32AP39687 249 aaKnown RBP23.28■■□□□ 1.32
LRCH3-201ENST00000334859 NSD3Q9BZ95 1437 aa23.28■■□□□ 1.32
LRCH3-201ENST00000334859 APAF1O14727 1248 aa23.26■■□□□ 1.31
LRCH3-201ENST00000334859 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
LRCH3-201ENST00000334859 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
LRCH3-201ENST00000334859 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
LRCH3-201ENST00000334859 GLI2P10070 1586 aa23.24■■□□□ 1.31
LRCH3-201ENST00000334859 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
LRCH3-201ENST00000334859 NOP58Q9Y2X3 529 aaKnown RBP23.24■■□□□ 1.31
LRCH3-201ENST00000334859 PIK3C2BO00750 1634 aa23.24■■□□□ 1.31
LRCH3-201ENST00000334859 SLFN5Q08AF3 891 aa23.23■■□□□ 1.31
LRCH3-201ENST00000334859 MORC1Q86VD1 984 aa23.22■■□□□ 1.31
LRCH3-201ENST00000334859 RICTORQ6R327 1708 aa23.21■■□□□ 1.31
LRCH3-201ENST00000334859 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
LRCH3-201ENST00000334859 NEXMIFQ5QGS0 1516 aa23.21■■□□□ 1.31
LRCH3-201ENST00000334859 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
LRCH3-201ENST00000334859 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.2■■□□□ 1.3
LRCH3-201ENST00000334859 POLR3AO14802 1390 aaPredicted RBP23.19■■□□□ 1.3
LRCH3-201ENST00000334859 YEATS2Q9ULM3 1422 aa23.18■■□□□ 1.3
LRCH3-201ENST00000334859 ARHGEF28Q8N1W1 1705 aaKnown RBP23.18■■□□□ 1.3
LRCH3-201ENST00000334859 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
LRCH3-201ENST00000334859 SPINK5Q9NQ38 1064 aaPredicted RBP23.17■■□□□ 1.3
LRCH3-201ENST00000334859 IPO9Q96P70 1041 aaKnown RBP23.16■■□□□ 1.3
LRCH3-201ENST00000334859 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
LRCH3-201ENST00000334859 E9PSI1 815 aa23.15■■□□□ 1.3
LRCH3-201ENST00000334859 MS4A1P11836 297 aa23.15■■□□□ 1.3
LRCH3-201ENST00000334859 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
LRCH3-201ENST00000334859 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
LRCH3-201ENST00000334859 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms