RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RPGRIP1LQ68CZ1 1315 aa25.35■■□□□ 1.65
CHGA-202ENST00000334654 RIMS2Q9UQ26 1411 aa25.34■■□□□ 1.65
CHGA-202ENST00000334654 HSPA2P54652 639 aa25.34■■□□□ 1.65
CHGA-202ENST00000334654 LTKP29376 864 aa25.33■■□□□ 1.65
CHGA-202ENST00000334654 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
CHGA-202ENST00000334654 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
CHGA-202ENST00000334654 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
CHGA-202ENST00000334654 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
CHGA-202ENST00000334654 TIMELESSQ9UNS1 1208 aa25.3■■□□□ 1.64
CHGA-202ENST00000334654 TXNDC2Q86VQ3 553 aa25.27■■□□□ 1.64
CHGA-202ENST00000334654 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.27■■□□□ 1.64
CHGA-202ENST00000334654 MYOM2P54296 1465 aa25.26■■□□□ 1.63
CHGA-202ENST00000334654 ADGRF5Q8IZF2 1346 aa25.26■■□□□ 1.63
CHGA-202ENST00000334654 KDM2AQ9Y2K7 1162 aa25.26■■□□□ 1.63
CHGA-202ENST00000334654 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
CHGA-202ENST00000334654 ANKLE2Q86XL3 938 aa25.25■■□□□ 1.63
CHGA-202ENST00000334654 NRXN1Q9ULB1 1477 aa25.25■■□□□ 1.63
CHGA-202ENST00000334654 STRCQ7RTU9 1775 aa25.25■■□□□ 1.63
CHGA-202ENST00000334654 VGFO15240 615 aaPredicted RBP25.24■■□□□ 1.63
CHGA-202ENST00000334654 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
CHGA-202ENST00000334654 STAC3Q96MF2 364 aa25.24■■□□□ 1.63
CHGA-202ENST00000334654 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
CHGA-202ENST00000334654 POLR1AO95602 1720 aaPredicted RBP25.24■■□□□ 1.63
CHGA-202ENST00000334654 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
CHGA-202ENST00000334654 MED14O60244 1454 aa25.2■■□□□ 1.63
CHGA-202ENST00000334654 PLEKHG1Q9ULL1 1385 aa25.2■■□□□ 1.62
CHGA-202ENST00000334654 PPP1R15AO75807 674 aaPredicted RBP25.2■■□□□ 1.62
CHGA-202ENST00000334654 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
CHGA-202ENST00000334654 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
CHGA-202ENST00000334654 PRAG1Q86YV5 1406 aa25.18■■□□□ 1.62
CHGA-202ENST00000334654 NBPF8Q3BBV2 869 aa25.18■■□□□ 1.62
CHGA-202ENST00000334654 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
CHGA-202ENST00000334654 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
CHGA-202ENST00000334654 IQGAP1P46940 1657 aa25.15■■□□□ 1.62
CHGA-202ENST00000334654 NPHP4O75161 1426 aaPredicted RBP25.14■■□□□ 1.62
CHGA-202ENST00000334654 ADAMTS13Q76LX8 1427 aa25.14■■□□□ 1.62
CHGA-202ENST00000334654 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
CHGA-202ENST00000334654 ALKQ9UM73 1620 aa25.11■■□□□ 1.61
CHGA-202ENST00000334654 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
CHGA-202ENST00000334654 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
CHGA-202ENST00000334654 KIAA1210Q9ULL0 1709 aa25.08■■□□□ 1.61
CHGA-202ENST00000334654 TRPM1Q7Z4N2 1603 aa25.08■■□□□ 1.61
CHGA-202ENST00000334654 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.6
CHGA-202ENST00000334654 TBX22Q9Y458 520 aa25.07■■□□□ 1.6
CHGA-202ENST00000334654 BCANQ96GW7 911 aa25.06■■□□□ 1.6
CHGA-202ENST00000334654 LAMC1P11047 1609 aa25.05■■□□□ 1.6
CHGA-202ENST00000334654 NBPF1Q3BBV0 1214 aa25.05■■□□□ 1.6
CHGA-202ENST00000334654 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
CHGA-202ENST00000334654 DIP2AQ14689 1571 aa25.04■■□□□ 1.6
CHGA-202ENST00000334654 METP08581 1390 aa25.04■■□□□ 1.6
CHGA-202ENST00000334654 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
CHGA-202ENST00000334654 RALGAPBQ86X10 1494 aa25.02■■□□□ 1.6
CHGA-202ENST00000334654 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
CHGA-202ENST00000334654 TMEM132EQ6IEE7 984 aa25■■□□□ 1.59
CHGA-202ENST00000334654 DMRT2Q9Y5R5 561 aa24.99■■□□□ 1.59
CHGA-202ENST00000334654 PTPRUQ92729 1446 aa24.98■■□□□ 1.59
CHGA-202ENST00000334654 GPRASP1Q5JY77 1395 aa24.98■■□□□ 1.59
CHGA-202ENST00000334654 CHD2O14647 1828 aaKnown RBP24.97■■□□□ 1.59
CHGA-202ENST00000334654 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
CHGA-202ENST00000334654 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
CHGA-202ENST00000334654 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
CHGA-202ENST00000334654 STRCP1A6NGW2 1772 aa24.92■■□□□ 1.58
CHGA-202ENST00000334654 LRPPRCP42704 1394 aaKnown RBP24.91■■□□□ 1.58
CHGA-202ENST00000334654 XRN1Q8IZH2 1706 aaKnown RBP24.91■■□□□ 1.58
CHGA-202ENST00000334654 NWD1Q149M9 1564 aa24.9■■□□□ 1.58
CHGA-202ENST00000334654 ABCC11Q96J66 1382 aa24.9■■□□□ 1.58
CHGA-202ENST00000334654 KCNA6P17658 529 aa24.89■■□□□ 1.58
CHGA-202ENST00000334654 AMOTL2Q9Y2J4 779 aa24.89■■□□□ 1.58
CHGA-202ENST00000334654 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.57
CHGA-202ENST00000334654 STK26Q9P289 416 aa24.88■■□□□ 1.57
CHGA-202ENST00000334654 TECPR2O15040 1411 aa24.87■■□□□ 1.57
CHGA-202ENST00000334654 KNDC1Q76NI1 1749 aa24.87■■□□□ 1.57
CHGA-202ENST00000334654 ZNF335Q9H4Z2 1342 aaPredicted RBP24.87■■□□□ 1.57
CHGA-202ENST00000334654 TRAK1Q9UPV9 953 aa24.85■■□□□ 1.57
CHGA-202ENST00000334654 CPS1P31327 1500 aa24.84■■□□□ 1.57
CHGA-202ENST00000334654 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
CHGA-202ENST00000334654 ARHGEF28Q8N1W1 1705 aaKnown RBP24.83■■□□□ 1.57
CHGA-202ENST00000334654 ROBO2Q9HCK4 1378 aa24.83■■□□□ 1.57
CHGA-202ENST00000334654 SIRT1Q96EB6 747 aa24.82■■□□□ 1.56
CHGA-202ENST00000334654 PTCH1Q13635 1447 aa24.81■■□□□ 1.56
CHGA-202ENST00000334654 NKTRP30414 1462 aaKnown RBP24.79■■□□□ 1.56
CHGA-202ENST00000334654 FAM135BQ49AJ0 1406 aa24.79■■□□□ 1.56
CHGA-202ENST00000334654 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
CHGA-202ENST00000334654 LTBP4Q8N2S1 1624 aa24.78■■□□□ 1.56
CHGA-202ENST00000334654 USP47Q96K76 1375 aa24.78■■□□□ 1.56
CHGA-202ENST00000334654 WAPLQ7Z5K2 1190 aa24.77■■□□□ 1.56
CHGA-202ENST00000334654 PRAM1Q96QH2 718 aa24.76■■□□□ 1.55
CHGA-202ENST00000334654 XIRP1Q702N8 1843 aaKnown RBP24.74■■□□□ 1.55
CHGA-202ENST00000334654 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
CHGA-202ENST00000334654 PROSER2Q86WR7 435 aaPredicted RBP24.73■■□□□ 1.55
CHGA-202ENST00000334654 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
CHGA-202ENST00000334654 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
CHGA-202ENST00000334654 HSPA5P11021 654 aaKnown RBP24.72■■□□□ 1.55
CHGA-202ENST00000334654 RBM33Q96EV2 1170 aaKnown RBP24.72■■□□□ 1.55
CHGA-202ENST00000334654 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
CHGA-202ENST00000334654 CENPJQ9HC77 1338 aaPredicted RBP24.71■■□□□ 1.55
CHGA-202ENST00000334654 EIF3AQ14152 1382 aaKnown RBP24.71■■□□□ 1.55
CHGA-202ENST00000334654 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
CHGA-202ENST00000334654 POGKQ9P215 609 aa24.7■■□□□ 1.54
CHGA-202ENST00000334654 TMEM94Q12767 1356 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms