RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 KIAA1210Q9ULL0 1709 aa31.07■■■□□ 2.56
NDEL1-201ENST00000334527 MROH1Q8NDA8 1641 aa31.07■■■□□ 2.56
NDEL1-201ENST00000334527 EIF3AQ14152 1382 aaKnown RBP31.07■■■□□ 2.56
NDEL1-201ENST00000334527 PPP2R1AP30153 589 aa31.06■■■□□ 2.56
NDEL1-201ENST00000334527 AMER1Q5JTC6 1135 aaPredicted RBP31.06■■■□□ 2.56
NDEL1-201ENST00000334527 NEURL4Q96JN8 1562 aa31.06■■■□□ 2.56
NDEL1-201ENST00000334527 ADAMTS8Q9UP79 889 aa31.05■■■□□ 2.56
NDEL1-201ENST00000334527 MYOM1P52179 1685 aa31.03■■■□□ 2.56
NDEL1-201ENST00000334527 ASXL2Q76L83 1435 aa31.03■■■□□ 2.56
NDEL1-201ENST00000334527 UGGT1Q9NYU2 1555 aa31.03■■■□□ 2.56
NDEL1-201ENST00000334527 ASXL1Q8IXJ9 1541 aa31.01■■■□□ 2.55
NDEL1-201ENST00000334527 MAP3K4Q9Y6R4 1608 aa31■■■□□ 2.55
NDEL1-201ENST00000334527 KDM5AP29375 1690 aaKnown RBP30.99■■■□□ 2.55
NDEL1-201ENST00000334527 MYOM2P54296 1465 aa30.98■■■□□ 2.55
NDEL1-201ENST00000334527 KIF1BO60333 1816 aa30.98■■■□□ 2.55
NDEL1-201ENST00000334527 EFCAB6Q5THR3 1501 aa30.98■■■□□ 2.55
NDEL1-201ENST00000334527 WDR43Q15061 677 aaKnown RBP eCLIP30.98■■■□□ 2.55
NDEL1-201ENST00000334527 ABCA6Q8N139 1617 aa30.98■■■□□ 2.55
NDEL1-201ENST00000334527 KIDINS220Q9ULH0 1771 aa30.97■■■□□ 2.55
NDEL1-201ENST00000334527 CFAP70Q5T0N1 1121 aa30.97■■■□□ 2.55
NDEL1-201ENST00000334527 ADGRF5Q8IZF2 1346 aa30.94■■■□□ 2.54
NDEL1-201ENST00000334527 PPRC1Q5VV67 1664 aaKnown RBP30.93■■■□□ 2.54
NDEL1-201ENST00000334527 PLIN1O60240 522 aa30.93■■■□□ 2.54
NDEL1-201ENST00000334527 NPC1L1Q9UHC9 1359 aa30.92■■■□□ 2.54
NDEL1-201ENST00000334527 IFT172Q9UG01 1749 aa30.92■■■□□ 2.54
NDEL1-201ENST00000334527 PIK3C2GO75747 1445 aa30.92■■■□□ 2.54
NDEL1-201ENST00000334527 MROH2AA6NES4 1674 aa30.91■■■□□ 2.54
NDEL1-201ENST00000334527 ZNF518AQ6AHZ1 1483 aa30.9■■■□□ 2.54
NDEL1-201ENST00000334527 PLEKHH1Q9ULM0 1364 aa30.89■■■□□ 2.54
NDEL1-201ENST00000334527 ERVK-7P63135 1459 aa30.89■■■□□ 2.54
NDEL1-201ENST00000334527 SLC24A1O60721 1099 aa30.88■■■□□ 2.53
NDEL1-201ENST00000334527 LMTK2Q8IWU2 1503 aa30.88■■■□□ 2.53
NDEL1-201ENST00000334527 NOP58Q9Y2X3 529 aaKnown RBP30.87■■■□□ 2.53
NDEL1-201ENST00000334527 ANP32AP39687 249 aaKnown RBP30.86■■■□□ 2.53
NDEL1-201ENST00000334527 TCERG1O14776 1098 aaKnown RBP30.84■■■□□ 2.53
NDEL1-201ENST00000334527 CRBNQ96SW2 442 aa30.84■■■□□ 2.53
NDEL1-201ENST00000334527 NRXN1Q9ULB1 1477 aa30.83■■■□□ 2.53
NDEL1-201ENST00000334527 ZNF521Q96K83 1311 aa30.81■■■□□ 2.52
NDEL1-201ENST00000334527 DUSP27Q5VZP5 1158 aa30.81■■■□□ 2.52
NDEL1-201ENST00000334527 ADGRB3O60242 1522 aa30.8■■■□□ 2.52
NDEL1-201ENST00000334527 MYO3AQ8NEV4 1616 aa30.8■■■□□ 2.52
NDEL1-201ENST00000334527 NPM1P06748 294 aaKnown RBP eCLIP30.79■■■□□ 2.52
NDEL1-201ENST00000334527 NOS1P29475 1434 aa30.79■■■□□ 2.52
NDEL1-201ENST00000334527 GOLGA2Q08379 1002 aa30.79■■■□□ 2.52
NDEL1-201ENST00000334527 IPO9Q96P70 1041 aaKnown RBP30.78■■■□□ 2.52
NDEL1-201ENST00000334527 PAK3O75914 559 aaPredicted RBP30.78■■■□□ 2.52
NDEL1-201ENST00000334527 CHGAP10645 457 aaKnown RBP30.78■■■□□ 2.52
NDEL1-201ENST00000334527 CARD14Q9BXL6 1004 aa30.77■■■□□ 2.52
NDEL1-201ENST00000334527 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.51
NDEL1-201ENST00000334527 POGZQ7Z3K3 1410 aa30.76■■■□□ 2.51
NDEL1-201ENST00000334527 C20orf194Q5TEA3 1177 aa30.75■■■□□ 2.51
NDEL1-201ENST00000334527 CCDC146Q8IYE0 955 aa30.75■■■□□ 2.51
NDEL1-201ENST00000334527 SBNO2Q9Y2G9 1366 aa30.74■■■□□ 2.51
NDEL1-201ENST00000334527 CD109Q6YHK3 1445 aa30.74■■■□□ 2.51
NDEL1-201ENST00000334527 SETBP1Q9Y6X0 1596 aa30.74■■■□□ 2.51
NDEL1-201ENST00000334527 NPATQ14207 1427 aa30.74■■■□□ 2.51
NDEL1-201ENST00000334527 FRMPD1Q5SYB0 1578 aa30.73■■■□□ 2.51
NDEL1-201ENST00000334527 MS4A1P11836 297 aa30.72■■■□□ 2.51
NDEL1-201ENST00000334527 CENPJQ9HC77 1338 aaPredicted RBP30.72■■■□□ 2.51
NDEL1-201ENST00000334527 CFAP65Q6ZU64 1925 aaKnown RBP30.71■■■□□ 2.51
NDEL1-201ENST00000334527 GGT6Q6P531 493 aa30.71■■■□□ 2.51
NDEL1-201ENST00000334527 MLH3Q9UHC1 1453 aa30.71■■■□□ 2.51
NDEL1-201ENST00000334527 PPLO60437 1756 aa30.7■■■□□ 2.51
NDEL1-201ENST00000334527 PDE4AP27815 886 aa30.7■■■□□ 2.51
NDEL1-201ENST00000334527 SLFN5Q08AF3 891 aa30.7■■■□□ 2.51
NDEL1-201ENST00000334527 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
NDEL1-201ENST00000334527 APAF1O14727 1248 aa30.68■■■□□ 2.5
NDEL1-201ENST00000334527 TRAK1Q9UPV9 953 aa30.67■■■□□ 2.5
NDEL1-201ENST00000334527 ZBTB47Q9UFB7 747 aaPredicted RBP30.66■■■□□ 2.5
NDEL1-201ENST00000334527 BACH2Q9BYV9 841 aa30.65■■■□□ 2.5
NDEL1-201ENST00000334527 C14orf93Q9H972 538 aaKnown RBP30.64■■■□□ 2.5
NDEL1-201ENST00000334527 ZC3H13Q5T200 1668 aaKnown RBP30.64■■■□□ 2.5
NDEL1-201ENST00000334527 QRICH2Q9H0J4 1663 aa30.64■■■□□ 2.5
NDEL1-201ENST00000334527 TRMT2AQ8IZ69 625 aaKnown RBP30.64■■■□□ 2.5
NDEL1-201ENST00000334527 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.63■■■□□ 2.49
NDEL1-201ENST00000334527 NPM2Q86SE8 214 aaKnown RBP30.62■■■□□ 2.49
NDEL1-201ENST00000334527 ADGRB1O14514 1584 aa30.62■■■□□ 2.49
NDEL1-201ENST00000334527 ABCC3O15438 1527 aa30.62■■■□□ 2.49
NDEL1-201ENST00000334527 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
NDEL1-201ENST00000334527 SPINK5Q9NQ38 1064 aaPredicted RBP30.6■■■□□ 2.49
NDEL1-201ENST00000334527 NSD3Q9BZ95 1437 aa30.6■■■□□ 2.49
NDEL1-201ENST00000334527 SKAP1Q86WV1 359 aa30.59■■■□□ 2.49
NDEL1-201ENST00000334527 RPGRIP1LQ68CZ1 1315 aa30.59■■■□□ 2.49
NDEL1-201ENST00000334527 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
NDEL1-201ENST00000334527 TMEM132EQ6IEE7 984 aa30.58■■■□□ 2.49
NDEL1-201ENST00000334527 KDM2BQ8NHM5 1336 aa30.58■■■□□ 2.49
NDEL1-201ENST00000334527 POLR3AO14802 1390 aaPredicted RBP30.58■■■□□ 2.49
NDEL1-201ENST00000334527 CAMSAP1Q5T5Y3 1602 aa30.56■■■□□ 2.48
NDEL1-201ENST00000334527 E9PSI1 815 aa30.55■■■□□ 2.48
NDEL1-201ENST00000334527 NBR1Q14596 966 aa30.55■■■□□ 2.48
NDEL1-201ENST00000334527 SLC12A5Q9H2X9 1139 aa30.55■■■□□ 2.48
NDEL1-201ENST00000334527 MORC1Q86VD1 984 aa30.54■■■□□ 2.48
NDEL1-201ENST00000334527 NGEFQ8N5V2 710 aa30.54■■■□□ 2.48
NDEL1-201ENST00000334527 CENPQQ7L2Z9 268 aaPredicted RBP30.54■■■□□ 2.48
NDEL1-201ENST00000334527 SIGLEC1Q9BZZ2 1709 aa30.53■■■□□ 2.48
NDEL1-201ENST00000334527 RAPGEF3O95398 923 aa30.51■■■□□ 2.47
NDEL1-201ENST00000334527 DMRT2Q9Y5R5 561 aa30.5■■■□□ 2.47
NDEL1-201ENST00000334527 TNNT2P45379 298 aaPredicted RBP30.5■■■□□ 2.47
NDEL1-201ENST00000334527 SHPRHQ149N8 1683 aa30.49■■■□□ 2.47
NDEL1-201ENST00000334527 GLI2P10070 1586 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms