RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LAMC1P11047 1609 aa16.32■□□□□ 0.2
VPS33B-201ENST00000333371 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
VPS33B-201ENST00000333371 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
VPS33B-201ENST00000333371 TET3O43151 1660 aa16.32■□□□□ 0.2
VPS33B-201ENST00000333371 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
VPS33B-201ENST00000333371 TRPM2O94759 1503 aa16.3■□□□□ 0.2
VPS33B-201ENST00000333371 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
VPS33B-201ENST00000333371 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
VPS33B-201ENST00000333371 WASHC2CQ9Y4E1 1318 aa16.28■□□□□ 0.2
VPS33B-201ENST00000333371 CEP152O94986 1710 aa16.28■□□□□ 0.2
VPS33B-201ENST00000333371 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
VPS33B-201ENST00000333371 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
VPS33B-201ENST00000333371 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
VPS33B-201ENST00000333371 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
VPS33B-201ENST00000333371 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
VPS33B-201ENST00000333371 ZMYM4Q5VZL5 1548 aa16.26■□□□□ 0.19
VPS33B-201ENST00000333371 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
VPS33B-201ENST00000333371 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
VPS33B-201ENST00000333371 PTPRTO14522 1441 aa16.26■□□□□ 0.19
VPS33B-201ENST00000333371 CLTCL1P53675 1640 aa16.26■□□□□ 0.19
VPS33B-201ENST00000333371 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
VPS33B-201ENST00000333371 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
VPS33B-201ENST00000333371 CCDC146Q8IYE0 955 aa16.24■□□□□ 0.19
VPS33B-201ENST00000333371 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
VPS33B-201ENST00000333371 MROH1Q8NDA8 1641 aa16.24■□□□□ 0.19
VPS33B-201ENST00000333371 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS33B-201ENST00000333371 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
VPS33B-201ENST00000333371 HECW2Q9P2P5 1572 aa16.22■□□□□ 0.19
VPS33B-201ENST00000333371 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
VPS33B-201ENST00000333371 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
VPS33B-201ENST00000333371 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
VPS33B-201ENST00000333371 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
VPS33B-201ENST00000333371 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
VPS33B-201ENST00000333371 MS4A1P11836 297 aa16.19■□□□□ 0.18
VPS33B-201ENST00000333371 KIF1BO60333 1816 aa16.19■□□□□ 0.18
VPS33B-201ENST00000333371 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
VPS33B-201ENST00000333371 GGT6Q6P531 493 aa16.19■□□□□ 0.18
VPS33B-201ENST00000333371 NEO1Q92859 1461 aa16.18■□□□□ 0.18
VPS33B-201ENST00000333371 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-201ENST00000333371 MYOM1P52179 1685 aa16.18■□□□□ 0.18
VPS33B-201ENST00000333371 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
VPS33B-201ENST00000333371 INSRP06213 1382 aa16.17■□□□□ 0.18
VPS33B-201ENST00000333371 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
VPS33B-201ENST00000333371 UGGT1Q9NYU2 1555 aa16.16■□□□□ 0.18
VPS33B-201ENST00000333371 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
VPS33B-201ENST00000333371 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
VPS33B-201ENST00000333371 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
VPS33B-201ENST00000333371 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
VPS33B-201ENST00000333371 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 ABCA6Q8N139 1617 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 APAF1O14727 1248 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 SYNMO15061 1565 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
VPS33B-201ENST00000333371 FRMPD1Q5SYB0 1578 aa16.14■□□□□ 0.17
VPS33B-201ENST00000333371 NEFMP07197 916 aa16.14■□□□□ 0.17
VPS33B-201ENST00000333371 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
VPS33B-201ENST00000333371 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
VPS33B-201ENST00000333371 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
VPS33B-201ENST00000333371 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
VPS33B-201ENST00000333371 ADGRF5Q8IZF2 1346 aa16.12■□□□□ 0.17
VPS33B-201ENST00000333371 BCAR3O75815 825 aa16.12■□□□□ 0.17
VPS33B-201ENST00000333371 RGS3P49796 1198 aa16.11■□□□□ 0.17
VPS33B-201ENST00000333371 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
VPS33B-201ENST00000333371 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
VPS33B-201ENST00000333371 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
VPS33B-201ENST00000333371 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
VPS33B-201ENST00000333371 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
VPS33B-201ENST00000333371 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
VPS33B-201ENST00000333371 MROH2AA6NES4 1674 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 MYOM2P54296 1465 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 NPATQ14207 1427 aa16.09■□□□□ 0.17
VPS33B-201ENST00000333371 RICTORQ6R327 1708 aa16.08■□□□□ 0.17
VPS33B-201ENST00000333371 CENPQQ7L2Z9 268 aaPredicted RBP16.08■□□□□ 0.16
VPS33B-201ENST00000333371 DIP2CQ9Y2E4 1556 aa16.08■□□□□ 0.16
VPS33B-201ENST00000333371 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
VPS33B-201ENST00000333371 ABCC3O15438 1527 aa16.07■□□□□ 0.16
VPS33B-201ENST00000333371 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-201ENST00000333371 IFT172Q9UG01 1749 aa16.07■□□□□ 0.16
VPS33B-201ENST00000333371 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
VPS33B-201ENST00000333371 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
VPS33B-201ENST00000333371 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
VPS33B-201ENST00000333371 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
VPS33B-201ENST00000333371 GLI2P10070 1586 aa16.05■□□□□ 0.16
VPS33B-201ENST00000333371 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
VPS33B-201ENST00000333371 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
VPS33B-201ENST00000333371 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
VPS33B-201ENST00000333371 NOS1P29475 1434 aa16.04■□□□□ 0.16
VPS33B-201ENST00000333371 NKTRP30414 1462 aaKnown RBP16.03■□□□□ 0.16
VPS33B-201ENST00000333371 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
VPS33B-201ENST00000333371 TSPOAP1O95153 1857 aa16.02■□□□□ 0.16
VPS33B-201ENST00000333371 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
VPS33B-201ENST00000333371 YEATS2Q9ULM3 1422 aa16.02■□□□□ 0.16
VPS33B-201ENST00000333371 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms