RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 WDR7Q9Y4E6 1490 aa30.76■■■□□ 2.51
TSKU-201ENST00000333090 BRPF3Q9ULD4 1205 aa30.75■■■□□ 2.51
TSKU-201ENST00000333090 AMER1Q5JTC6 1135 aaPredicted RBP30.74■■■□□ 2.51
TSKU-201ENST00000333090 IQGAP3Q86VI3 1631 aa30.71■■■□□ 2.51
TSKU-201ENST00000333090 CCDC146Q8IYE0 955 aa30.71■■■□□ 2.51
TSKU-201ENST00000333090 FRAT1Q92837 279 aaPredicted RBP30.71■■■□□ 2.51
TSKU-201ENST00000333090 ABCC2Q92887 1545 aa30.7■■■□□ 2.51
TSKU-201ENST00000333090 SLFN5Q08AF3 891 aa30.7■■■□□ 2.51
TSKU-201ENST00000333090 AFAP1Q8N556 730 aa30.7■■■□□ 2.5
TSKU-201ENST00000333090 SHROOM2Q13796 1616 aa30.69■■■□□ 2.5
TSKU-201ENST00000333090 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
TSKU-201ENST00000333090 ATP10AO60312 1499 aa30.66■■■□□ 2.5
TSKU-201ENST00000333090 RNF17Q9BXT8 1623 aaKnown RBP30.65■■■□□ 2.5
TSKU-201ENST00000333090 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
TSKU-201ENST00000333090 SPINK5Q9NQ38 1064 aaPredicted RBP30.64■■■□□ 2.5
TSKU-201ENST00000333090 CDCA8Q53HL2 280 aa30.63■■■□□ 2.49
TSKU-201ENST00000333090 APAF1O14727 1248 aa30.62■■■□□ 2.49
TSKU-201ENST00000333090 FRAT2O75474 233 aaPredicted RBP30.62■■■□□ 2.49
TSKU-201ENST00000333090 BCAR3O75815 825 aa30.62■■■□□ 2.49
TSKU-201ENST00000333090 EFCAB2Q5VUJ9 269 aa30.62■■■□□ 2.49
TSKU-201ENST00000333090 PRKCSHP14314 528 aaPredicted RBP30.6■■■□□ 2.49
TSKU-201ENST00000333090 TRMT2AQ8IZ69 625 aaKnown RBP30.6■■■□□ 2.49
TSKU-201ENST00000333090 PLXNC1O60486 1568 aa30.59■■■□□ 2.49
TSKU-201ENST00000333090 ASXL1Q8IXJ9 1541 aa30.59■■■□□ 2.49
TSKU-201ENST00000333090 PIK3C2GO75747 1445 aa30.59■■■□□ 2.49
TSKU-201ENST00000333090 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.58■■■□□ 2.49
TSKU-201ENST00000333090 DUOX2Q9NRD8 1548 aa30.58■■■□□ 2.49
TSKU-201ENST00000333090 CLASP1Q7Z460 1538 aa30.58■■■□□ 2.49
TSKU-201ENST00000333090 NKTRP30414 1462 aaKnown RBP30.57■■■□□ 2.48
TSKU-201ENST00000333090 PLCH2O75038 1416 aa30.57■■■□□ 2.48
TSKU-201ENST00000333090 EIF3AQ14152 1382 aaKnown RBP30.57■■■□□ 2.48
TSKU-201ENST00000333090 ZCCHC11Q5TAX3 1644 aaKnown RBP30.56■■■□□ 2.48
TSKU-201ENST00000333090 SYNMO15061 1565 aa30.56■■■□□ 2.48
TSKU-201ENST00000333090 MADDQ8WXG6 1647 aa30.53■■■□□ 2.48
TSKU-201ENST00000333090 IQGAP1P46940 1657 aa30.53■■■□□ 2.48
TSKU-201ENST00000333090 SCAF11Q99590 1463 aaKnown RBP30.53■■■□□ 2.48
TSKU-201ENST00000333090 IGHDP01880 384 aa30.53■■■□□ 2.48
TSKU-201ENST00000333090 E9PSI1 815 aa30.52■■■□□ 2.48
TSKU-201ENST00000333090 SPAG9O60271 1321 aaKnown RBP30.51■■■□□ 2.48
TSKU-201ENST00000333090 DMRT2Q9Y5R5 561 aa30.5■■■□□ 2.47
TSKU-201ENST00000333090 NPC1L1Q9UHC9 1359 aa30.47■■■□□ 2.47
TSKU-201ENST00000333090 CANXP27824 592 aaKnown RBP30.45■■■□□ 2.47
TSKU-201ENST00000333090 USP19O94966 1318 aa30.44■■■□□ 2.46
TSKU-201ENST00000333090 CGNL1Q0VF96 1302 aa30.44■■■□□ 2.46
TSKU-201ENST00000333090 COG6Q9Y2V7 657 aa30.42■■■□□ 2.46
TSKU-201ENST00000333090 MYOM1P52179 1685 aa30.42■■■□□ 2.46
TSKU-201ENST00000333090 ABCC1P33527 1531 aa30.42■■■□□ 2.46
TSKU-201ENST00000333090 SCAPERQ9BY12 1400 aa30.42■■■□□ 2.46
TSKU-201ENST00000333090 PANK1Q8TE04 598 aa30.42■■■□□ 2.46
TSKU-201ENST00000333090 SEC24BO95487 1268 aa30.41■■■□□ 2.46
TSKU-201ENST00000333090 CLUAP1Q96AJ1 413 aa30.41■■■□□ 2.46
TSKU-201ENST00000333090 CENPJQ9HC77 1338 aaPredicted RBP30.41■■■□□ 2.46
TSKU-201ENST00000333090 PDE3AQ14432 1141 aa30.4■■■□□ 2.46
TSKU-201ENST00000333090 MAPK8IP3Q9UPT6 1336 aa30.38■■■□□ 2.45
TSKU-201ENST00000333090 KIF3BO15066 747 aa30.38■■■□□ 2.45
TSKU-201ENST00000333090 SPHKAPQ2M3C7 1700 aa30.37■■■□□ 2.45
TSKU-201ENST00000333090 STAC3Q96MF2 364 aa30.37■■■□□ 2.45
TSKU-201ENST00000333090 TRPM2O94759 1503 aa30.36■■■□□ 2.45
TSKU-201ENST00000333090 CARD14Q9BXL6 1004 aa30.35■■■□□ 2.45
TSKU-201ENST00000333090 WWC1Q8IX03 1113 aa30.34■■■□□ 2.45
TSKU-201ENST00000333090 NGEFQ8N5V2 710 aa30.34■■■□□ 2.45
TSKU-201ENST00000333090 SLKQ9H2G2 1235 aaPredicted RBP30.34■■■□□ 2.45
TSKU-201ENST00000333090 KDM5AP29375 1690 aaKnown RBP30.33■■■□□ 2.45
TSKU-201ENST00000333090 BECN1Q14457 450 aa30.33■■■□□ 2.45
TSKU-201ENST00000333090 NEUROD2Q15784 382 aa30.32■■■□□ 2.44
TSKU-201ENST00000333090 VIRMAQ69YN4 1812 aaKnown RBP30.32■■■□□ 2.44
TSKU-201ENST00000333090 CFAP70Q5T0N1 1121 aa30.31■■■□□ 2.44
TSKU-201ENST00000333090 UHRF1BP1LA0JNW5 1464 aa30.31■■■□□ 2.44
TSKU-201ENST00000333090 CLTCL1P53675 1640 aa30.31■■■□□ 2.44
TSKU-201ENST00000333090 NINLQ9Y2I6 1382 aa30.3■■■□□ 2.44
TSKU-201ENST00000333090 POGKQ9P215 609 aa30.3■■■□□ 2.44
TSKU-201ENST00000333090 CEP152O94986 1710 aa30.29■■■□□ 2.44
TSKU-201ENST00000333090 PTPRTO14522 1441 aa30.28■■■□□ 2.44
TSKU-201ENST00000333090 ERVK-7P63135 1459 aa30.27■■■□□ 2.44
TSKU-201ENST00000333090 RRP7AQ9Y3A4 280 aaKnown RBP30.27■■■□□ 2.44
TSKU-201ENST00000333090 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
TSKU-201ENST00000333090 FANCAO15360 1455 aa30.26■■■□□ 2.43
TSKU-201ENST00000333090 TNNT2P45379 298 aaPredicted RBP30.24■■■□□ 2.43
TSKU-201ENST00000333090 SLC24A1O60721 1099 aa30.23■■■□□ 2.43
TSKU-201ENST00000333090 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
TSKU-201ENST00000333090 RARSP54136 660 aaKnown RBP30.22■■■□□ 2.43
TSKU-201ENST00000333090 PMFBP1Q8TBY8 1022 aa30.22■■■□□ 2.43
TSKU-201ENST00000333090 UPF2Q9HAU5 1272 aaKnown RBP30.22■■■□□ 2.43
TSKU-201ENST00000333090 POLR3AO14802 1390 aaPredicted RBP30.22■■■□□ 2.43
TSKU-201ENST00000333090 EIF5BO60841 1220 aaKnown RBP30.22■■■□□ 2.43
TSKU-201ENST00000333090 NLRP1Q9C000 1473 aa30.22■■■□□ 2.43
TSKU-201ENST00000333090 PCDHB15Q9Y5E8 787 aa30.21■■■□□ 2.43
TSKU-201ENST00000333090 BCL2L13Q9BXK5 485 aa30.21■■■□□ 2.43
TSKU-201ENST00000333090 TNNQ9UQP3 1299 aa30.21■■■□□ 2.43
TSKU-201ENST00000333090 ADGRF5Q8IZF2 1346 aa30.2■■■□□ 2.43
TSKU-201ENST00000333090 FAM43AQ8N2R8 423 aa30.2■■■□□ 2.42
TSKU-201ENST00000333090 RLBP1P12271 317 aa30.19■■■□□ 2.42
TSKU-201ENST00000333090 MORC1Q86VD1 984 aa30.17■■■□□ 2.42
TSKU-201ENST00000333090 TCP11L2Q8N4U5 519 aa30.16■■■□□ 2.42
TSKU-201ENST00000333090 ADGRL1O94910 1474 aa30.16■■■□□ 2.42
TSKU-201ENST00000333090 RUNDC1Q96C34 613 aa30.16■■■□□ 2.42
TSKU-201ENST00000333090 PDZRN3Q9UPQ7 1066 aa30.16■■■□□ 2.42
TSKU-201ENST00000333090 ANTXR1Q9H6X2 564 aa30.16■■■□□ 2.42
TSKU-201ENST00000333090 CHGAP10645 457 aaKnown RBP30.15■■■□□ 2.42
TSKU-201ENST00000333090 SENP3Q9H4L4 574 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms