RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 FAM135AQ9P2D6 1515 aa23.35■■□□□ 1.33
SOCS3-201ENST00000330871 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
SOCS3-201ENST00000330871 TBC1D2Q9BYX2 928 aa23.35■■□□□ 1.33
SOCS3-201ENST00000330871 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
SOCS3-201ENST00000330871 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
SOCS3-201ENST00000330871 MYH16Q9H6N6 1097 aa23.34■■□□□ 1.33
SOCS3-201ENST00000330871 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
SOCS3-201ENST00000330871 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
SOCS3-201ENST00000330871 TESK2Q96S53 571 aa23.33■■□□□ 1.33
SOCS3-201ENST00000330871 PANK3Q9H999 370 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 ABCA8O94911 1581 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 FBLN2P98095 1184 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 TRAK2O60296 914 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 MRE11P49959 708 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
SOCS3-201ENST00000330871 DISP3Q9P2K9 1392 aa23.29■■□□□ 1.32
SOCS3-201ENST00000330871 NLRP1Q9C000 1473 aa23.29■■□□□ 1.32
SOCS3-201ENST00000330871 BCAR3O75815 825 aa23.29■■□□□ 1.32
SOCS3-201ENST00000330871 GRPEL1Q9HAV7 217 aa23.29■■□□□ 1.32
SOCS3-201ENST00000330871 CCDC141Q6ZP82 1450 aa23.28■■□□□ 1.32
SOCS3-201ENST00000330871 TMF1P82094 1093 aa23.28■■□□□ 1.32
SOCS3-201ENST00000330871 NUP160Q12769 1436 aa23.28■■□□□ 1.32
SOCS3-201ENST00000330871 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
SOCS3-201ENST00000330871 GOLGA2Q08379 1002 aa23.27■■□□□ 1.32
SOCS3-201ENST00000330871 PDCL3Q9H2J4 239 aa23.27■■□□□ 1.32
SOCS3-201ENST00000330871 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
SOCS3-201ENST00000330871 LAMC1P11047 1609 aa23.27■■□□□ 1.32
SOCS3-201ENST00000330871 PRDM15P57071 1507 aaPredicted RBP23.26■■□□□ 1.31
SOCS3-201ENST00000330871 A2MP01023 1474 aa23.26■■□□□ 1.31
SOCS3-201ENST00000330871 TRIM44Q96DX7 344 aaPredicted RBP23.25■■□□□ 1.31
SOCS3-201ENST00000330871 PLA2R1Q13018 1463 aa23.25■■□□□ 1.31
SOCS3-201ENST00000330871 UPF2Q9HAU5 1272 aaKnown RBP23.24■■□□□ 1.31
SOCS3-201ENST00000330871 A0A0U1RQG5 324 aaPredicted RBP23.23■■□□□ 1.31
SOCS3-201ENST00000330871 TPM2P07951 284 aa23.23■■□□□ 1.31
SOCS3-201ENST00000330871 TBC1D32Q96NH3 1257 aa23.23■■□□□ 1.31
SOCS3-201ENST00000330871 EIF3AQ14152 1382 aaKnown RBP23.22■■□□□ 1.31
SOCS3-201ENST00000330871 KIAA1211Q6ZU35 1233 aa23.21■■□□□ 1.31
SOCS3-201ENST00000330871 SPINK5Q9NQ38 1064 aaPredicted RBP23.21■■□□□ 1.31
SOCS3-201ENST00000330871 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
SOCS3-201ENST00000330871 RBM10P98175 930 aaKnown RBP23.2■■□□□ 1.3
SOCS3-201ENST00000330871 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
SOCS3-201ENST00000330871 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
SOCS3-201ENST00000330871 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
SOCS3-201ENST00000330871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.19■■□□□ 1.3
SOCS3-201ENST00000330871 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
SOCS3-201ENST00000330871 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
SOCS3-201ENST00000330871 PRDM4Q9UKN5 801 aa23.18■■□□□ 1.3
SOCS3-201ENST00000330871 COG6Q9Y2V7 657 aa23.17■■□□□ 1.3
SOCS3-201ENST00000330871 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
SOCS3-201ENST00000330871 UNC13BO14795 1591 aa23.17■■□□□ 1.3
SOCS3-201ENST00000330871 CHMP5Q9NZZ3 219 aa23.16■■□□□ 1.3
SOCS3-201ENST00000330871 CALD1Q05682 793 aaKnown RBP23.16■■□□□ 1.3
SOCS3-201ENST00000330871 GAS2L3Q86XJ1 694 aa23.16■■□□□ 1.3
SOCS3-201ENST00000330871 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
SOCS3-201ENST00000330871 CENPJQ9HC77 1338 aaPredicted RBP23.16■■□□□ 1.3
SOCS3-201ENST00000330871 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
SOCS3-201ENST00000330871 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
SOCS3-201ENST00000330871 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
SOCS3-201ENST00000330871 PREX2Q70Z35 1606 aa23.14■■□□□ 1.29
SOCS3-201ENST00000330871 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
SOCS3-201ENST00000330871 ATP10AO60312 1499 aa23.12■■□□□ 1.29
SOCS3-201ENST00000330871 MAST1Q9Y2H9 1570 aa23.11■■□□□ 1.29
SOCS3-201ENST00000330871 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
SOCS3-201ENST00000330871 MYO5CQ9NQX4 1742 aa23.1■■□□□ 1.29
SOCS3-201ENST00000330871 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
SOCS3-201ENST00000330871 ARID3AQ99856 593 aa23.09■■□□□ 1.29
SOCS3-201ENST00000330871 MAGI2Q86UL8 1455 aa23.09■■□□□ 1.29
SOCS3-201ENST00000330871 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
SOCS3-201ENST00000330871 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
SOCS3-201ENST00000330871 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.29
SOCS3-201ENST00000330871 DDX11L8A8MPP1 907 aa23.07■■□□□ 1.28
SOCS3-201ENST00000330871 RIPK4P57078 832 aa23.07■■□□□ 1.28
SOCS3-201ENST00000330871 AMER1Q5JTC6 1135 aaPredicted RBP23.07■■□□□ 1.28
SOCS3-201ENST00000330871 FAM13BQ9NYF5 915 aa23.07■■□□□ 1.28
SOCS3-201ENST00000330871 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
SOCS3-201ENST00000330871 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
SOCS3-201ENST00000330871 APAF1O14727 1248 aa23.06■■□□□ 1.28
SOCS3-201ENST00000330871 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
SOCS3-201ENST00000330871 NKTRP30414 1462 aaKnown RBP23.06■■□□□ 1.28
SOCS3-201ENST00000330871 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
SOCS3-201ENST00000330871 PDZRN3Q9UPQ7 1066 aa23.06■■□□□ 1.28
SOCS3-201ENST00000330871 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
SOCS3-201ENST00000330871 C22orf23Q9BZE7 217 aa23.03■■□□□ 1.28
SOCS3-201ENST00000330871 ARHGAP5Q13017 1502 aa23.03■■□□□ 1.28
SOCS3-201ENST00000330871 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
SOCS3-201ENST00000330871 ISY1Q9ULR0 285 aaKnown RBP23.02■■□□□ 1.28
SOCS3-201ENST00000330871 PLXNC1O60486 1568 aa23.02■■□□□ 1.28
SOCS3-201ENST00000330871 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
SOCS3-201ENST00000330871 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
SOCS3-201ENST00000330871 ZNF692Q9BU19 519 aaPredicted RBP23.01■■□□□ 1.27
SOCS3-201ENST00000330871 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
SOCS3-201ENST00000330871 DUOX2Q9NRD8 1548 aa23■■□□□ 1.27
SOCS3-201ENST00000330871 AAMPQ13685 434 aa23■■□□□ 1.27
SOCS3-201ENST00000330871 OFD1O75665 1012 aa23■■□□□ 1.27
SOCS3-201ENST00000330871 TNNQ9UQP3 1299 aa22.99■■□□□ 1.27
SOCS3-201ENST00000330871 R3HCC1Q9Y3T6 440 aaKnown RBP22.99■■□□□ 1.27
SOCS3-201ENST00000330871 TNPO1Q92973 898 aaKnown RBP22.98■■□□□ 1.27
SOCS3-201ENST00000330871 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
SOCS3-201ENST00000330871 ZSCAN30Q86W11 494 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms