RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
RARB-201ENST00000330688 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
RARB-201ENST00000330688 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
RARB-201ENST00000330688 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
RARB-201ENST00000330688 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
RARB-201ENST00000330688 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
RARB-201ENST00000330688 ERICH6Q7L0X2 663 aa13.33□□□□□ -0.28
RARB-201ENST00000330688 PLIN1O60240 522 aa13.32□□□□□ -0.28
RARB-201ENST00000330688 SYNMO15061 1565 aa13.32□□□□□ -0.28
RARB-201ENST00000330688 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
RARB-201ENST00000330688 NEURL4Q96JN8 1562 aa13.31□□□□□ -0.28
RARB-201ENST00000330688 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
RARB-201ENST00000330688 WDR43Q15061 677 aaKnown RBP eCLIP13.3□□□□□ -0.28
RARB-201ENST00000330688 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
RARB-201ENST00000330688 MYOM2P54296 1465 aa13.29□□□□□ -0.28
RARB-201ENST00000330688 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
RARB-201ENST00000330688 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
RARB-201ENST00000330688 MAP3K4Q9Y6R4 1608 aa13.29□□□□□ -0.28
RARB-201ENST00000330688 KIAA1210Q9ULL0 1709 aa13.29□□□□□ -0.28
RARB-201ENST00000330688 EFCAB6Q5THR3 1501 aa13.28□□□□□ -0.28
RARB-201ENST00000330688 KIDINS220Q9ULH0 1771 aa13.28□□□□□ -0.28
RARB-201ENST00000330688 MYOM1P52179 1685 aa13.28□□□□□ -0.28
RARB-201ENST00000330688 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
RARB-201ENST00000330688 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
RARB-201ENST00000330688 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
RARB-201ENST00000330688 ABCA6Q8N139 1617 aa13.27□□□□□ -0.29
RARB-201ENST00000330688 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
RARB-201ENST00000330688 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
RARB-201ENST00000330688 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
RARB-201ENST00000330688 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
RARB-201ENST00000330688 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
RARB-201ENST00000330688 LMTK2Q8IWU2 1503 aa13.25□□□□□ -0.29
RARB-201ENST00000330688 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
RARB-201ENST00000330688 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
RARB-201ENST00000330688 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
RARB-201ENST00000330688 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
RARB-201ENST00000330688 NOP58Q9Y2X3 529 aaKnown RBP13.25□□□□□ -0.29
RARB-201ENST00000330688 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
RARB-201ENST00000330688 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
RARB-201ENST00000330688 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
RARB-201ENST00000330688 NOS1P29475 1434 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
RARB-201ENST00000330688 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 GGT6Q6P531 493 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 KIF1BO60333 1816 aa13.24□□□□□ -0.29
RARB-201ENST00000330688 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
RARB-201ENST00000330688 NPATQ14207 1427 aa13.23□□□□□ -0.29
RARB-201ENST00000330688 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
RARB-201ENST00000330688 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
RARB-201ENST00000330688 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
RARB-201ENST00000330688 ADGRB3O60242 1522 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
RARB-201ENST00000330688 APAF1O14727 1248 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
RARB-201ENST00000330688 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.3
RARB-201ENST00000330688 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.3
RARB-201ENST00000330688 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.3
RARB-201ENST00000330688 PDE4AP27815 886 aa13.2□□□□□ -0.3
RARB-201ENST00000330688 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
RARB-201ENST00000330688 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
RARB-201ENST00000330688 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
RARB-201ENST00000330688 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
RARB-201ENST00000330688 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
RARB-201ENST00000330688 TMEM132EQ6IEE7 984 aa13.19□□□□□ -0.3
RARB-201ENST00000330688 MS4A1P11836 297 aa13.19□□□□□ -0.3
RARB-201ENST00000330688 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
RARB-201ENST00000330688 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
RARB-201ENST00000330688 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
RARB-201ENST00000330688 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
RARB-201ENST00000330688 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
RARB-201ENST00000330688 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
RARB-201ENST00000330688 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
RARB-201ENST00000330688 ADGRB1O14514 1584 aa13.16□□□□□ -0.3
RARB-201ENST00000330688 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
RARB-201ENST00000330688 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
RARB-201ENST00000330688 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
RARB-201ENST00000330688 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
RARB-201ENST00000330688 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
RARB-201ENST00000330688 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.3
RARB-201ENST00000330688 ABCC3O15438 1527 aa13.15□□□□□ -0.31
RARB-201ENST00000330688 POLR3AO14802 1390 aaPredicted RBP13.15□□□□□ -0.31
RARB-201ENST00000330688 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
RARB-201ENST00000330688 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
RARB-201ENST00000330688 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
RARB-201ENST00000330688 PPLO60437 1756 aa13.13□□□□□ -0.31
RARB-201ENST00000330688 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
RARB-201ENST00000330688 E9PSI1 815 aa13.13□□□□□ -0.31
RARB-201ENST00000330688 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
RARB-201ENST00000330688 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
RARB-201ENST00000330688 BCAR3O75815 825 aa13.12□□□□□ -0.31
RARB-201ENST00000330688 NBR1Q14596 966 aa13.11□□□□□ -0.31
RARB-201ENST00000330688 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
RARB-201ENST00000330688 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
RARB-201ENST00000330688 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
RARB-201ENST00000330688 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms