RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 EFCAB2Q5VUJ9 269 aa10.19□□□□□ -0.78
SMG1-201ENST00000330588 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
SMG1-201ENST00000330588 KDM5CP41229 1560 aa10.19□□□□□ -0.78
SMG1-201ENST00000330588 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 CDC42BPBQ9Y5S2 1711 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ADAMTSL3P82987 1691 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ZFYVE16Q7Z3T8 1539 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
SMG1-201ENST00000330588 ARHGAP5Q13017 1502 aa10.17□□□□□ -0.78
SMG1-201ENST00000330588 BCORL1Q5H9F3 1711 aa10.17□□□□□ -0.78
SMG1-201ENST00000330588 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
SMG1-201ENST00000330588 ATP1B4Q9UN42 357 aaPredicted RBP10.17□□□□□ -0.78
SMG1-201ENST00000330588 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
SMG1-201ENST00000330588 CDC42BPAQ5VT25 1732 aa10.16□□□□□ -0.78
SMG1-201ENST00000330588 ABCC1P33527 1531 aa10.16□□□□□ -0.78
SMG1-201ENST00000330588 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
SMG1-201ENST00000330588 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 PLEKHH2Q8IVE3 1493 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 MLH3Q9UHC1 1453 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 PPP1R37O75864 691 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 SLC34A2O95436 690 aa10.14□□□□□ -0.79
SMG1-201ENST00000330588 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMG1-201ENST00000330588 MAP3K1Q13233 1512 aa10.13□□□□□ -0.79
SMG1-201ENST00000330588 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
SMG1-201ENST00000330588 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
SMG1-201ENST00000330588 ATP10AO60312 1499 aa10.13□□□□□ -0.79
SMG1-201ENST00000330588 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
SMG1-201ENST00000330588 HS6ST3Q8IZP7 471 aa10.12□□□□□ -0.79
SMG1-201ENST00000330588 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
SMG1-201ENST00000330588 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
SMG1-201ENST00000330588 YEATS2Q9ULM3 1422 aa10.11□□□□□ -0.79
SMG1-201ENST00000330588 MTUS2Q5JR59 1369 aa10.11□□□□□ -0.79
SMG1-201ENST00000330588 AGLP35573 1532 aa10.1□□□□□ -0.79
SMG1-201ENST00000330588 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
SMG1-201ENST00000330588 SAMD9LQ8IVG5 1584 aa10.1□□□□□ -0.79
SMG1-201ENST00000330588 PTPRMP28827 1452 aa10.1□□□□□ -0.79
SMG1-201ENST00000330588 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
SMG1-201ENST00000330588 CCNB3Q8WWL7 1395 aa10.09□□□□□ -0.79
SMG1-201ENST00000330588 MADDQ8WXG6 1647 aa10.09□□□□□ -0.79
SMG1-201ENST00000330588 ARHGEF12Q9NZN5 1544 aa10.08□□□□□ -0.8
SMG1-201ENST00000330588 SUPT6HQ7KZ85 1726 aaKnown RBP10.08□□□□□ -0.8
SMG1-201ENST00000330588 TMC2Q8TDI7 906 aa10.08□□□□□ -0.8
SMG1-201ENST00000330588 SIGLEC1Q9BZZ2 1709 aa10.08□□□□□ -0.8
SMG1-201ENST00000330588 KIDINS220Q9ULH0 1771 aa10.07□□□□□ -0.8
SMG1-201ENST00000330588 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
SMG1-201ENST00000330588 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
SMG1-201ENST00000330588 ABCA6Q8N139 1617 aa10.07□□□□□ -0.8
SMG1-201ENST00000330588 SYCP2Q9BX26 1530 aa10.06□□□□□ -0.8
SMG1-201ENST00000330588 INO80Q9ULG1 1556 aaPredicted RBP10.06□□□□□ -0.8
SMG1-201ENST00000330588 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
SMG1-201ENST00000330588 RIMS1Q86UR5 1692 aaKnown RBP10.05□□□□□ -0.8
SMG1-201ENST00000330588 ARID4BQ4LE39 1312 aaPredicted RBP10.05□□□□□ -0.8
SMG1-201ENST00000330588 NUDT7P0C024 238 aa10.05□□□□□ -0.8
SMG1-201ENST00000330588 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
SMG1-201ENST00000330588 CFDP1Q9UEE9 299 aaPredicted RBP10.05□□□□□ -0.8
SMG1-201ENST00000330588 NCOA2Q15596 1464 aa10.04□□□□□ -0.8
SMG1-201ENST00000330588 LRRC9Q6ZRR7 1453 aa10.04□□□□□ -0.8
SMG1-201ENST00000330588 RTEL1-TNFRSF6BF6WH68 1400 aa10.04□□□□□ -0.8
SMG1-201ENST00000330588 ATP7AQ04656 1500 aa10.04□□□□□ -0.8
SMG1-201ENST00000330588 MBD5Q9P267 1494 aa10.03□□□□□ -0.8
SMG1-201ENST00000330588 PLXNC1O60486 1568 aa10.03□□□□□ -0.8
SMG1-201ENST00000330588 PTGER2P43116 358 aa10.02□□□□□ -0.81
SMG1-201ENST00000330588 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.81
SMG1-201ENST00000330588 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
SMG1-201ENST00000330588 ARHGEF5Q12774 1597 aa10.02□□□□□ -0.81
SMG1-201ENST00000330588 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.81
SMG1-201ENST00000330588 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 CNTLNQ9NXG0 1405 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 FOXK1P85037 733 aa10.01□□□□□ -0.81
SMG1-201ENST00000330588 MIA2Q96PC5 1412 aa10□□□□□ -0.81
SMG1-201ENST00000330588 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
SMG1-201ENST00000330588 MROH2AA6NES4 1674 aa10□□□□□ -0.81
SMG1-201ENST00000330588 PBX2P40425 430 aa10□□□□□ -0.81
SMG1-201ENST00000330588 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
SMG1-201ENST00000330588 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
SMG1-201ENST00000330588 CAMSAP2Q08AD1 1489 aa9.99□□□□□ -0.81
SMG1-201ENST00000330588 CCDC141Q6ZP82 1450 aa9.99□□□□□ -0.81
SMG1-201ENST00000330588 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
SMG1-201ENST00000330588 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
SMG1-201ENST00000330588 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
SMG1-201ENST00000330588 LMTK3Q96Q04 1460 aa9.99□□□□□ -0.81
SMG1-201ENST00000330588 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
SMG1-201ENST00000330588 MAST1Q9Y2H9 1570 aa9.98□□□□□ -0.81
SMG1-201ENST00000330588 A2MP01023 1474 aa9.98□□□□□ -0.81
SMG1-201ENST00000330588 PREX1Q8TCU6 1659 aa9.98□□□□□ -0.81
SMG1-201ENST00000330588 MYOM3Q5VTT5 1437 aa9.97□□□□□ -0.81
SMG1-201ENST00000330588 HNRNPMP52272 730 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMG1-201ENST00000330588 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SMG1-201ENST00000330588 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
SMG1-201ENST00000330588 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
SMG1-201ENST00000330588 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
SMG1-201ENST00000330588 NPATQ14207 1427 aa9.95□□□□□ -0.82
SMG1-201ENST00000330588 C3P01024 1663 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms