RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 ADGRL1O94910 1474 aa22.45■■□□□ 1.18
PRKCD-201ENST00000330452 RAPGEF3O95398 923 aa22.44■■□□□ 1.18
PRKCD-201ENST00000330452 PER1O15534 1290 aaPredicted RBP22.44■■□□□ 1.18
PRKCD-201ENST00000330452 GPRASP1Q5JY77 1395 aa22.43■■□□□ 1.18
PRKCD-201ENST00000330452 TESK2Q96S53 571 aa22.43■■□□□ 1.18
PRKCD-201ENST00000330452 PRDM4Q9UKN5 801 aa22.43■■□□□ 1.18
PRKCD-201ENST00000330452 DISP3Q9P2K9 1392 aa22.43■■□□□ 1.18
PRKCD-201ENST00000330452 NAP1L5Q96NT1 182 aaPredicted RBP22.43■■□□□ 1.18
PRKCD-201ENST00000330452 NFKBIBQ15653 356 aa22.42■■□□□ 1.18
PRKCD-201ENST00000330452 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
PRKCD-201ENST00000330452 PLXNC1O60486 1568 aa22.41■■□□□ 1.18
PRKCD-201ENST00000330452 IQGAP3Q86VI3 1631 aa22.41■■□□□ 1.18
PRKCD-201ENST00000330452 PARD3Q8TEW0 1356 aa22.41■■□□□ 1.18
PRKCD-201ENST00000330452 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
PRKCD-201ENST00000330452 DUOX2Q9NRD8 1548 aa22.4■■□□□ 1.18
PRKCD-201ENST00000330452 GGT6Q6P531 493 aa22.38■■□□□ 1.17
PRKCD-201ENST00000330452 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
PRKCD-201ENST00000330452 PANK3Q9H999 370 aa22.37■■□□□ 1.17
PRKCD-201ENST00000330452 PRDM15P57071 1507 aaPredicted RBP22.37■■□□□ 1.17
PRKCD-201ENST00000330452 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
PRKCD-201ENST00000330452 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
PRKCD-201ENST00000330452 ERBINQ96RT1 1412 aa22.36■■□□□ 1.17
PRKCD-201ENST00000330452 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
PRKCD-201ENST00000330452 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
PRKCD-201ENST00000330452 ATP10AO60312 1499 aa22.33■■□□□ 1.17
PRKCD-201ENST00000330452 TMF1P82094 1093 aa22.33■■□□□ 1.16
PRKCD-201ENST00000330452 ABCA9Q8IUA7 1624 aa22.32■■□□□ 1.16
PRKCD-201ENST00000330452 ATP7AQ04656 1500 aa22.31■■□□□ 1.16
PRKCD-201ENST00000330452 RGS3P49796 1198 aa22.31■■□□□ 1.16
PRKCD-201ENST00000330452 CHGAP10645 457 aaKnown RBP22.3■■□□□ 1.16
PRKCD-201ENST00000330452 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
PRKCD-201ENST00000330452 LAMC1P11047 1609 aa22.3■■□□□ 1.16
PRKCD-201ENST00000330452 TAF7LQ5H9L4 462 aa22.3■■□□□ 1.16
PRKCD-201ENST00000330452 CDCA7LQ96GN5 454 aa22.3■■□□□ 1.16
PRKCD-201ENST00000330452 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
PRKCD-201ENST00000330452 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
PRKCD-201ENST00000330452 CFAP65Q6ZU64 1925 aaKnown RBP22.28■■□□□ 1.16
PRKCD-201ENST00000330452 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
PRKCD-201ENST00000330452 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
PRKCD-201ENST00000330452 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
PRKCD-201ENST00000330452 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
PRKCD-201ENST00000330452 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
PRKCD-201ENST00000330452 PDE3BQ13370 1112 aa22.23■■□□□ 1.15
PRKCD-201ENST00000330452 RTEL1-TNFRSF6BF6WH68 1400 aa22.22■■□□□ 1.15
PRKCD-201ENST00000330452 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
PRKCD-201ENST00000330452 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.14
PRKCD-201ENST00000330452 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
PRKCD-201ENST00000330452 ARAP3Q8WWN8 1544 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 CLCN1P35523 988 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 KIDINS220Q9ULH0 1771 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 KANK1Q14678 1352 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 PDE4AP27815 886 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 MADDQ8WXG6 1647 aa22.18■■□□□ 1.14
PRKCD-201ENST00000330452 BLMP54132 1417 aaPredicted RBP22.17■■□□□ 1.14
PRKCD-201ENST00000330452 PLIN1O60240 522 aa22.17■■□□□ 1.14
PRKCD-201ENST00000330452 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
PRKCD-201ENST00000330452 PDCL3Q9H2J4 239 aa22.16■■□□□ 1.14
PRKCD-201ENST00000330452 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
PRKCD-201ENST00000330452 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
PRKCD-201ENST00000330452 NAP1L2Q9ULW6 460 aaPredicted RBP22.16■■□□□ 1.14
PRKCD-201ENST00000330452 BBXQ8WY36 941 aaPredicted RBP22.15■■□□□ 1.14
PRKCD-201ENST00000330452 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
PRKCD-201ENST00000330452 TRPM2O94759 1503 aa22.15■■□□□ 1.14
PRKCD-201ENST00000330452 DDRGK1Q96HY6 314 aa22.14■■□□□ 1.13
PRKCD-201ENST00000330452 BACH2Q9BYV9 841 aa22.14■■□□□ 1.13
PRKCD-201ENST00000330452 CFAP70Q5T0N1 1121 aa22.14■■□□□ 1.13
PRKCD-201ENST00000330452 PTPRTO14522 1441 aa22.13■■□□□ 1.13
PRKCD-201ENST00000330452 PPP2R1AP30153 589 aa22.13■■□□□ 1.13
PRKCD-201ENST00000330452 POGZQ7Z3K3 1410 aa22.13■■□□□ 1.13
PRKCD-201ENST00000330452 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
PRKCD-201ENST00000330452 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
PRKCD-201ENST00000330452 ADGRF5Q8IZF2 1346 aa22.12■■□□□ 1.13
PRKCD-201ENST00000330452 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
PRKCD-201ENST00000330452 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
PRKCD-201ENST00000330452 SCAF11Q99590 1463 aaKnown RBP22.11■■□□□ 1.13
PRKCD-201ENST00000330452 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
PRKCD-201ENST00000330452 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
PRKCD-201ENST00000330452 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
PRKCD-201ENST00000330452 INSRP06213 1382 aa22.1■■□□□ 1.13
PRKCD-201ENST00000330452 YEATS2Q9ULM3 1422 aa22.1■■□□□ 1.13
PRKCD-201ENST00000330452 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
PRKCD-201ENST00000330452 CEP152O94986 1710 aa22.08■■□□□ 1.12
PRKCD-201ENST00000330452 MLECQ14165 292 aa22.08■■□□□ 1.12
PRKCD-201ENST00000330452 CDCA8Q53HL2 280 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 TSPOAP1O95153 1857 aa22.07■■□□□ 1.12
PRKCD-201ENST00000330452 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
PRKCD-201ENST00000330452 CHMP4BQ9H444 224 aaKnown RBP22.07■■□□□ 1.12
PRKCD-201ENST00000330452 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
PRKCD-201ENST00000330452 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
PRKCD-201ENST00000330452 STAC3Q96MF2 364 aa22.05■■□□□ 1.12
PRKCD-201ENST00000330452 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
PRKCD-201ENST00000330452 TET3O43151 1660 aa22.04■■□□□ 1.12
PRKCD-201ENST00000330452 PLEKHH1Q9ULM0 1364 aa22.04■■□□□ 1.12
PRKCD-201ENST00000330452 SLC4A3P48751 1232 aa22.04■■□□□ 1.12
PRKCD-201ENST00000330452 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
PRKCD-201ENST00000330452 PAXIP1Q6ZW49 1069 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms