RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 ERC2O15083 957 aa16.28■□□□□ 0.2
TRAK1-201ENST00000327628 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
TRAK1-201ENST00000327628 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
TRAK1-201ENST00000327628 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
TRAK1-201ENST00000327628 SETQ01105 290 aaPredicted RBP16.28■□□□□ 0.2
TRAK1-201ENST00000327628 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.2
TRAK1-201ENST00000327628 BECN2A8MW95 431 aa16.27■□□□□ 0.19
TRAK1-201ENST00000327628 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.19
TRAK1-201ENST00000327628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRAK1-201ENST00000327628 TRDNQ13061 729 aa16.27■□□□□ 0.19
TRAK1-201ENST00000327628 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.19
TRAK1-201ENST00000327628 TCEAL9Q9UHQ7 104 aa16.26■□□□□ 0.19
TRAK1-201ENST00000327628 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
TRAK1-201ENST00000327628 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
TRAK1-201ENST00000327628 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
TRAK1-201ENST00000327628 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
TRAK1-201ENST00000327628 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
TRAK1-201ENST00000327628 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
TRAK1-201ENST00000327628 TNNT3P45378 269 aaPredicted RBP16.24■□□□□ 0.19
TRAK1-201ENST00000327628 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
TRAK1-201ENST00000327628 ERICH2A1L162 156 aa16.24■□□□□ 0.19
TRAK1-201ENST00000327628 NUCB2P80303 420 aa16.24■□□□□ 0.19
TRAK1-201ENST00000327628 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
TRAK1-201ENST00000327628 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
TRAK1-201ENST00000327628 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAK1-201ENST00000327628 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
TRAK1-201ENST00000327628 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
TRAK1-201ENST00000327628 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
TRAK1-201ENST00000327628 CDR1P51861 262 aa16.22■□□□□ 0.19
TRAK1-201ENST00000327628 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
TRAK1-201ENST00000327628 RILPL2Q969X0 211 aa16.21■□□□□ 0.19
TRAK1-201ENST00000327628 CLUAP1Q96AJ1 413 aa16.21■□□□□ 0.19
TRAK1-201ENST00000327628 CPLX1O14810 134 aa16.21■□□□□ 0.19
TRAK1-201ENST00000327628 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
TRAK1-201ENST00000327628 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAK1-201ENST00000327628 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
TRAK1-201ENST00000327628 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
TRAK1-201ENST00000327628 KIF21BO75037 1637 aa16.2■□□□□ 0.18
TRAK1-201ENST00000327628 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
TRAK1-201ENST00000327628 HIP1O00291 1037 aa16.19■□□□□ 0.18
TRAK1-201ENST00000327628 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
TRAK1-201ENST00000327628 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
TRAK1-201ENST00000327628 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
TRAK1-201ENST00000327628 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
TRAK1-201ENST00000327628 CHMP5Q9NZZ3 219 aa16.19■□□□□ 0.18
TRAK1-201ENST00000327628 ACBD3Q9H3P7 528 aa16.18■□□□□ 0.18
TRAK1-201ENST00000327628 XBP1P17861 261 aa16.18■□□□□ 0.18
TRAK1-201ENST00000327628 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
TRAK1-201ENST00000327628 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
TRAK1-201ENST00000327628 PRM3Q9NNZ6 103 aa16.18■□□□□ 0.18
TRAK1-201ENST00000327628 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 PSMA5P28066 241 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 PSME1Q06323 249 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 LETM1O95202 739 aaPredicted RBP16.17■□□□□ 0.18
TRAK1-201ENST00000327628 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
TRAK1-201ENST00000327628 PDE4AP27815 886 aa16.16■□□□□ 0.18
TRAK1-201ENST00000327628 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
TRAK1-201ENST00000327628 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
TRAK1-201ENST00000327628 CCDC7Q96M83 1385 aa16.16■□□□□ 0.18
TRAK1-201ENST00000327628 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
TRAK1-201ENST00000327628 MCM2P49736 904 aa16.15■□□□□ 0.18
TRAK1-201ENST00000327628 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
TRAK1-201ENST00000327628 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
TRAK1-201ENST00000327628 CT47B1P0C2W7 299 aaPredicted RBP16.15■□□□□ 0.18
TRAK1-201ENST00000327628 RDXP35241 583 aaKnown RBP16.15■□□□□ 0.18
TRAK1-201ENST00000327628 RIPK4P57078 832 aa16.14■□□□□ 0.17
TRAK1-201ENST00000327628 NAT10Q9H0A0 1025 aaKnown RBP16.14■□□□□ 0.17
TRAK1-201ENST00000327628 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
TRAK1-201ENST00000327628 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
TRAK1-201ENST00000327628 ATF3P18847 181 aa16.14■□□□□ 0.17
TRAK1-201ENST00000327628 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
TRAK1-201ENST00000327628 PES1O00541 588 aaKnown RBP16.13■□□□□ 0.17
TRAK1-201ENST00000327628 GNAI3P08754 354 aa16.13■□□□□ 0.17
TRAK1-201ENST00000327628 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
TRAK1-201ENST00000327628 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
TRAK1-201ENST00000327628 TEX35Q5T0J7 233 aa16.13■□□□□ 0.17
TRAK1-201ENST00000327628 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
TRAK1-201ENST00000327628 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
TRAK1-201ENST00000327628 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
TRAK1-201ENST00000327628 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
TRAK1-201ENST00000327628 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
TRAK1-201ENST00000327628 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
TRAK1-201ENST00000327628 CCDC43Q96MW1 224 aaKnown RBP16.12■□□□□ 0.17
TRAK1-201ENST00000327628 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
TRAK1-201ENST00000327628 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
TRAK1-201ENST00000327628 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
TRAK1-201ENST00000327628 CCP110O43303 1012 aa16.11■□□□□ 0.17
TRAK1-201ENST00000327628 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
TRAK1-201ENST00000327628 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
TRAK1-201ENST00000327628 ARGLU1Q9NWB6 273 aaPredicted RBP16.11■□□□□ 0.17
TRAK1-201ENST00000327628 IGF1RP08069 1367 aa16.11■□□□□ 0.17
TRAK1-201ENST00000327628 CDC45O75419 566 aa16.1■□□□□ 0.17
TRAK1-201ENST00000327628 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
TRAK1-201ENST00000327628 MCTP1Q6DN14 999 aa16.1■□□□□ 0.17
TRAK1-201ENST00000327628 SART3Q15020 963 aaKnown RBP16.1■□□□□ 0.17
TRAK1-201ENST00000327628 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
TRAK1-201ENST00000327628 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms