RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
SF3B2-201ENST00000322535 PDE4AP27815 886 aa13.49□□□□□ -0.25
SF3B2-201ENST00000322535 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
SF3B2-201ENST00000322535 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
SF3B2-201ENST00000322535 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-201ENST00000322535 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
SF3B2-201ENST00000322535 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
SF3B2-201ENST00000322535 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
SF3B2-201ENST00000322535 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
SF3B2-201ENST00000322535 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
SF3B2-201ENST00000322535 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-201ENST00000322535 ARAP3Q8WWN8 1544 aa13.46□□□□□ -0.25
SF3B2-201ENST00000322535 FRAT2O75474 233 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-201ENST00000322535 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-201ENST00000322535 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
SF3B2-201ENST00000322535 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.26
SF3B2-201ENST00000322535 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.26
SF3B2-201ENST00000322535 PLA2R1Q13018 1463 aa13.46□□□□□ -0.26
SF3B2-201ENST00000322535 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
SF3B2-201ENST00000322535 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-201ENST00000322535 ERBINQ96RT1 1412 aa13.45□□□□□ -0.26
SF3B2-201ENST00000322535 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
SF3B2-201ENST00000322535 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
SF3B2-201ENST00000322535 ZNF830Q96NB3 372 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-201ENST00000322535 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
SF3B2-201ENST00000322535 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-201ENST00000322535 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
SF3B2-201ENST00000322535 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
SF3B2-201ENST00000322535 A2MP01023 1474 aa13.43□□□□□ -0.26
SF3B2-201ENST00000322535 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
SF3B2-201ENST00000322535 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
SF3B2-201ENST00000322535 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-201ENST00000322535 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-201ENST00000322535 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.265e-14■□□□□ 8.2
SF3B2-201ENST00000322535 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
SF3B2-201ENST00000322535 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
SF3B2-201ENST00000322535 KANK1Q14678 1352 aa13.41□□□□□ -0.26
SF3B2-201ENST00000322535 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
SF3B2-201ENST00000322535 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
SF3B2-201ENST00000322535 NEO1Q92859 1461 aa13.39□□□□□ -0.27
SF3B2-201ENST00000322535 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
SF3B2-201ENST00000322535 UNC13BO14795 1591 aa13.39□□□□□ -0.27
SF3B2-201ENST00000322535 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-201ENST00000322535 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
SF3B2-201ENST00000322535 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
SF3B2-201ENST00000322535 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
SF3B2-201ENST00000322535 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
SF3B2-201ENST00000322535 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
SF3B2-201ENST00000322535 HECW2Q9P2P5 1572 aa13.37□□□□□ -0.27
SF3B2-201ENST00000322535 TMEM51Q9NW97 253 aa13.37□□□□□ -0.27
SF3B2-201ENST00000322535 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
SF3B2-201ENST00000322535 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
SF3B2-201ENST00000322535 CLCN1P35523 988 aa13.36□□□□□ -0.27
SF3B2-201ENST00000322535 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
SF3B2-201ENST00000322535 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
SF3B2-201ENST00000322535 KDM5CP41229 1560 aa13.36□□□□□ -0.27
SF3B2-201ENST00000322535 E9PCH4 1651 aa13.35□□□□□ -0.27
SF3B2-201ENST00000322535 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
SF3B2-201ENST00000322535 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
SF3B2-201ENST00000322535 POGKQ9P215 609 aa13.35□□□□□ -0.27
SF3B2-201ENST00000322535 ATP10AO60312 1499 aa13.35□□□□□ -0.27
SF3B2-201ENST00000322535 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
SF3B2-201ENST00000322535 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
SF3B2-201ENST00000322535 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.27
SF3B2-201ENST00000322535 RICTORQ6R327 1708 aa13.33□□□□□ -0.28
SF3B2-201ENST00000322535 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
SF3B2-201ENST00000322535 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.28
SF3B2-201ENST00000322535 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
SF3B2-201ENST00000322535 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
SF3B2-201ENST00000322535 GLI2P10070 1586 aa13.32□□□□□ -0.28
SF3B2-201ENST00000322535 CEP152O94986 1710 aa13.32□□□□□ -0.28
SF3B2-201ENST00000322535 USP47Q96K76 1375 aa13.32□□□□□ -0.28
SF3B2-201ENST00000322535 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
SF3B2-201ENST00000322535 NPATQ14207 1427 aa13.31□□□□□ -0.28
SF3B2-201ENST00000322535 TEX2Q8IWB9 1127 aa13.31□□□□□ -0.28
SF3B2-201ENST00000322535 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-201ENST00000322535 ARID3AQ99856 593 aa13.3□□□□□ -0.28
SF3B2-201ENST00000322535 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
SF3B2-201ENST00000322535 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
SF3B2-201ENST00000322535 PRDM10Q9NQV6 1147 aa13.29□□□□□ -0.28
SF3B2-201ENST00000322535 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
SF3B2-201ENST00000322535 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
SF3B2-201ENST00000322535 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-201ENST00000322535 IDI1Q13907 227 aa13.29□□□□□ -0.28
SF3B2-201ENST00000322535 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-201ENST00000322535 KIF7Q2M1P5 1343 aa13.28□□□□□ -0.28
SF3B2-201ENST00000322535 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
SF3B2-201ENST00000322535 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
SF3B2-201ENST00000322535 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.29
SF3B2-201ENST00000322535 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-201ENST00000322535 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-201ENST00000322535 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
SF3B2-201ENST00000322535 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
SF3B2-201ENST00000322535 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
SF3B2-201ENST00000322535 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
SF3B2-201ENST00000322535 SMAP1Q8IYB5 467 aaPredicted RBP13.25□□□□□ -0.29
SF3B2-201ENST00000322535 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
SF3B2-201ENST00000322535 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
SF3B2-201ENST00000322535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
SF3B2-201ENST00000322535 TET3O43151 1660 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms