RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
CRAT-201ENST00000318080 CFAP74Q9C0B2 1584 aa21.18■□□□□ 0.98
CRAT-201ENST00000318080 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
CRAT-201ENST00000318080 RTEL1-TNFRSF6BF6WH68 1400 aa21.18■□□□□ 0.98
CRAT-201ENST00000318080 PARD3Q8TEW0 1356 aa21.17■□□□□ 0.98
CRAT-201ENST00000318080 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
CRAT-201ENST00000318080 KIF3BO15066 747 aa21.16■□□□□ 0.98
CRAT-201ENST00000318080 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
CRAT-201ENST00000318080 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
CRAT-201ENST00000318080 FRAT1Q92837 279 aaPredicted RBP21.15■□□□□ 0.98
CRAT-201ENST00000318080 PKNOX2Q96KN3 472 aa21.15■□□□□ 0.98
CRAT-201ENST00000318080 COL17A1Q9UMD9 1497 aaPredicted RBP21.15■□□□□ 0.98
CRAT-201ENST00000318080 CRBNQ96SW2 442 aa21.14■□□□□ 0.98
CRAT-201ENST00000318080 YEATS2Q9ULM3 1422 aa21.14■□□□□ 0.98
CRAT-201ENST00000318080 C20orf194Q5TEA3 1177 aa21.13■□□□□ 0.97
CRAT-201ENST00000318080 NFKBIBQ15653 356 aa21.13■□□□□ 0.97
CRAT-201ENST00000318080 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 FRMPD1Q5SYB0 1578 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 E9PCH4 1651 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 ERBINQ96RT1 1412 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 GSE1Q14687 1217 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 FAM135AQ9P2D6 1515 aa21.12■□□□□ 0.97
CRAT-201ENST00000318080 ABCA6Q8N139 1617 aa21.1■□□□□ 0.97
CRAT-201ENST00000318080 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
CRAT-201ENST00000318080 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
CRAT-201ENST00000318080 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
CRAT-201ENST00000318080 PANK3Q9H999 370 aa21.1■□□□□ 0.97
CRAT-201ENST00000318080 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
CRAT-201ENST00000318080 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
CRAT-201ENST00000318080 USP35Q9P2H5 1018 aa21.08■□□□□ 0.97
CRAT-201ENST00000318080 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.96
CRAT-201ENST00000318080 TESK2Q96S53 571 aa21.08■□□□□ 0.96
CRAT-201ENST00000318080 UNC13BO14795 1591 aa21.07■□□□□ 0.96
CRAT-201ENST00000318080 MS4A1P11836 297 aa21.07■□□□□ 0.96
CRAT-201ENST00000318080 GGT6Q6P531 493 aa21.07■□□□□ 0.96
CRAT-201ENST00000318080 KDM5DQ9BY66 1539 aa21.07■□□□□ 0.96
CRAT-201ENST00000318080 A2MP01023 1474 aa21.07■□□□□ 0.96
CRAT-201ENST00000318080 DIP2CQ9Y2E4 1556 aa21.03■□□□□ 0.96
CRAT-201ENST00000318080 ADAMTS8Q9UP79 889 aa21.03■□□□□ 0.96
CRAT-201ENST00000318080 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
CRAT-201ENST00000318080 PLA2R1Q13018 1463 aa21.02■□□□□ 0.96
CRAT-201ENST00000318080 FRAT2O75474 233 aaPredicted RBP21.02■□□□□ 0.95
CRAT-201ENST00000318080 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
CRAT-201ENST00000318080 TRPM1Q7Z4N2 1603 aa21■□□□□ 0.95
CRAT-201ENST00000318080 MROH1Q8NDA8 1641 aa21■□□□□ 0.95
CRAT-201ENST00000318080 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
CRAT-201ENST00000318080 BLMP54132 1417 aaPredicted RBP20.99■□□□□ 0.95
CRAT-201ENST00000318080 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
CRAT-201ENST00000318080 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
CRAT-201ENST00000318080 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
CRAT-201ENST00000318080 ARXQ96QS3 562 aa20.94■□□□□ 0.94
CRAT-201ENST00000318080 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
CRAT-201ENST00000318080 KDM2BQ8NHM5 1336 aa20.93■□□□□ 0.94
CRAT-201ENST00000318080 MLECQ14165 292 aa20.93■□□□□ 0.94
CRAT-201ENST00000318080 ZMYM4Q5VZL5 1548 aa20.92■□□□□ 0.94
CRAT-201ENST00000318080 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
CRAT-201ENST00000318080 EIF2AK4Q9P2K8 1649 aaKnown RBP20.92■□□□□ 0.94
CRAT-201ENST00000318080 RGS3P49796 1198 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 TMF1P82094 1093 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 DUSP27Q5VZP5 1158 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 CFAP65Q6ZU64 1925 aaKnown RBP20.91■□□□□ 0.94
CRAT-201ENST00000318080 DDRGK1Q96HY6 314 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 KANK1Q14678 1352 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 CEP152O94986 1710 aa20.91■□□□□ 0.94
CRAT-201ENST00000318080 VWDEQ8N2E2 1590 aa20.9■□□□□ 0.94
CRAT-201ENST00000318080 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
CRAT-201ENST00000318080 ATP10AO60312 1499 aa20.87■□□□□ 0.93
CRAT-201ENST00000318080 RNF17Q9BXT8 1623 aaKnown RBP20.87■□□□□ 0.93
CRAT-201ENST00000318080 C8orf34Q49A92 452 aa20.87■□□□□ 0.93
CRAT-201ENST00000318080 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
CRAT-201ENST00000318080 UGGT1Q9NYU2 1555 aa20.86■□□□□ 0.93
CRAT-201ENST00000318080 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
CRAT-201ENST00000318080 WDR43Q15061 677 aaKnown RBP eCLIP20.84■□□□□ 0.93
CRAT-201ENST00000318080 TET3O43151 1660 aa20.84■□□□□ 0.93
CRAT-201ENST00000318080 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
CRAT-201ENST00000318080 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
CRAT-201ENST00000318080 PODXL2Q9NZ53 605 aa20.83■□□□□ 0.93
CRAT-201ENST00000318080 ZNF521Q96K83 1311 aa20.83■□□□□ 0.92
CRAT-201ENST00000318080 AMER1Q5JTC6 1135 aaPredicted RBP20.83■□□□□ 0.92
CRAT-201ENST00000318080 POGKQ9P215 609 aa20.82■□□□□ 0.92
CRAT-201ENST00000318080 INSRP06213 1382 aa20.82■□□□□ 0.92
CRAT-201ENST00000318080 ABCC3O15438 1527 aa20.82■□□□□ 0.92
CRAT-201ENST00000318080 NPATQ14207 1427 aa20.81■□□□□ 0.92
CRAT-201ENST00000318080 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
CRAT-201ENST00000318080 EFCAB6Q5THR3 1501 aa20.81■□□□□ 0.92
CRAT-201ENST00000318080 FAM161AQ3B820 660 aa20.8■□□□□ 0.92
CRAT-201ENST00000318080 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
CRAT-201ENST00000318080 BCAR3O75815 825 aa20.8■□□□□ 0.92
CRAT-201ENST00000318080 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
CRAT-201ENST00000318080 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
CRAT-201ENST00000318080 CLTCL1P53675 1640 aa20.77■□□□□ 0.92
CRAT-201ENST00000318080 SPHKAPQ2M3C7 1700 aa20.77■□□□□ 0.92
CRAT-201ENST00000318080 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
CRAT-201ENST00000318080 RRAGDQ9NQL2 400 aaPredicted RBP20.77■□□□□ 0.92
CRAT-201ENST00000318080 PTPRTO14522 1441 aa20.76■□□□□ 0.91
CRAT-201ENST00000318080 APAF1O14727 1248 aa20.76■□□□□ 0.91
CRAT-201ENST00000318080 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
CRAT-201ENST00000318080 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
CRAT-201ENST00000318080 LAMC1P11047 1609 aa20.74■□□□□ 0.91
CRAT-201ENST00000318080 TRPM2O94759 1503 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms