RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 MTERF4Q7Z6M4 381 aaKnown RBP23.2■■□□□ 1.31
UBE2N-201ENST00000318066 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
UBE2N-201ENST00000318066 TRIM29Q14134 588 aa23.19■■□□□ 1.3
UBE2N-201ENST00000318066 INTS3Q68E01 1043 aaKnown RBP23.19■■□□□ 1.3
UBE2N-201ENST00000318066 CREBRFQ8IUR6 639 aa23.19■■□□□ 1.3
UBE2N-201ENST00000318066 RRP7AQ9Y3A4 280 aaKnown RBP23.18■■□□□ 1.3
UBE2N-201ENST00000318066 APAF1O14727 1248 aa23.17■■□□□ 1.3
UBE2N-201ENST00000318066 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
UBE2N-201ENST00000318066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
UBE2N-201ENST00000318066 FRAT2O75474 233 aaPredicted RBP23.17■■□□□ 1.3
UBE2N-201ENST00000318066 PKNOX2Q96KN3 472 aa23.17■■□□□ 1.3
UBE2N-201ENST00000318066 MAP7D2Q96T17 732 aa23.17■■□□□ 1.3
UBE2N-201ENST00000318066 TEFQ10587 303 aa23.16■■□□□ 1.3
UBE2N-201ENST00000318066 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
UBE2N-201ENST00000318066 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
UBE2N-201ENST00000318066 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
UBE2N-201ENST00000318066 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
UBE2N-201ENST00000318066 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
UBE2N-201ENST00000318066 PLIN1O60240 522 aa23.14■■□□□ 1.3
UBE2N-201ENST00000318066 PES1O00541 588 aaKnown RBP23.14■■□□□ 1.3
UBE2N-201ENST00000318066 FAM43AQ8N2R8 423 aa23.14■■□□□ 1.3
UBE2N-201ENST00000318066 DDX58O95786 925 aaKnown RBP23.14■■□□□ 1.29
UBE2N-201ENST00000318066 MRE11P49959 708 aa23.13■■□□□ 1.29
UBE2N-201ENST00000318066 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
UBE2N-201ENST00000318066 ARGLU1Q9NWB6 273 aaPredicted RBP23.13■■□□□ 1.29
UBE2N-201ENST00000318066 G3V3G9 751 aa23.13■■□□□ 1.29
UBE2N-201ENST00000318066 GTF2E1P29083 439 aaPredicted RBP23.13■■□□□ 1.29
UBE2N-201ENST00000318066 DCAF8Q5TAQ9 597 aa23.13■■□□□ 1.29
UBE2N-201ENST00000318066 ACBD3Q9H3P7 528 aa23.13■■□□□ 1.29
UBE2N-201ENST00000318066 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
UBE2N-201ENST00000318066 GNAI1P63096 354 aa23.12■■□□□ 1.29
UBE2N-201ENST00000318066 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
UBE2N-201ENST00000318066 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
UBE2N-201ENST00000318066 CPLX1O14810 134 aa23.12■■□□□ 1.29
UBE2N-201ENST00000318066 IFIT2P09913 472 aaKnown RBP23.12■■□□□ 1.29
UBE2N-201ENST00000318066 AMOTL1Q8IY63 956 aa23.11■■□□□ 1.29
UBE2N-201ENST00000318066 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
UBE2N-201ENST00000318066 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
UBE2N-201ENST00000318066 CCAR2Q8N163 923 aaKnown RBP23.11■■□□□ 1.29
UBE2N-201ENST00000318066 MCTP1Q6DN14 999 aa23.11■■□□□ 1.29
UBE2N-201ENST00000318066 C9orf78Q9NZ63 289 aaPredicted RBP23.11■■□□□ 1.29
UBE2N-201ENST00000318066 ERC2O15083 957 aa23.1■■□□□ 1.29
UBE2N-201ENST00000318066 TRHP20396 242 aaPredicted RBP23.1■■□□□ 1.29
UBE2N-201ENST00000318066 ZNF771Q7L3S4 317 aaPredicted RBP23.1■■□□□ 1.29
UBE2N-201ENST00000318066 CDR1P51861 262 aa23.1■■□□□ 1.29
UBE2N-201ENST00000318066 TRDNQ13061 729 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 CCDC7Q96M83 1385 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 SASS6Q6UVJ0 657 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 WWC1Q8IX03 1113 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 BICD2Q8TD16 824 aa23.09■■□□□ 1.29
UBE2N-201ENST00000318066 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
UBE2N-201ENST00000318066 C22orf23Q9BZE7 217 aa23.08■■□□□ 1.29
UBE2N-201ENST00000318066 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.28
UBE2N-201ENST00000318066 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.28
UBE2N-201ENST00000318066 ANO2Q9NQ90 1003 aa23.08■■□□□ 1.28
UBE2N-201ENST00000318066 CCDC73Q6ZRK6 1079 aa23.07■■□□□ 1.28
UBE2N-201ENST00000318066 LETM1O95202 739 aaPredicted RBP23.07■■□□□ 1.28
UBE2N-201ENST00000318066 HOMER1Q86YM7 354 aa23.06■■□□□ 1.28
UBE2N-201ENST00000318066 LTV1Q96GA3 475 aaPredicted RBP23.06■■□□□ 1.28
UBE2N-201ENST00000318066 RIPK4P57078 832 aa23.06■■□□□ 1.28
UBE2N-201ENST00000318066 CCDC39Q9UFE4 941 aa23.06■■□□□ 1.28
UBE2N-201ENST00000318066 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.283e-9■■■□□ 17.9
UBE2N-201ENST00000318066 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
UBE2N-201ENST00000318066 TTC5Q8N0Z6 440 aa23.05■■□□□ 1.28
UBE2N-201ENST00000318066 NOL10Q9BSC4 688 aaKnown RBP23.05■■□□□ 1.28
UBE2N-201ENST00000318066 MBD3O95983 291 aa23.05■■□□□ 1.28
UBE2N-201ENST00000318066 MCM2P49736 904 aa23.04■■□□□ 1.28
UBE2N-201ENST00000318066 CDC45O75419 566 aa23.04■■□□□ 1.28
UBE2N-201ENST00000318066 CUX1P39880 1505 aa23.04■■□□□ 1.28
UBE2N-201ENST00000318066 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
UBE2N-201ENST00000318066 NAT10Q9H0A0 1025 aaKnown RBP23.04■■□□□ 1.28
UBE2N-201ENST00000318066 ZNF592Q92610 1267 aa23.03■■□□□ 1.28
UBE2N-201ENST00000318066 WASHC2AQ641Q2 1341 aa23.03■■□□□ 1.28
UBE2N-201ENST00000318066 DHX8Q14562 1220 aaKnown RBP23.02■■□□□ 1.28
UBE2N-201ENST00000318066 SAFBQ15424 915 aaKnown RBP eCLIP23.02■■□□□ 1.28
UBE2N-201ENST00000318066 VPS53Q5VIR6 699 aa23.01■■□□□ 1.27
UBE2N-201ENST00000318066 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.01■■□□□ 1.27
UBE2N-201ENST00000318066 NOM1Q5C9Z4 860 aaKnown RBP23■■□□□ 1.27
UBE2N-201ENST00000318066 NFKBIBQ15653 356 aa23■■□□□ 1.27
UBE2N-201ENST00000318066 MNS1Q8NEH6 495 aa23■■□□□ 1.27
UBE2N-201ENST00000318066 AK7Q96M32 723 aa22.99■■□□□ 1.27
UBE2N-201ENST00000318066 FAM13BQ9NYF5 915 aa22.99■■□□□ 1.27
UBE2N-201ENST00000318066 PSMA5P28066 241 aa22.98■■□□□ 1.27
UBE2N-201ENST00000318066 KIF7Q2M1P5 1343 aa22.98■■□□□ 1.27
UBE2N-201ENST00000318066 PCMTD1Q96MG8 357 aaPredicted RBP22.98■■□□□ 1.27
UBE2N-201ENST00000318066 VPS37CA5D8V6 355 aaPredicted RBP22.97■■□□□ 1.27
UBE2N-201ENST00000318066 FKBP5Q13451 457 aaPredicted RBP22.97■■□□□ 1.27
UBE2N-201ENST00000318066 ERICH2A1L162 156 aa22.97■■□□□ 1.27
UBE2N-201ENST00000318066 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
UBE2N-201ENST00000318066 HSP90B2PQ58FF3 399 aa22.97■■□□□ 1.27
UBE2N-201ENST00000318066 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
UBE2N-201ENST00000318066 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.97■■□□□ 1.27
UBE2N-201ENST00000318066 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
UBE2N-201ENST00000318066 PTPRGP23470 1445 aa22.96■■□□□ 1.27
UBE2N-201ENST00000318066 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
UBE2N-201ENST00000318066 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
UBE2N-201ENST00000318066 NASPP49321 788 aaPredicted RBP22.96■■□□□ 1.27
UBE2N-201ENST00000318066 HMGN5P82970 282 aaKnown RBP22.96■■□□□ 1.27
UBE2N-201ENST00000318066 FGD6Q6ZV73 1430 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms