RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 NRXN3Q9Y4C0 1643 aa10.14□□□□□ -0.79
NPHP1-201ENST00000316534 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
NPHP1-201ENST00000316534 ASXL1Q8IXJ9 1541 aa10.14□□□□□ -0.79
NPHP1-201ENST00000316534 KIF3BO15066 747 aa10.13□□□□□ -0.79
NPHP1-201ENST00000316534 UBR1Q8IWV7 1749 aa10.13□□□□□ -0.79
NPHP1-201ENST00000316534 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
NPHP1-201ENST00000316534 KTN1Q86UP2 1357 aaKnown RBP10.12□□□□□ -0.79
NPHP1-201ENST00000316534 RAPGEF3O95398 923 aa10.12□□□□□ -0.79
NPHP1-201ENST00000316534 TESK2Q96S53 571 aa10.11□□□□□ -0.79
NPHP1-201ENST00000316534 FAM69CQ0P6D2 419 aa10.11□□□□□ -0.79
NPHP1-201ENST00000316534 C3P01024 1663 aa10.1□□□□□ -0.79
NPHP1-201ENST00000316534 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
NPHP1-201ENST00000316534 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
NPHP1-201ENST00000316534 DDX10Q13206 875 aaKnown RBP10.08□□□□□ -0.8
NPHP1-201ENST00000316534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
NPHP1-201ENST00000316534 INSRP06213 1382 aa10.08□□□□□ -0.8
NPHP1-201ENST00000316534 FER1L4A9Z1Z3 1794 aa10.08□□□□□ -0.8
NPHP1-201ENST00000316534 ZNF142P52746 1687 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-201ENST00000316534 CFAP65Q6ZU64 1925 aaKnown RBP10.06□□□□□ -0.8
NPHP1-201ENST00000316534 A2ML1A8K2U0 1454 aa10.06□□□□□ -0.8
NPHP1-201ENST00000316534 ANKRD26Q9UPS8 1709 aa10.06□□□□□ -0.8
NPHP1-201ENST00000316534 ALKQ9UM73 1620 aa10.05□□□□□ -0.8
NPHP1-201ENST00000316534 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
NPHP1-201ENST00000316534 WASHC2CQ9Y4E1 1318 aa10.05□□□□□ -0.8
NPHP1-201ENST00000316534 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
NPHP1-201ENST00000316534 CARD11Q9BXL7 1154 aa10.05□□□□□ -0.8
NPHP1-201ENST00000316534 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
NPHP1-201ENST00000316534 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
NPHP1-201ENST00000316534 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
NPHP1-201ENST00000316534 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
NPHP1-201ENST00000316534 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
NPHP1-201ENST00000316534 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-201ENST00000316534 PTPRMP28827 1452 aa10.04□□□□□ -0.8
NPHP1-201ENST00000316534 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
NPHP1-201ENST00000316534 C14orf93Q9H972 538 aaKnown RBP10.03□□□□□ -0.8
NPHP1-201ENST00000316534 SLIT1O75093 1534 aa10.03□□□□□ -0.8
NPHP1-201ENST00000316534 CPS1P31327 1500 aa10.03□□□□□ -0.8
NPHP1-201ENST00000316534 TULP4Q9NRJ4 1543 aa10.03□□□□□ -0.8
NPHP1-201ENST00000316534 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.8
NPHP1-201ENST00000316534 ADGRB2O60241 1585 aa10.02□□□□□ -0.8
NPHP1-201ENST00000316534 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.81
NPHP1-201ENST00000316534 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
NPHP1-201ENST00000316534 PUS7Q96PZ0 661 aaKnown RBP10.02□□□□□ -0.81
NPHP1-201ENST00000316534 DNAJC5Q9H3Z4 198 aa10.02□□□□□ -0.81
NPHP1-201ENST00000316534 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
NPHP1-201ENST00000316534 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
NPHP1-201ENST00000316534 PELP1Q8IZL8 1130 aaKnown RBP10.01□□□□□ -0.81
NPHP1-201ENST00000316534 MED14O60244 1454 aa10.01□□□□□ -0.81
NPHP1-201ENST00000316534 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
NPHP1-201ENST00000316534 ANP32CO43423 234 aa10□□□□□ -0.81
NPHP1-201ENST00000316534 LRPPRCP42704 1394 aaKnown RBP10□□□□□ -0.81
NPHP1-201ENST00000316534 DIP2AQ14689 1571 aa10□□□□□ -0.81
NPHP1-201ENST00000316534 TOPAZ1Q8N9V7 1692 aa10□□□□□ -0.81
NPHP1-201ENST00000316534 CENPBP07199 599 aaPredicted RBP10□□□□□ -0.81
NPHP1-201ENST00000316534 TECPR2O15040 1411 aa10□□□□□ -0.81
NPHP1-201ENST00000316534 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
NPHP1-201ENST00000316534 SHPRHQ149N8 1683 aa9.97□□□□□ -0.81
NPHP1-201ENST00000316534 AKAP12Q02952 1782 aa9.97□□□□□ -0.81
NPHP1-201ENST00000316534 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
NPHP1-201ENST00000316534 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.81
NPHP1-201ENST00000316534 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.81
NPHP1-201ENST00000316534 RGL3Q3MIN7 710 aa9.96□□□□□ -0.81
NPHP1-201ENST00000316534 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 IDI1Q13907 227 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 GGT6Q6P531 493 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 ZMYM3Q14202 1370 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 MON2Q7Z3U7 1717 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 KIF20BQ96Q89 1820 aa9.96□□□□□ -0.82
NPHP1-201ENST00000316534 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
NPHP1-201ENST00000316534 BLMP54132 1417 aaPredicted RBP9.94□□□□□ -0.82
NPHP1-201ENST00000316534 RALBP1Q15311 655 aa9.94□□□□□ -0.82
NPHP1-201ENST00000316534 TMF1P82094 1093 aa9.93□□□□□ -0.82
NPHP1-201ENST00000316534 RIMS2Q9UQ26 1411 aa9.93□□□□□ -0.82
NPHP1-201ENST00000316534 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
NPHP1-201ENST00000316534 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
NPHP1-201ENST00000316534 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
NPHP1-201ENST00000316534 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
NPHP1-201ENST00000316534 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
NPHP1-201ENST00000316534 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
NPHP1-201ENST00000316534 SIRT1Q96EB6 747 aa9.91□□□□□ -0.82
NPHP1-201ENST00000316534 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
NPHP1-201ENST00000316534 MYBBP1AQ9BQG0 1328 aaKnown RBP9.91□□□□□ -0.82
NPHP1-201ENST00000316534 CDC42BPGQ6DT37 1551 aa9.91□□□□□ -0.82
NPHP1-201ENST00000316534 TNRQ92752 1358 aa9.9□□□□□ -0.82
NPHP1-201ENST00000316534 ZNF326Q5BKZ1 582 aaKnown RBP9.9□□□□□ -0.82
NPHP1-201ENST00000316534 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-201ENST00000316534 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-201ENST00000316534 ADAMTS13Q76LX8 1427 aa9.9□□□□□ -0.83
NPHP1-201ENST00000316534 ABCC11Q96J66 1382 aa9.9□□□□□ -0.83
NPHP1-201ENST00000316534 CCDC184Q52MB2 194 aa9.9□□□□□ -0.83
NPHP1-201ENST00000316534 NALCNQ8IZF0 1738 aa9.89□□□□□ -0.83
NPHP1-201ENST00000316534 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
NPHP1-201ENST00000316534 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
NPHP1-201ENST00000316534 PLEKHG1Q9ULL1 1385 aa9.89□□□□□ -0.83
NPHP1-201ENST00000316534 CHD2O14647 1828 aaKnown RBP9.88□□□□□ -0.83
NPHP1-201ENST00000316534 TMEM2Q9UHN6 1383 aa9.88□□□□□ -0.83
NPHP1-201ENST00000316534 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
NPHP1-201ENST00000316534 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-201ENST00000316534 CENPJQ9HC77 1338 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-201ENST00000316534 PNISRQ8TF01 805 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms