RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
COL6A2-202ENST00000310645 PTPRGP23470 1445 aa18.81■□□□□ 0.6
COL6A2-202ENST00000310645 E9PSI1 815 aa18.8■□□□□ 0.6
COL6A2-202ENST00000310645 CENPJQ9HC77 1338 aaPredicted RBP18.8■□□□□ 0.6
COL6A2-202ENST00000310645 CGNL1Q0VF96 1302 aa18.8■□□□□ 0.6
COL6A2-202ENST00000310645 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
COL6A2-202ENST00000310645 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
COL6A2-202ENST00000310645 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
COL6A2-202ENST00000310645 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
COL6A2-202ENST00000310645 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
COL6A2-202ENST00000310645 RRP7AQ9Y3A4 280 aaKnown RBP18.78■□□□□ 0.6
COL6A2-202ENST00000310645 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
COL6A2-202ENST00000310645 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
COL6A2-202ENST00000310645 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
COL6A2-202ENST00000310645 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.6
COL6A2-202ENST00000310645 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.6
COL6A2-202ENST00000310645 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
COL6A2-202ENST00000310645 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.59
COL6A2-202ENST00000310645 TNNQ9UQP3 1299 aa18.77■□□□□ 0.59
COL6A2-202ENST00000310645 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
COL6A2-202ENST00000310645 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
COL6A2-202ENST00000310645 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
COL6A2-202ENST00000310645 PRDM15P57071 1507 aaPredicted RBP18.75■□□□□ 0.59
COL6A2-202ENST00000310645 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
COL6A2-202ENST00000310645 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
COL6A2-202ENST00000310645 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
COL6A2-202ENST00000310645 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
COL6A2-202ENST00000310645 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
COL6A2-202ENST00000310645 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
COL6A2-202ENST00000310645 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
COL6A2-202ENST00000310645 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
COL6A2-202ENST00000310645 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
COL6A2-202ENST00000310645 TBC1D32Q96NH3 1257 aa18.71■□□□□ 0.59
COL6A2-202ENST00000310645 ATP10BO94823 1461 aa18.71■□□□□ 0.59
COL6A2-202ENST00000310645 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.58
COL6A2-202ENST00000310645 RLBP1P12271 317 aa18.7■□□□□ 0.58
COL6A2-202ENST00000310645 MCM4P33991 863 aa18.7■□□□□ 0.58
COL6A2-202ENST00000310645 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
COL6A2-202ENST00000310645 WWC1Q8IX03 1113 aa18.7■□□□□ 0.58
COL6A2-202ENST00000310645 PMFBP1Q8TBY8 1022 aa18.69■□□□□ 0.58
COL6A2-202ENST00000310645 CCDC141Q6ZP82 1450 aa18.69■□□□□ 0.58
COL6A2-202ENST00000310645 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
COL6A2-202ENST00000310645 TRAK2O60296 914 aa18.67■□□□□ 0.58
COL6A2-202ENST00000310645 ASXL1Q8IXJ9 1541 aa18.66■□□□□ 0.58
COL6A2-202ENST00000310645 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
COL6A2-202ENST00000310645 RARSP54136 660 aaKnown RBP18.65■□□□□ 0.58
COL6A2-202ENST00000310645 RSPH4AQ5TD94 716 aa18.65■□□□□ 0.58
COL6A2-202ENST00000310645 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
COL6A2-202ENST00000310645 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
COL6A2-202ENST00000310645 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.57
COL6A2-202ENST00000310645 GLIPR1L2Q4G1C9 344 aa18.64■□□□□ 0.57
COL6A2-202ENST00000310645 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
COL6A2-202ENST00000310645 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
COL6A2-202ENST00000310645 HSP90AA1P07900 732 aaKnown RBP18.62■□□□□ 0.57
COL6A2-202ENST00000310645 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
COL6A2-202ENST00000310645 CHMP5Q9NZZ3 219 aa18.62■□□□□ 0.57
COL6A2-202ENST00000310645 HSP90AA2PQ14568 343 aaPredicted RBP18.62■□□□□ 0.57
COL6A2-202ENST00000310645 FSD2A1L4K1 749 aa18.61■□□□□ 0.57
COL6A2-202ENST00000310645 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
COL6A2-202ENST00000310645 EIF2AK4Q9P2K8 1649 aaKnown RBP18.61■□□□□ 0.57
COL6A2-202ENST00000310645 NUP160Q12769 1436 aa18.61■□□□□ 0.57
COL6A2-202ENST00000310645 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
COL6A2-202ENST00000310645 CLCN1P35523 988 aa18.6■□□□□ 0.57
COL6A2-202ENST00000310645 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
COL6A2-202ENST00000310645 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
COL6A2-202ENST00000310645 SYNJ2O15056 1496 aa18.59■□□□□ 0.57
COL6A2-202ENST00000310645 PKNOX2Q96KN3 472 aa18.58■□□□□ 0.57
COL6A2-202ENST00000310645 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.57
COL6A2-202ENST00000310645 SYCP2Q9BX26 1530 aa18.58■□□□□ 0.57
COL6A2-202ENST00000310645 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
COL6A2-202ENST00000310645 LAMC1P11047 1609 aa18.58■□□□□ 0.56
COL6A2-202ENST00000310645 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
COL6A2-202ENST00000310645 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
COL6A2-202ENST00000310645 MRE11P49959 708 aa18.58■□□□□ 0.56
COL6A2-202ENST00000310645 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
COL6A2-202ENST00000310645 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
COL6A2-202ENST00000310645 GRPEL1Q9HAV7 217 aa18.56■□□□□ 0.56
COL6A2-202ENST00000310645 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
COL6A2-202ENST00000310645 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
COL6A2-202ENST00000310645 ABCA8O94911 1581 aa18.56■□□□□ 0.56
COL6A2-202ENST00000310645 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
COL6A2-202ENST00000310645 TRIM44Q96DX7 344 aaPredicted RBP18.55■□□□□ 0.56
COL6A2-202ENST00000310645 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
COL6A2-202ENST00000310645 SCAF11Q99590 1463 aaKnown RBP18.55■□□□□ 0.56
COL6A2-202ENST00000310645 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
COL6A2-202ENST00000310645 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
COL6A2-202ENST00000310645 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
COL6A2-202ENST00000310645 ESPNB1AK53 854 aa18.53■□□□□ 0.56
COL6A2-202ENST00000310645 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.56
COL6A2-202ENST00000310645 ZMYND15Q9H091 742 aa18.52■□□□□ 0.56
COL6A2-202ENST00000310645 SYNMO15061 1565 aa18.52■□□□□ 0.56
COL6A2-202ENST00000310645 ITPRIPQ8IWB1 547 aa18.52■□□□□ 0.55
COL6A2-202ENST00000310645 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
COL6A2-202ENST00000310645 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
COL6A2-202ENST00000310645 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
COL6A2-202ENST00000310645 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
COL6A2-202ENST00000310645 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
COL6A2-202ENST00000310645 DDX11L8A8MPP1 907 aa18.5■□□□□ 0.55
COL6A2-202ENST00000310645 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
COL6A2-202ENST00000310645 MTHFSP49914 203 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms