RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 TPD52L1Q16890 204 aaPredicted RBP10.15□□□□□ -0.79
PPARGC1B-201ENST00000309241 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCDC18Q5T9S5 1454 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CGNQ9P2M7 1197 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 PDCL2Q8N4E4 241 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 E9PSI1 815 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCDC39Q9UFE4 941 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 FOXD1Q16676 465 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 PAF1Q8N7H5 531 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 REC8O95072 547 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 ERICH4A6NGS2 130 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 NUCB2P80303 420 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 H3BQV1 296 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ESPNB1AK53 854 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 BCL11BQ9C0K0 894 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ABCC8Q09428 1581 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 AK7Q96M32 723 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 IPO7O95373 1038 aaKnown RBP10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC173Q0VFZ6 552 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 PLEKHH2Q8IVE3 1493 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 SIN3AQ96ST3 1273 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 MCM2P49736 904 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 RNF20Q5VTR2 975 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 HSP90B2PQ58FF3 399 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 MBD3O95983 291 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 FAM107BQ9H098 131 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 NAT10Q9H0A0 1025 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 DEF6Q9H4E7 631 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 NEXNQ0ZGT2 675 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 KIF2AO00139 706 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 ODF2Q5BJF6 829 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 MCTP1Q6DN14 999 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 FOXD4L4Q8WXT5 416 aaPredicted RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 PKD2Q13563 968 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 TRIM29Q14134 588 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 H0YHG0 523 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 IFT57Q9NWB7 429 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 CUX2O14529 1486 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 MYBBP1AQ9BQG0 1328 aaKnown RBP10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 FAM184AQ8NB25 1140 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms