RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
BRD3-201ENST00000303407 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
BRD3-201ENST00000303407 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
BRD3-201ENST00000303407 TULP1O00294 542 aaPredicted RBP20.34■□□□□ 0.85
BRD3-201ENST00000303407 SYAP1Q96A49 352 aaPredicted RBP20.34■□□□□ 0.85
BRD3-201ENST00000303407 DDX19BQ9UMR2 479 aa20.33■□□□□ 0.85
BRD3-201ENST00000303407 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.85
BRD3-201ENST00000303407 ST18O60284 1047 aa20.33■□□□□ 0.85
BRD3-201ENST00000303407 AFAP1Q8N556 730 aa20.33■□□□□ 0.85
BRD3-201ENST00000303407 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.84
BRD3-201ENST00000303407 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
BRD3-201ENST00000303407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.845e-6■■■■■ 46.2
BRD3-201ENST00000303407 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
BRD3-201ENST00000303407 GORABQ5T7V8 394 aa20.31■□□□□ 0.84
BRD3-201ENST00000303407 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
BRD3-201ENST00000303407 TMEM132EQ6IEE7 984 aa20.31■□□□□ 0.84
BRD3-201ENST00000303407 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
BRD3-201ENST00000303407 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
BRD3-201ENST00000303407 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
BRD3-201ENST00000303407 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
BRD3-201ENST00000303407 CUL7Q14999 1698 aa20.29■□□□□ 0.84
BRD3-201ENST00000303407 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
BRD3-201ENST00000303407 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
BRD3-201ENST00000303407 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
BRD3-201ENST00000303407 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
BRD3-201ENST00000303407 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
BRD3-201ENST00000303407 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
BRD3-201ENST00000303407 PLEKHH2Q8IVE3 1493 aa20.27■□□□□ 0.84
BRD3-201ENST00000303407 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
BRD3-201ENST00000303407 GGNBP2Q9H3C7 697 aa20.27■□□□□ 0.84
BRD3-201ENST00000303407 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
BRD3-201ENST00000303407 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
BRD3-201ENST00000303407 NAIPQ13075 1403 aa20.26■□□□□ 0.83
BRD3-201ENST00000303407 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
BRD3-201ENST00000303407 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
BRD3-201ENST00000303407 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
BRD3-201ENST00000303407 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
BRD3-201ENST00000303407 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
BRD3-201ENST00000303407 PANK1Q8TE04 598 aa20.24■□□□□ 0.83
BRD3-201ENST00000303407 HMOX1P09601 288 aa20.23■□□□□ 0.83
BRD3-201ENST00000303407 API5Q9BZZ5 524 aaKnown RBP20.23■□□□□ 0.83
BRD3-201ENST00000303407 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
BRD3-201ENST00000303407 CSPP1Q1MSJ5 1256 aa20.23■□□□□ 0.83
BRD3-201ENST00000303407 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
BRD3-201ENST00000303407 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
BRD3-201ENST00000303407 MTHFSP49914 203 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 GNAI1P63096 354 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 TEFQ10587 303 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 NECTIN2Q92692 538 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 EIF2S2P20042 333 aaKnown RBP20.2■□□□□ 0.82
BRD3-201ENST00000303407 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
BRD3-201ENST00000303407 GSE1Q14687 1217 aa20.19■□□□□ 0.82
BRD3-201ENST00000303407 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
BRD3-201ENST00000303407 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
BRD3-201ENST00000303407 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
BRD3-201ENST00000303407 AKNAQ7Z591 1439 aa20.18■□□□□ 0.82
BRD3-201ENST00000303407 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
BRD3-201ENST00000303407 SCAPERQ9BY12 1400 aa20.17■□□□□ 0.82
BRD3-201ENST00000303407 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
BRD3-201ENST00000303407 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
BRD3-201ENST00000303407 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
BRD3-201ENST00000303407 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
BRD3-201ENST00000303407 AAMPQ13685 434 aa20.16■□□□□ 0.82
BRD3-201ENST00000303407 PHF14O94880 888 aa20.15■□□□□ 0.82
BRD3-201ENST00000303407 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
BRD3-201ENST00000303407 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
BRD3-201ENST00000303407 TSPYL4Q9UJ04 414 aa20.14■□□□□ 0.81
BRD3-201ENST00000303407 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
BRD3-201ENST00000303407 PSME1Q06323 249 aa20.13■□□□□ 0.81
BRD3-201ENST00000303407 REC8O95072 547 aa20.12■□□□□ 0.81
BRD3-201ENST00000303407 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
BRD3-201ENST00000303407 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
BRD3-201ENST00000303407 LNPKQ9C0E8 428 aa20.12■□□□□ 0.81
BRD3-201ENST00000303407 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
BRD3-201ENST00000303407 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
BRD3-201ENST00000303407 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
BRD3-201ENST00000303407 TPM4P67936 248 aa20.12■□□□□ 0.81
BRD3-201ENST00000303407 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
BRD3-201ENST00000303407 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
BRD3-201ENST00000303407 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
BRD3-201ENST00000303407 ABCC5O15440 1437 aa20.1■□□□□ 0.81
BRD3-201ENST00000303407 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
BRD3-201ENST00000303407 NEXNQ0ZGT2 675 aa20.09■□□□□ 0.81
BRD3-201ENST00000303407 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
BRD3-201ENST00000303407 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.08■□□□□ 0.81
BRD3-201ENST00000303407 FOXD4L6Q3SYB3 417 aaPredicted RBP20.08■□□□□ 0.81
BRD3-201ENST00000303407 FOXD4L3Q6VB84 417 aaPredicted RBP20.08■□□□□ 0.81
BRD3-201ENST00000303407 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.8
BRD3-201ENST00000303407 C22orf23Q9BZE7 217 aa20.08■□□□□ 0.8
BRD3-201ENST00000303407 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.8
BRD3-201ENST00000303407 KIF14Q15058 1648 aa20.08■□□□□ 0.8
BRD3-201ENST00000303407 INTS3Q68E01 1043 aaKnown RBP20.07■□□□□ 0.8
BRD3-201ENST00000303407 CHMP5Q9NZZ3 219 aa20.07■□□□□ 0.8
BRD3-201ENST00000303407 H3BQV1 296 aa20.07■□□□□ 0.8
BRD3-201ENST00000303407 IFFO2Q5TF58 517 aa20.07■□□□□ 0.8
BRD3-201ENST00000303407 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
BRD3-201ENST00000303407 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
BRD3-201ENST00000303407 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
BRD3-201ENST00000303407 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms