RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
MECP2-201ENST00000303391 TSPY26PQ9H489 355 aa13.18□□□□□ -0.3
MECP2-201ENST00000303391 C22orf23Q9BZE7 217 aa13.18□□□□□ -0.3
MECP2-201ENST00000303391 GOLGA6L10A6NI86 522 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 TRAK2O60296 914 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 CALCOCO1Q9P1Z2 691 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
MECP2-201ENST00000303391 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
MECP2-201ENST00000303391 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
MECP2-201ENST00000303391 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
MECP2-201ENST00000303391 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
MECP2-201ENST00000303391 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
MECP2-201ENST00000303391 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
MECP2-201ENST00000303391 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
MECP2-201ENST00000303391 RABEP1Q15276 862 aa13.16□□□□□ -0.3
MECP2-201ENST00000303391 SMARCE1Q969G3 411 aa13.15□□□□□ -0.3
MECP2-201ENST00000303391 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
MECP2-201ENST00000303391 ERLIN2O94905 339 aa13.15□□□□□ -0.3
MECP2-201ENST00000303391 CREBRFQ8IUR6 639 aa13.15□□□□□ -0.3
MECP2-201ENST00000303391 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
MECP2-201ENST00000303391 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
MECP2-201ENST00000303391 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 PKD2Q13563 968 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 PDCL3Q9H2J4 239 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
MECP2-201ENST00000303391 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
MECP2-201ENST00000303391 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
MECP2-201ENST00000303391 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
MECP2-201ENST00000303391 CCDC112Q8NEF3 446 aa13.13□□□□□ -0.31
MECP2-201ENST00000303391 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
MECP2-201ENST00000303391 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 USP47Q96K76 1375 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 UQCRHP07919 91 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 NUP155O75694 1391 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 ESPNB1AK53 854 aa13.12□□□□□ -0.31
MECP2-201ENST00000303391 CUX2O14529 1486 aa13.11□□□□□ -0.31
MECP2-201ENST00000303391 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
MECP2-201ENST00000303391 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
MECP2-201ENST00000303391 MCM5P33992 734 aa13.11□□□□□ -0.31
MECP2-201ENST00000303391 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
MECP2-201ENST00000303391 MCM3P25205 808 aa13.11□□□□□ -0.31
MECP2-201ENST00000303391 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
MECP2-201ENST00000303391 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 KINO60870 393 aaKnown RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 CDC45O75419 566 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 PSMA5P28066 241 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 CPLX1O14810 134 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 FOXD4L4Q8WXT5 416 aaPredicted RBP13.1□□□□□ -0.31
MECP2-201ENST00000303391 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
MECP2-201ENST00000303391 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 ERC2O15083 957 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 MARCH6O60337 910 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 ZSCAN30Q86W11 494 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
MECP2-201ENST00000303391 PRM3Q9NNZ6 103 aa13.09□□□□□ -0.31
MECP2-201ENST00000303391 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
MECP2-201ENST00000303391 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.31
MECP2-201ENST00000303391 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
MECP2-201ENST00000303391 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
MECP2-201ENST00000303391 GIMAP7Q8NHV1 300 aa13.08□□□□□ -0.32
MECP2-201ENST00000303391 ANKRD18AQ8IVF6 992 aa13.08□□□□□ -0.32
MECP2-201ENST00000303391 RILPL2Q969X0 211 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 SOGA1O94964 1423 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
MECP2-201ENST00000303391 CBFA2T2O43439 604 aa13.06□□□□□ -0.32
MECP2-201ENST00000303391 MAP9Q49MG5 647 aa13.06□□□□□ -0.32
MECP2-201ENST00000303391 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
MECP2-201ENST00000303391 NEFHP12036 1026 aa13.06□□□□□ -0.32
MECP2-201ENST00000303391 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
MECP2-201ENST00000303391 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
MECP2-201ENST00000303391 POLR3GO15318 223 aaPredicted RBP13.06□□□□□ -0.32
MECP2-201ENST00000303391 TRDNQ13061 729 aa13.06□□□□□ -0.32
MECP2-201ENST00000303391 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
MECP2-201ENST00000303391 HIP1O00291 1037 aa13.05□□□□□ -0.32
MECP2-201ENST00000303391 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
MECP2-201ENST00000303391 BRMS1Q9HCU9 246 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms