RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 IFT140Q96RY7 1462 aa17.9■□□□□ 0.46
KARS-201ENST00000302445 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.46
KARS-201ENST00000302445 GOLGA2Q08379 1002 aa17.89■□□□□ 0.46
KARS-201ENST00000302445 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.46
KARS-201ENST00000302445 ATP10AO60312 1499 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 PLEKHH1Q9ULM0 1364 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 IQGAP3Q86VI3 1631 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
KARS-201ENST00000302445 TMF1P82094 1093 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 SKAP1Q86WV1 359 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
KARS-201ENST00000302445 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
KARS-201ENST00000302445 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
KARS-201ENST00000302445 ABCA8O94911 1581 aa17.88■□□□□ 0.45
KARS-201ENST00000302445 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
KARS-201ENST00000302445 IQGAP1P46940 1657 aa17.88■□□□□ 0.45
KARS-201ENST00000302445 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
KARS-201ENST00000302445 PANK3Q9H999 370 aa17.87■□□□□ 0.45
KARS-201ENST00000302445 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
KARS-201ENST00000302445 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
KARS-201ENST00000302445 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
KARS-201ENST00000302445 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
KARS-201ENST00000302445 WDR7Q9Y4E6 1490 aa17.86■□□□□ 0.45
KARS-201ENST00000302445 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
KARS-201ENST00000302445 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
KARS-201ENST00000302445 NLRP1Q9C000 1473 aa17.85■□□□□ 0.45
KARS-201ENST00000302445 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
KARS-201ENST00000302445 AAMPQ13685 434 aa17.85■□□□□ 0.45
KARS-201ENST00000302445 USP19O94966 1318 aa17.85■□□□□ 0.45
KARS-201ENST00000302445 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
KARS-201ENST00000302445 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
KARS-201ENST00000302445 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
KARS-201ENST00000302445 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
KARS-201ENST00000302445 ASXL1Q8IXJ9 1541 aa17.83■□□□□ 0.45
KARS-201ENST00000302445 PREX2Q70Z35 1606 aa17.83■□□□□ 0.44
KARS-201ENST00000302445 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
KARS-201ENST00000302445 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
KARS-201ENST00000302445 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
KARS-201ENST00000302445 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
KARS-201ENST00000302445 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
KARS-201ENST00000302445 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
KARS-201ENST00000302445 MAGI2Q86UL8 1455 aa17.8■□□□□ 0.44
KARS-201ENST00000302445 RGS3P49796 1198 aa17.79■□□□□ 0.44
KARS-201ENST00000302445 MYOM1P52179 1685 aa17.79■□□□□ 0.44
KARS-201ENST00000302445 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
KARS-201ENST00000302445 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
KARS-201ENST00000302445 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
KARS-201ENST00000302445 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
KARS-201ENST00000302445 MADDQ8WXG6 1647 aa17.77■□□□□ 0.44
KARS-201ENST00000302445 E9PSI1 815 aa17.77■□□□□ 0.44
KARS-201ENST00000302445 POGKQ9P215 609 aa17.77■□□□□ 0.44
KARS-201ENST00000302445 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.44
KARS-201ENST00000302445 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
KARS-201ENST00000302445 PLEKHD1A6NEE1 506 aa17.76■□□□□ 0.43
KARS-201ENST00000302445 AMER1Q5JTC6 1135 aaPredicted RBP17.76■□□□□ 0.43
KARS-201ENST00000302445 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
KARS-201ENST00000302445 DUOX2Q9NRD8 1548 aa17.75■□□□□ 0.43
KARS-201ENST00000302445 SPHKAPQ2M3C7 1700 aa17.74■□□□□ 0.43
KARS-201ENST00000302445 FSD2A1L4K1 749 aa17.74■□□□□ 0.43
KARS-201ENST00000302445 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
KARS-201ENST00000302445 RRAGDQ9NQL2 400 aaPredicted RBP17.74■□□□□ 0.43
KARS-201ENST00000302445 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
KARS-201ENST00000302445 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
KARS-201ENST00000302445 CLCN1P35523 988 aa17.74■□□□□ 0.43
KARS-201ENST00000302445 KDM5AP29375 1690 aaKnown RBP17.73■□□□□ 0.43
KARS-201ENST00000302445 ATP10BO94823 1461 aa17.73■□□□□ 0.43
KARS-201ENST00000302445 STAC3Q96MF2 364 aa17.73■□□□□ 0.43
KARS-201ENST00000302445 CLUAP1Q96AJ1 413 aa17.72■□□□□ 0.43
KARS-201ENST00000302445 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
KARS-201ENST00000302445 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
KARS-201ENST00000302445 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.42
KARS-201ENST00000302445 TTC37Q6PGP7 1564 aa17.7■□□□□ 0.42
KARS-201ENST00000302445 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
KARS-201ENST00000302445 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
KARS-201ENST00000302445 CEP152O94986 1710 aa17.69■□□□□ 0.42
KARS-201ENST00000302445 IGHDP01880 384 aa17.69■□□□□ 0.42
KARS-201ENST00000302445 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
KARS-201ENST00000302445 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
KARS-201ENST00000302445 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
KARS-201ENST00000302445 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
KARS-201ENST00000302445 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
KARS-201ENST00000302445 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
KARS-201ENST00000302445 MRE11P49959 708 aa17.65■□□□□ 0.42
KARS-201ENST00000302445 RGL3Q3MIN7 710 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
KARS-201ENST00000302445 SHROOM2Q13796 1616 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 BCAR3O75815 825 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 SEC24BO95487 1268 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 MCM4P33991 863 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
KARS-201ENST00000302445 SYCP2Q9BX26 1530 aa17.63■□□□□ 0.41
KARS-201ENST00000302445 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
KARS-201ENST00000302445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.417e-7■■□□□ 12.3
KARS-201ENST00000302445 TRPM2O94759 1503 aa17.63■□□□□ 0.41
KARS-201ENST00000302445 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
KARS-201ENST00000302445 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
KARS-201ENST00000302445 APAF1O14727 1248 aa17.61■□□□□ 0.41
KARS-201ENST00000302445 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
KARS-201ENST00000302445 DDX11L8A8MPP1 907 aa17.6■□□□□ 0.41
KARS-201ENST00000302445 PKNOX2Q96KN3 472 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms