RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
SDC2-201ENST00000302190 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
SDC2-201ENST00000302190 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
SDC2-201ENST00000302190 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
SDC2-201ENST00000302190 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
SDC2-201ENST00000302190 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
SDC2-201ENST00000302190 ATP7AQ04656 1500 aa18.2■□□□□ 0.5
SDC2-201ENST00000302190 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
SDC2-201ENST00000302190 APAF1O14727 1248 aa18.18■□□□□ 0.5
SDC2-201ENST00000302190 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
SDC2-201ENST00000302190 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
SDC2-201ENST00000302190 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
SDC2-201ENST00000302190 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
SDC2-201ENST00000302190 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
SDC2-201ENST00000302190 STK26Q9P289 416 aa18.17■□□□□ 0.5
SDC2-201ENST00000302190 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
SDC2-201ENST00000302190 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
SDC2-201ENST00000302190 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
SDC2-201ENST00000302190 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
SDC2-201ENST00000302190 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
SDC2-201ENST00000302190 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
SDC2-201ENST00000302190 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
SDC2-201ENST00000302190 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.5
SDC2-201ENST00000302190 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
SDC2-201ENST00000302190 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
SDC2-201ENST00000302190 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
SDC2-201ENST00000302190 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
SDC2-201ENST00000302190 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
SDC2-201ENST00000302190 A2MP01023 1474 aa18.11■□□□□ 0.49
SDC2-201ENST00000302190 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
SDC2-201ENST00000302190 PDE3BQ13370 1112 aa18.11■□□□□ 0.49
SDC2-201ENST00000302190 COG6Q9Y2V7 657 aa18.1■□□□□ 0.49
SDC2-201ENST00000302190 U2AF1L5P0DN76 240 aaPredicted RBP18.1■□□□□ 0.49
SDC2-201ENST00000302190 U2AF1Q01081 240 aaKnown RBP eCLIP18.1■□□□□ 0.49
SDC2-201ENST00000302190 KANK1Q14678 1352 aa18.09■□□□□ 0.49
SDC2-201ENST00000302190 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
SDC2-201ENST00000302190 CFAP53Q96M91 514 aa18.08■□□□□ 0.49
SDC2-201ENST00000302190 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.48
SDC2-201ENST00000302190 PKNOX2Q96KN3 472 aa18.08■□□□□ 0.48
SDC2-201ENST00000302190 CEBPAP49715 358 aaPredicted RBP18.07■□□□□ 0.48
SDC2-201ENST00000302190 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
SDC2-201ENST00000302190 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
SDC2-201ENST00000302190 BECN1Q14457 450 aa18.07■□□□□ 0.48
SDC2-201ENST00000302190 PLA2R1Q13018 1463 aa18.06■□□□□ 0.48
SDC2-201ENST00000302190 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
SDC2-201ENST00000302190 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
SDC2-201ENST00000302190 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
SDC2-201ENST00000302190 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
SDC2-201ENST00000302190 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
SDC2-201ENST00000302190 NEO1Q92859 1461 aa18.04■□□□□ 0.48
SDC2-201ENST00000302190 ABCA6Q8N139 1617 aa18.04■□□□□ 0.48
SDC2-201ENST00000302190 PLXNC1O60486 1568 aa18.03■□□□□ 0.48
SDC2-201ENST00000302190 INO80Q9ULG1 1556 aaPredicted RBP18.03■□□□□ 0.48
SDC2-201ENST00000302190 MAST1Q9Y2H9 1570 aa18.03■□□□□ 0.48
SDC2-201ENST00000302190 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
SDC2-201ENST00000302190 SOX12O15370 315 aa18.03■□□□□ 0.48
SDC2-201ENST00000302190 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
SDC2-201ENST00000302190 POGKQ9P215 609 aa18.02■□□□□ 0.47
SDC2-201ENST00000302190 BCAR3O75815 825 aa18.01■□□□□ 0.47
SDC2-201ENST00000302190 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
SDC2-201ENST00000302190 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
SDC2-201ENST00000302190 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
SDC2-201ENST00000302190 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
SDC2-201ENST00000302190 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
SDC2-201ENST00000302190 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
SDC2-201ENST00000302190 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
SDC2-201ENST00000302190 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
SDC2-201ENST00000302190 FRMPD1Q5SYB0 1578 aa17.99■□□□□ 0.47
SDC2-201ENST00000302190 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
SDC2-201ENST00000302190 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
SDC2-201ENST00000302190 PPP2R1AP30153 589 aa17.97■□□□□ 0.47
SDC2-201ENST00000302190 GLIPR1L2Q4G1C9 344 aa17.97■□□□□ 0.47
SDC2-201ENST00000302190 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
SDC2-201ENST00000302190 APBB1O00213 710 aa17.96■□□□□ 0.47
SDC2-201ENST00000302190 RICTORQ6R327 1708 aa17.96■□□□□ 0.47
SDC2-201ENST00000302190 FAM161AQ3B820 660 aa17.96■□□□□ 0.47
SDC2-201ENST00000302190 CENPQQ7L2Z9 268 aaPredicted RBP17.96■□□□□ 0.47
SDC2-201ENST00000302190 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
SDC2-201ENST00000302190 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
SDC2-201ENST00000302190 IDI1Q13907 227 aa17.95■□□□□ 0.46
SDC2-201ENST00000302190 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
SDC2-201ENST00000302190 CEP152O94986 1710 aa17.95■□□□□ 0.46
SDC2-201ENST00000302190 KDM5CP41229 1560 aa17.95■□□□□ 0.46
SDC2-201ENST00000302190 DIP2CQ9Y2E4 1556 aa17.95■□□□□ 0.46
SDC2-201ENST00000302190 GLI2P10070 1586 aa17.94■□□□□ 0.46
SDC2-201ENST00000302190 E9PCH4 1651 aa17.94■□□□□ 0.46
SDC2-201ENST00000302190 CFAP74Q9C0B2 1584 aa17.94■□□□□ 0.46
SDC2-201ENST00000302190 ATP10AO60312 1499 aa17.93■□□□□ 0.46
SDC2-201ENST00000302190 UNC13BO14795 1591 aa17.93■□□□□ 0.46
SDC2-201ENST00000302190 ADGRF5Q8IZF2 1346 aa17.93■□□□□ 0.46
SDC2-201ENST00000302190 NPATQ14207 1427 aa17.93■□□□□ 0.46
SDC2-201ENST00000302190 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
SDC2-201ENST00000302190 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
SDC2-201ENST00000302190 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
SDC2-201ENST00000302190 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
SDC2-201ENST00000302190 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
SDC2-201ENST00000302190 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
SDC2-201ENST00000302190 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
SDC2-201ENST00000302190 MS4A1P11836 297 aa17.9■□□□□ 0.46
SDC2-201ENST00000302190 MROH1Q8NDA8 1641 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms