RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 IDI1Q13907 227 aa30.83■■■□□ 2.53
SMAD1-201ENST00000302085 CFAP70Q5T0N1 1121 aa30.83■■■□□ 2.53
SMAD1-201ENST00000302085 RPGRIP1LQ68CZ1 1315 aa30.83■■■□□ 2.53
SMAD1-201ENST00000302085 IQGAP1P46940 1657 aa30.82■■■□□ 2.52
SMAD1-201ENST00000302085 PREX1Q8TCU6 1659 aa30.82■■■□□ 2.52
SMAD1-201ENST00000302085 SLC52A1Q9NWF4 448 aa30.81■■■□□ 2.52
SMAD1-201ENST00000302085 FBXO31Q5XUX0 539 aaPredicted RBP30.81■■■□□ 2.52
SMAD1-201ENST00000302085 PPLO60437 1756 aa30.8■■■□□ 2.52
SMAD1-201ENST00000302085 PRKRIP1Q9H875 184 aaPredicted RBP30.8■■■□□ 2.52
SMAD1-201ENST00000302085 MLECQ14165 292 aa30.79■■■□□ 2.52
SMAD1-201ENST00000302085 SCAF11Q99590 1463 aaKnown RBP30.79■■■□□ 2.52
SMAD1-201ENST00000302085 DISP3Q9P2K9 1392 aa30.76■■■□□ 2.51
SMAD1-201ENST00000302085 CLTCQ00610 1675 aaKnown RBP30.76■■■□□ 2.51
SMAD1-201ENST00000302085 ERVK-7P63135 1459 aa30.74■■■□□ 2.51
SMAD1-201ENST00000302085 TMF1P82094 1093 aa30.72■■■□□ 2.51
SMAD1-201ENST00000302085 PIK3C2GO75747 1445 aa30.71■■■□□ 2.51
SMAD1-201ENST00000302085 C14orf93Q9H972 538 aaKnown RBP30.7■■■□□ 2.51
SMAD1-201ENST00000302085 NEXMIFQ5QGS0 1516 aa30.69■■■□□ 2.5
SMAD1-201ENST00000302085 TRHP20396 242 aaPredicted RBP30.68■■■□□ 2.5
SMAD1-201ENST00000302085 SCAF1Q9H7N4 1312 aaKnown RBP30.68■■■□□ 2.5
SMAD1-201ENST00000302085 VGFO15240 615 aaPredicted RBP30.67■■■□□ 2.5
SMAD1-201ENST00000302085 TMEM131LA2VDJ0 1609 aa30.67■■■□□ 2.5
SMAD1-201ENST00000302085 NUTM2DQ5VT03 806 aaPredicted RBP30.66■■■□□ 2.5
SMAD1-201ENST00000302085 EIF3AQ14152 1382 aaKnown RBP30.66■■■□□ 2.5
SMAD1-201ENST00000302085 CCDC184Q52MB2 194 aa30.65■■■□□ 2.5
SMAD1-201ENST00000302085 SETBP1Q9Y6X0 1596 aa30.65■■■□□ 2.5
SMAD1-201ENST00000302085 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
SMAD1-201ENST00000302085 SPATA31D1Q6ZQQ2 1576 aa30.62■■■□□ 2.49
SMAD1-201ENST00000302085 ZFYVE9O95405 1425 aa30.61■■■□□ 2.49
SMAD1-201ENST00000302085 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
SMAD1-201ENST00000302085 ESF1Q9H501 851 aaKnown RBP30.6■■■□□ 2.49
SMAD1-201ENST00000302085 ADGRB1O14514 1584 aa30.59■■■□□ 2.49
SMAD1-201ENST00000302085 CNGB1Q14028 1251 aaPredicted RBP30.56■■■□□ 2.48
SMAD1-201ENST00000302085 TMEM132EQ6IEE7 984 aa30.56■■■□□ 2.48
SMAD1-201ENST00000302085 PER1O15534 1290 aaPredicted RBP30.55■■■□□ 2.48
SMAD1-201ENST00000302085 CDCA8Q53HL2 280 aa30.53■■■□□ 2.48
SMAD1-201ENST00000302085 DNAJC5Q9H3Z4 198 aa30.53■■■□□ 2.48
SMAD1-201ENST00000302085 PANK3Q9H999 370 aa30.52■■■□□ 2.48
SMAD1-201ENST00000302085 MRS2Q9HD23 443 aa30.52■■■□□ 2.48
SMAD1-201ENST00000302085 STAG3Q9UJ98 1225 aa30.52■■■□□ 2.48
SMAD1-201ENST00000302085 TRAK1Q9UPV9 953 aa30.52■■■□□ 2.48
SMAD1-201ENST00000302085 GTF3C3Q9Y5Q9 886 aa30.51■■■□□ 2.47
SMAD1-201ENST00000302085 MYO3AQ8NEV4 1616 aa30.51■■■□□ 2.47
SMAD1-201ENST00000302085 SLC24A1O60721 1099 aa30.5■■■□□ 2.47
SMAD1-201ENST00000302085 A2ML1A8K2U0 1454 aa30.49■■■□□ 2.47
SMAD1-201ENST00000302085 CENPJQ9HC77 1338 aaPredicted RBP30.48■■■□□ 2.47
SMAD1-201ENST00000302085 SBNO2Q9Y2G9 1366 aa30.46■■■□□ 2.47
SMAD1-201ENST00000302085 RALBP1Q15311 655 aa30.45■■■□□ 2.47
SMAD1-201ENST00000302085 KTN1Q86UP2 1357 aaKnown RBP30.45■■■□□ 2.46
SMAD1-201ENST00000302085 SENP3Q9H4L4 574 aaPredicted RBP30.43■■■□□ 2.46
SMAD1-201ENST00000302085 TNRQ92752 1358 aa30.4■■■□□ 2.46
SMAD1-201ENST00000302085 FAM9BQ8IZU0 186 aa30.39■■■□□ 2.46
SMAD1-201ENST00000302085 KDM5AP29375 1690 aaKnown RBP30.39■■■□□ 2.46
SMAD1-201ENST00000302085 RIMS2Q9UQ26 1411 aa30.39■■■□□ 2.46
SMAD1-201ENST00000302085 ASXL1Q8IXJ9 1541 aa30.39■■■□□ 2.46
SMAD1-201ENST00000302085 PARD3Q8TEW0 1356 aa30.39■■■□□ 2.45
SMAD1-201ENST00000302085 MYBBP1AQ9BQG0 1328 aaKnown RBP30.38■■■□□ 2.45
SMAD1-201ENST00000302085 MYOM1P52179 1685 aa30.36■■■□□ 2.45
SMAD1-201ENST00000302085 QRICH2Q9H0J4 1663 aa30.36■■■□□ 2.45
SMAD1-201ENST00000302085 HNRNPUQ00839 825 aaKnown RBP eCLIP30.35■■■□□ 2.45
SMAD1-201ENST00000302085 ALKQ9UM73 1620 aa30.34■■■□□ 2.45
SMAD1-201ENST00000302085 ARHGEF28Q8N1W1 1705 aaKnown RBP30.34■■■□□ 2.45
SMAD1-201ENST00000302085 CC2D1BQ5T0F9 858 aaKnown RBP30.32■■■□□ 2.44
SMAD1-201ENST00000302085 STK26Q9P289 416 aa30.32■■■□□ 2.44
SMAD1-201ENST00000302085 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
SMAD1-201ENST00000302085 TMC1Q8TDI8 760 aa30.3■■■□□ 2.44
SMAD1-201ENST00000302085 KNSTRNQ9Y448 316 aa30.3■■■□□ 2.44
SMAD1-201ENST00000302085 BRD4O60885 1362 aaPredicted RBP30.3■■■□□ 2.44
SMAD1-201ENST00000302085 YTHDC2Q9H6S0 1430 aaKnown RBP30.28■■■□□ 2.44
SMAD1-201ENST00000302085 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.28■■■□□ 2.44
SMAD1-201ENST00000302085 PNISRQ8TF01 805 aaKnown RBP30.28■■■□□ 2.44
SMAD1-201ENST00000302085 AMER1Q5JTC6 1135 aaPredicted RBP30.26■■■□□ 2.44
SMAD1-201ENST00000302085 NLRP13Q86W25 1043 aa30.24■■■□□ 2.43
SMAD1-201ENST00000302085 PTPRMP28827 1452 aa30.24■■■□□ 2.43
SMAD1-201ENST00000302085 UBR1Q8IWV7 1749 aa30.23■■■□□ 2.43
SMAD1-201ENST00000302085 C3P01024 1663 aa30.23■■■□□ 2.43
SMAD1-201ENST00000302085 FER1L4A9Z1Z3 1794 aa30.22■■■□□ 2.43
SMAD1-201ENST00000302085 HDGFP51858 240 aaKnown RBP30.22■■■□□ 2.43
SMAD1-201ENST00000302085 EVC2Q86UK5 1308 aa30.22■■■□□ 2.43
SMAD1-201ENST00000302085 SAFB2Q14151 953 aaKnown RBP eCLIP30.21■■■□□ 2.43
SMAD1-201ENST00000302085 PUS7Q96PZ0 661 aaKnown RBP30.21■■■□□ 2.43
SMAD1-201ENST00000302085 CARD14Q9BXL6 1004 aa30.21■■■□□ 2.43
SMAD1-201ENST00000302085 TMEM2Q9UHN6 1383 aa30.21■■■□□ 2.43
SMAD1-201ENST00000302085 NLRP1Q9C000 1473 aa30.2■■■□□ 2.43
SMAD1-201ENST00000302085 TULP4Q9NRJ4 1543 aa30.2■■■□□ 2.42
SMAD1-201ENST00000302085 PRAM1Q96QH2 718 aa30.19■■■□□ 2.42
SMAD1-201ENST00000302085 SETD1AO15047 1707 aaKnown RBP30.19■■■□□ 2.42
SMAD1-201ENST00000302085 NRXN3Q9Y4C0 1643 aa30.18■■■□□ 2.42
SMAD1-201ENST00000302085 NPC1L1Q9UHC9 1359 aa30.18■■■□□ 2.42
SMAD1-201ENST00000302085 SLC12A5Q9H2X9 1139 aa30.17■■■□□ 2.42
SMAD1-201ENST00000302085 POGKQ9P215 609 aa30.16■■■□□ 2.42
SMAD1-201ENST00000302085 PLPPR3Q6T4P5 718 aa30.15■■■□□ 2.42
SMAD1-201ENST00000302085 LRPPRCP42704 1394 aaKnown RBP30.15■■■□□ 2.42
SMAD1-201ENST00000302085 CABP2Q9NPB3 220 aa30.12■■■□□ 2.41
SMAD1-201ENST00000302085 MINK1Q8N4C8 1332 aaPredicted RBP30.12■■■□□ 2.41
SMAD1-201ENST00000302085 METP08581 1390 aa30.11■■■□□ 2.41
SMAD1-201ENST00000302085 ABCC11Q96J66 1382 aa30.11■■■□□ 2.41
SMAD1-201ENST00000302085 ZBED9Q6R2W3 1325 aa30.11■■■□□ 2.41
SMAD1-201ENST00000302085 DLC1Q96QB1 1528 aa30.11■■■□□ 2.41
SMAD1-201ENST00000302085 LTKP29376 864 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms