RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
TRIM9-201ENST00000298355 CIZ1Q9ULV3 898 aaPredicted RBP20.92■□□□□ 0.94
TRIM9-201ENST00000298355 GNL2Q13823 731 aaKnown RBP20.91■□□□□ 0.94
TRIM9-201ENST00000298355 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
TRIM9-201ENST00000298355 ARGLU1Q9NWB6 273 aaPredicted RBP20.91■□□□□ 0.94
TRIM9-201ENST00000298355 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 SKAP1Q86WV1 359 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 APPP05067 770 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.94
TRIM9-201ENST00000298355 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.93
TRIM9-201ENST00000298355 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
TRIM9-201ENST00000298355 SASS6Q6UVJ0 657 aa20.88■□□□□ 0.93
TRIM9-201ENST00000298355 CWC15Q9P013 229 aaKnown RBP20.87■□□□□ 0.93
TRIM9-201ENST00000298355 KIF3AQ9Y496 699 aa20.87■□□□□ 0.93
TRIM9-201ENST00000298355 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
TRIM9-201ENST00000298355 IGF1RP08069 1367 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 CBX1P83916 185 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 PDCL2Q8N4E4 241 aa20.85■□□□□ 0.93
TRIM9-201ENST00000298355 CDC45O75419 566 aa20.85■□□□□ 0.93
TRIM9-201ENST00000298355 XRCC6P12956 609 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
TRIM9-201ENST00000298355 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 BCL11BQ9C0K0 894 aaPredicted RBP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 LETM1O95202 739 aaPredicted RBP20.83■□□□□ 0.93
TRIM9-201ENST00000298355 PDE4CQ08493 712 aa20.83■□□□□ 0.93
TRIM9-201ENST00000298355 TPD52L1Q16890 204 aaPredicted RBP20.83■□□□□ 0.93
TRIM9-201ENST00000298355 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
TRIM9-201ENST00000298355 K7ELQ4 463 aaPredicted RBP20.82■□□□□ 0.92
TRIM9-201ENST00000298355 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
TRIM9-201ENST00000298355 BCAR3O75815 825 aa20.82■□□□□ 0.92
TRIM9-201ENST00000298355 XPCQ01831 940 aaPredicted RBP20.82■□□□□ 0.92
TRIM9-201ENST00000298355 NOC3LQ8WTT2 800 aaKnown RBP20.81■□□□□ 0.92
TRIM9-201ENST00000298355 CHMP3Q9Y3E7 222 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 RABEP1Q15276 862 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 DYNC1I1O14576 645 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 MPNDQ8N594 471 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 RUNDC1Q96C34 613 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
TRIM9-201ENST00000298355 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
TRIM9-201ENST00000298355 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 CCDC144AA2RUR9 1427 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 KANK1Q14678 1352 aa20.77■□□□□ 0.92
TRIM9-201ENST00000298355 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
TRIM9-201ENST00000298355 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
TRIM9-201ENST00000298355 CCDC112Q8NEF3 446 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 H3BQV1 296 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 PANK2Q9BZ23 570 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 MYOM3Q5VTT5 1437 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
TRIM9-201ENST00000298355 GPATCH3Q96I76 525 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 CGNQ9P2M7 1197 aaKnown RBP20.75■□□□□ 0.91
TRIM9-201ENST00000298355 SMC3Q9UQE7 1217 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
TRIM9-201ENST00000298355 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 BICD2Q8TD16 824 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 BBXQ8WY36 941 aaPredicted RBP20.74■□□□□ 0.91
TRIM9-201ENST00000298355 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 TRIM5Q9C035 493 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 LMOD3Q0VAK6 560 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 SPC24Q8NBT2 197 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 MCM5P33992 734 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 VPS37CA5D8V6 355 aaPredicted RBP20.71■□□□□ 0.91
TRIM9-201ENST00000298355 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
TRIM9-201ENST00000298355 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
TRIM9-201ENST00000298355 ERICH4A6NGS2 130 aa20.7■□□□□ 0.91
TRIM9-201ENST00000298355 CCDC34Q96HJ3 373 aa20.7■□□□□ 0.9
TRIM9-201ENST00000298355 HSP90B2PQ58FF3 399 aa20.7■□□□□ 0.9
TRIM9-201ENST00000298355 TNPO1Q92973 898 aaKnown RBP20.69■□□□□ 0.9
TRIM9-201ENST00000298355 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 MCM2P49736 904 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 API5Q9BZZ5 524 aaKnown RBP20.69■□□□□ 0.9
TRIM9-201ENST00000298355 CFTRP13569 1480 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 ACBD3Q9H3P7 528 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 CUX1P39880 1505 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 EFCAB2Q5VUJ9 269 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 TSPYL1Q9H0U9 437 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 NPHP1O15259 732 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 SYCE3A1L190 88 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 NEK4P51957 841 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 LEKR1Q6ZMV7 388 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 HFM1A2PYH4 1435 aa20.66■□□□□ 0.9
TRIM9-201ENST00000298355 AK7Q96M32 723 aa20.65■□□□□ 0.9
TRIM9-201ENST00000298355 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
TRIM9-201ENST00000298355 CALCOCO1Q9P1Z2 691 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms