RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 CERKQ8TCT0 537 aa34.72■■■■□ 3.15
GBX1-201ENST00000297537 HDGFP51858 240 aaKnown RBP34.71■■■■□ 3.15
GBX1-201ENST00000297537 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.67■■■■□ 3.14
GBX1-201ENST00000297537 PLEKHG1Q9ULL1 1385 aa34.62■■■■□ 3.13
GBX1-201ENST00000297537 PPP1R15AO75807 674 aaPredicted RBP34.59■■■■□ 3.13
GBX1-201ENST00000297537 KIF1BO60333 1816 aa34.59■■■■□ 3.13
GBX1-201ENST00000297537 CCDC144AA2RUR9 1427 aa34.58■■■■□ 3.13
GBX1-201ENST00000297537 ZNF326Q5BKZ1 582 aaKnown RBP34.58■■■■□ 3.13
GBX1-201ENST00000297537 NUTM2DQ5VT03 806 aaPredicted RBP34.58■■■■□ 3.13
GBX1-201ENST00000297537 TRIM26Q12899 539 aaPredicted RBP34.57■■■■□ 3.12
GBX1-201ENST00000297537 SLC26A8Q96RN1 970 aa34.56■■■■□ 3.12
GBX1-201ENST00000297537 CPS1P31327 1500 aa34.53■■■■□ 3.12
GBX1-201ENST00000297537 NEXMIFQ5QGS0 1516 aa34.52■■■■□ 3.12
GBX1-201ENST00000297537 IQSEC2Q5JU85 1478 aa34.52■■■■□ 3.12
GBX1-201ENST00000297537 ANKRD30BQ9BXX2 1392 aa34.51■■■■□ 3.12
GBX1-201ENST00000297537 RPGRIP1LQ68CZ1 1315 aa34.51■■■■□ 3.11
GBX1-201ENST00000297537 SPATA31E1Q6ZUB1 1445 aa34.5■■■■□ 3.11
GBX1-201ENST00000297537 FBXO41Q8TF61 875 aa34.5■■■■□ 3.11
GBX1-201ENST00000297537 BCANQ96GW7 911 aa34.5■■■■□ 3.11
GBX1-201ENST00000297537 TBX22Q9Y458 520 aa34.5■■■■□ 3.11
GBX1-201ENST00000297537 STRCP1A6NGW2 1772 aa34.49■■■■□ 3.11
GBX1-201ENST00000297537 ADAMTS13Q76LX8 1427 aa34.49■■■■□ 3.11
GBX1-201ENST00000297537 SENP3Q9H4L4 574 aaPredicted RBP34.47■■■■□ 3.11
GBX1-201ENST00000297537 ILDR1Q86SU0 546 aaPredicted RBP34.46■■■■□ 3.11
GBX1-201ENST00000297537 KCNA6P17658 529 aa34.45■■■■□ 3.11
GBX1-201ENST00000297537 VGFO15240 615 aaPredicted RBP34.42■■■■□ 3.1
GBX1-201ENST00000297537 SETBP1Q9Y6X0 1596 aa34.4■■■■□ 3.1
GBX1-201ENST00000297537 RGL3Q3MIN7 710 aa34.4■■■■□ 3.1
GBX1-201ENST00000297537 LRRC7Q96NW7 1537 aa34.4■■■■□ 3.1
GBX1-201ENST00000297537 NRXN3Q9Y4C0 1643 aa34.39■■■■□ 3.1
GBX1-201ENST00000297537 DIP2AQ14689 1571 aa34.39■■■■□ 3.1
GBX1-201ENST00000297537 PIK3R4Q99570 1358 aa34.36■■■■□ 3.09
GBX1-201ENST00000297537 PPLO60437 1756 aa34.36■■■■□ 3.09
GBX1-201ENST00000297537 NWD1Q149M9 1564 aa34.35■■■■□ 3.09
GBX1-201ENST00000297537 CHD2O14647 1828 aaKnown RBP34.32■■■■□ 3.09
GBX1-201ENST00000297537 NKTRP30414 1462 aaKnown RBP34.28■■■■□ 3.08
GBX1-201ENST00000297537 ADGRF5Q8IZF2 1346 aa34.28■■■■□ 3.08
GBX1-201ENST00000297537 IFT172Q9UG01 1749 aa34.27■■■■□ 3.08
GBX1-201ENST00000297537 METP08581 1390 aa34.27■■■■□ 3.08
GBX1-201ENST00000297537 PTPRUQ92729 1446 aa34.27■■■■□ 3.08
GBX1-201ENST00000297537 PROSER2Q86WR7 435 aaPredicted RBP34.24■■■■□ 3.07
GBX1-201ENST00000297537 TMEM94Q12767 1356 aa34.23■■■■□ 3.07
GBX1-201ENST00000297537 AMOTL2Q9Y2J4 779 aa34.23■■■■□ 3.07
GBX1-201ENST00000297537 UBAP1LF5GYI3 381 aa34.22■■■■□ 3.07
GBX1-201ENST00000297537 XIRP1Q702N8 1843 aaKnown RBP34.22■■■■□ 3.07
GBX1-201ENST00000297537 ALKQ9UM73 1620 aa34.21■■■■□ 3.07
GBX1-201ENST00000297537 SETD1AO15047 1707 aaKnown RBP34.18■■■■□ 3.06
GBX1-201ENST00000297537 RBM33Q96EV2 1170 aaKnown RBP34.18■■■■□ 3.06
GBX1-201ENST00000297537 DHX57Q6P158 1386 aaKnown RBP34.18■■■■□ 3.06
GBX1-201ENST00000297537 PIK3C2GO75747 1445 aa34.17■■■■□ 3.06
GBX1-201ENST00000297537 NRXN1Q9ULB1 1477 aa34.17■■■■□ 3.06
GBX1-201ENST00000297537 MYOM2P54296 1465 aa34.16■■■■□ 3.06
GBX1-201ENST00000297537 TOM1O60784 492 aa34.16■■■■□ 3.06
GBX1-201ENST00000297537 NCOA3Q9Y6Q9 1424 aa34.14■■■■□ 3.06
GBX1-201ENST00000297537 XRN1Q8IZH2 1706 aaKnown RBP34.14■■■■□ 3.06
GBX1-201ENST00000297537 STAC3Q96MF2 364 aa34.11■■■■□ 3.05
GBX1-201ENST00000297537 C14orf93Q9H972 538 aaKnown RBP34.09■■■■□ 3.05
GBX1-201ENST00000297537 DCAF11Q8TEB1 546 aa34.08■■■■□ 3.05
GBX1-201ENST00000297537 PRAG1Q86YV5 1406 aa34.06■■■■□ 3.04
GBX1-201ENST00000297537 SIN3AQ96ST3 1273 aa34.03■■■■□ 3.04
GBX1-201ENST00000297537 KDM2AQ9Y2K7 1162 aa34.03■■■■□ 3.04
GBX1-201ENST00000297537 MSH6P52701 1360 aa34.02■■■■□ 3.04
GBX1-201ENST00000297537 CFAP70Q5T0N1 1121 aa34.01■■■■□ 3.03
GBX1-201ENST00000297537 PCGF6Q9BYE7 350 aa34.01■■■■□ 3.03
GBX1-201ENST00000297537 ASXL1Q8IXJ9 1541 aa34■■■■□ 3.03
GBX1-201ENST00000297537 PIP4K2BP78356 416 aa34■■■■□ 3.03
GBX1-201ENST00000297537 PTCH1Q13635 1447 aa34■■■■□ 3.03
GBX1-201ENST00000297537 TMEM132EQ6IEE7 984 aa34■■■■□ 3.03
GBX1-201ENST00000297537 C19orf44Q9H6X5 657 aa33.99■■■■□ 3.03
GBX1-201ENST00000297537 ROBO2Q9HCK4 1378 aa33.98■■■■□ 3.03
GBX1-201ENST00000297537 LRPPRCP42704 1394 aaKnown RBP33.97■■■■□ 3.03
GBX1-201ENST00000297537 ABCC11Q96J66 1382 aa33.96■■■■□ 3.03
GBX1-201ENST00000297537 TECPR2O15040 1411 aa33.95■■■■□ 3.02
GBX1-201ENST00000297537 C14orf37Q86TY3 774 aa33.94■■■■□ 3.02
GBX1-201ENST00000297537 LAMC1P11047 1609 aa33.93■■■■□ 3.02
GBX1-201ENST00000297537 SCAF1Q9H7N4 1312 aaKnown RBP33.93■■■■□ 3.02
GBX1-201ENST00000297537 YTHDC2Q9H6S0 1430 aaKnown RBP33.92■■■■□ 3.02
GBX1-201ENST00000297537 NEUROD1Q13562 356 aa33.91■■■■□ 3.02
GBX1-201ENST00000297537 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.9■■■■□ 3.02
GBX1-201ENST00000297537 L3MBTL2Q969R5 705 aa33.9■■■■□ 3.02
GBX1-201ENST00000297537 STK26Q9P289 416 aa33.9■■■■□ 3.02
GBX1-201ENST00000297537 FAM135BQ49AJ0 1406 aa33.89■■■■□ 3.02
GBX1-201ENST00000297537 CADPS2Q86UW7 1296 aa33.89■■■■□ 3.02
GBX1-201ENST00000297537 SLAIN2Q9P270 581 aa33.89■■■■□ 3.02
GBX1-201ENST00000297537 DCCP43146 1447 aa33.87■■■■□ 3.01
GBX1-201ENST00000297537 ADGRL3Q9HAR2 1447 aa33.87■■■■□ 3.01
GBX1-201ENST00000297537 ADGRB1O14514 1584 aa33.87■■■■□ 3.01
GBX1-201ENST00000297537 SIRT1Q96EB6 747 aa33.87■■■■□ 3.01
GBX1-201ENST00000297537 ATF3P18847 181 aa33.86■■■■□ 3.01
GBX1-201ENST00000297537 KNDC1Q76NI1 1749 aa33.84■■■■□ 3.01
GBX1-201ENST00000297537 HSPA1LP34931 641 aa33.83■■■■□ 3.01
GBX1-201ENST00000297537 WAPLQ7Z5K2 1190 aa33.82■■■■□ 3
GBX1-201ENST00000297537 NALCNQ8IZF0 1738 aa33.81■■■■□ 3
GBX1-201ENST00000297537 PLEKHH1Q9ULM0 1364 aa33.78■■■■□ 3
GBX1-201ENST00000297537 DLC1Q96QB1 1528 aa33.75■■■□□ 2.99
GBX1-201ENST00000297537 ROBO1Q9Y6N7 1651 aa33.75■■■□□ 2.99
GBX1-201ENST00000297537 MST1RQ04912 1400 aa33.75■■■□□ 2.99
GBX1-201ENST00000297537 KIAA1210Q9ULL0 1709 aa33.73■■■□□ 2.99
GBX1-201ENST00000297537 NBPF1Q3BBV0 1214 aa33.71■■■□□ 2.99
GBX1-201ENST00000297537 TRAK1Q9UPV9 953 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms