RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FBXO31Q5XUX0 539 aaPredicted RBP29.65■■■□□ 2.34
SOX17-201ENST00000297316 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
SOX17-201ENST00000297316 MYOM2P54296 1465 aa29.61■■■□□ 2.33
SOX17-201ENST00000297316 IDI1Q13907 227 aa29.61■■■□□ 2.33
SOX17-201ENST00000297316 PPLO60437 1756 aa29.6■■■□□ 2.33
SOX17-201ENST00000297316 CFAP70Q5T0N1 1121 aa29.58■■■□□ 2.33
SOX17-201ENST00000297316 MYO5BQ9ULV0 1848 aa29.57■■■□□ 2.32
SOX17-201ENST00000297316 IQGAP1P46940 1657 aa29.55■■■□□ 2.32
SOX17-201ENST00000297316 NUTM2DQ5VT03 806 aaPredicted RBP29.55■■■□□ 2.32
SOX17-201ENST00000297316 KIAA1210Q9ULL0 1709 aa29.54■■■□□ 2.32
SOX17-201ENST00000297316 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
SOX17-201ENST00000297316 ARID4BQ4LE39 1312 aaPredicted RBP29.54■■■□□ 2.32
SOX17-201ENST00000297316 ERVK-7P63135 1459 aa29.53■■■□□ 2.32
SOX17-201ENST00000297316 TESK2Q96S53 571 aa29.53■■■□□ 2.32
SOX17-201ENST00000297316 PPP6R1Q9UPN7 881 aa29.53■■■□□ 2.32
SOX17-201ENST00000297316 NRXN1Q9ULB1 1477 aa29.53■■■□□ 2.32
SOX17-201ENST00000297316 SLC52A1Q9NWF4 448 aa29.5■■■□□ 2.31
SOX17-201ENST00000297316 DISP3Q9P2K9 1392 aa29.48■■■□□ 2.31
SOX17-201ENST00000297316 NEXMIFQ5QGS0 1516 aa29.48■■■□□ 2.31
SOX17-201ENST00000297316 PRKRIP1Q9H875 184 aaPredicted RBP29.48■■■□□ 2.31
SOX17-201ENST00000297316 TMEM131LA2VDJ0 1609 aa29.47■■■□□ 2.31
SOX17-201ENST00000297316 SCAF11Q99590 1463 aaKnown RBP29.47■■■□□ 2.31
SOX17-201ENST00000297316 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
SOX17-201ENST00000297316 PIK3C2GO75747 1445 aa29.45■■■□□ 2.3
SOX17-201ENST00000297316 CCDC184Q52MB2 194 aa29.44■■■□□ 2.3
SOX17-201ENST00000297316 SENP3Q9H4L4 574 aaPredicted RBP29.44■■■□□ 2.3
SOX17-201ENST00000297316 CNGB1Q14028 1251 aaPredicted RBP29.42■■■□□ 2.3
SOX17-201ENST00000297316 ESF1Q9H501 851 aaKnown RBP29.42■■■□□ 2.3
SOX17-201ENST00000297316 SPATA31D1Q6ZQQ2 1576 aa29.42■■■□□ 2.3
SOX17-201ENST00000297316 ZMYM3Q14202 1370 aa29.41■■■□□ 2.3
SOX17-201ENST00000297316 C14orf93Q9H972 538 aaKnown RBP29.38■■■□□ 2.29
SOX17-201ENST00000297316 TMEM132EQ6IEE7 984 aa29.38■■■□□ 2.29
SOX17-201ENST00000297316 TMF1P82094 1093 aa29.36■■■□□ 2.29
SOX17-201ENST00000297316 VGFO15240 615 aaPredicted RBP29.36■■■□□ 2.29
SOX17-201ENST00000297316 STAG3Q9UJ98 1225 aa29.34■■■□□ 2.29
SOX17-201ENST00000297316 SETBP1Q9Y6X0 1596 aa29.34■■■□□ 2.29
SOX17-201ENST00000297316 ADGRB1O14514 1584 aa29.33■■■□□ 2.29
SOX17-201ENST00000297316 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
SOX17-201ENST00000297316 TRAK1Q9UPV9 953 aa29.3■■■□□ 2.28
SOX17-201ENST00000297316 A2ML1A8K2U0 1454 aa29.28■■■□□ 2.28
SOX17-201ENST00000297316 ZFYVE9O95405 1425 aa29.27■■■□□ 2.28
SOX17-201ENST00000297316 CEBPAP49715 358 aaPredicted RBP29.25■■■□□ 2.27
SOX17-201ENST00000297316 MRS2Q9HD23 443 aa29.25■■■□□ 2.27
SOX17-201ENST00000297316 MYO3AQ8NEV4 1616 aa29.23■■■□□ 2.27
SOX17-201ENST00000297316 TNRQ92752 1358 aa29.21■■■□□ 2.27
SOX17-201ENST00000297316 PLPPR3Q6T4P5 718 aa29.21■■■□□ 2.27
SOX17-201ENST00000297316 ASXL1Q8IXJ9 1541 aa29.21■■■□□ 2.27
SOX17-201ENST00000297316 PANK3Q9H999 370 aa29.2■■■□□ 2.27
SOX17-201ENST00000297316 HNRNPUQ00839 825 aaKnown RBP eCLIP29.19■■■□□ 2.26
SOX17-201ENST00000297316 FER1L4A9Z1Z3 1794 aa29.19■■■□□ 2.26
SOX17-201ENST00000297316 CENPJQ9HC77 1338 aaPredicted RBP29.19■■■□□ 2.26
SOX17-201ENST00000297316 PER1O15534 1290 aaPredicted RBP29.19■■■□□ 2.26
SOX17-201ENST00000297316 RIMS2Q9UQ26 1411 aa29.18■■■□□ 2.26
SOX17-201ENST00000297316 QRICH2Q9H0J4 1663 aa29.18■■■□□ 2.26
SOX17-201ENST00000297316 ARHGEF28Q8N1W1 1705 aaKnown RBP29.16■■■□□ 2.26
SOX17-201ENST00000297316 FAM9BQ8IZU0 186 aa29.16■■■□□ 2.26
SOX17-201ENST00000297316 C3P01024 1663 aa29.16■■■□□ 2.26
SOX17-201ENST00000297316 MYOM1P52179 1685 aa29.16■■■□□ 2.26
SOX17-201ENST00000297316 KDM5AP29375 1690 aaKnown RBP29.15■■■□□ 2.26
SOX17-201ENST00000297316 STK26Q9P289 416 aa29.15■■■□□ 2.26
SOX17-201ENST00000297316 ALKQ9UM73 1620 aa29.13■■■□□ 2.25
SOX17-201ENST00000297316 CDCA8Q53HL2 280 aa29.12■■■□□ 2.25
SOX17-201ENST00000297316 UBR1Q8IWV7 1749 aa29.11■■■□□ 2.25
SOX17-201ENST00000297316 SBNO2Q9Y2G9 1366 aa29.1■■■□□ 2.25
SOX17-201ENST00000297316 SAFB2Q14151 953 aaKnown RBP eCLIP29.09■■■□□ 2.25
SOX17-201ENST00000297316 CC2D1BQ5T0F9 858 aaKnown RBP29.06■■■□□ 2.24
SOX17-201ENST00000297316 PTPRMP28827 1452 aa29.06■■■□□ 2.24
SOX17-201ENST00000297316 SUPT16HQ9Y5B9 1047 aaKnown RBP29.05■■■□□ 2.24
SOX17-201ENST00000297316 YTHDC2Q9H6S0 1430 aaKnown RBP29.05■■■□□ 2.24
SOX17-201ENST00000297316 SETD1AO15047 1707 aaKnown RBP29.04■■■□□ 2.24
SOX17-201ENST00000297316 NRXN3Q9Y4C0 1643 aa29.04■■■□□ 2.24
SOX17-201ENST00000297316 KTN1Q86UP2 1357 aaKnown RBP29.03■■■□□ 2.24
SOX17-201ENST00000297316 SLC24A1O60721 1099 aa29.02■■■□□ 2.24
SOX17-201ENST00000297316 PARD3Q8TEW0 1356 aa29.01■■■□□ 2.23
SOX17-201ENST00000297316 RALBP1Q15311 655 aa29.01■■■□□ 2.23
SOX17-201ENST00000297316 TMEM2Q9UHN6 1383 aa29■■■□□ 2.23
SOX17-201ENST00000297316 MYBBP1AQ9BQG0 1328 aaKnown RBP28.99■■■□□ 2.23
SOX17-201ENST00000297316 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.99■■■□□ 2.23
SOX17-201ENST00000297316 NLRP1Q9C000 1473 aa28.99■■■□□ 2.23
SOX17-201ENST00000297316 TULP4Q9NRJ4 1543 aa28.99■■■□□ 2.23
SOX17-201ENST00000297316 PRAM1Q96QH2 718 aa28.98■■■□□ 2.23
SOX17-201ENST00000297316 RIMS1Q86UR5 1692 aaKnown RBP28.97■■■□□ 2.23
SOX17-201ENST00000297316 KNSTRNQ9Y448 316 aa28.97■■■□□ 2.23
SOX17-201ENST00000297316 PNISRQ8TF01 805 aaKnown RBP28.94■■■□□ 2.22
SOX17-201ENST00000297316 METP08581 1390 aa28.94■■■□□ 2.22
SOX17-201ENST00000297316 LTKP29376 864 aa28.94■■■□□ 2.22
SOX17-201ENST00000297316 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
SOX17-201ENST00000297316 TMC1Q8TDI8 760 aa28.93■■■□□ 2.22
SOX17-201ENST00000297316 MINK1Q8N4C8 1332 aaPredicted RBP28.93■■■□□ 2.22
SOX17-201ENST00000297316 BCANQ96GW7 911 aa28.93■■■□□ 2.22
SOX17-201ENST00000297316 SLC12A5Q9H2X9 1139 aa28.93■■■□□ 2.22
SOX17-201ENST00000297316 POGKQ9P215 609 aa28.93■■■□□ 2.22
SOX17-201ENST00000297316 BRD4O60885 1362 aaPredicted RBP28.92■■■□□ 2.22
SOX17-201ENST00000297316 CARD14Q9BXL6 1004 aa28.92■■■□□ 2.22
SOX17-201ENST00000297316 CABP2Q9NPB3 220 aa28.92■■■□□ 2.22
SOX17-201ENST00000297316 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
SOX17-201ENST00000297316 HDGFP51858 240 aaKnown RBP28.91■■■□□ 2.22
SOX17-201ENST00000297316 ZBED9Q6R2W3 1325 aa28.9■■■□□ 2.22
SOX17-201ENST00000297316 WAPLQ7Z5K2 1190 aa28.89■■■□□ 2.22
SOX17-201ENST00000297316 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms