RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
COL1A2-201ENST00000297268 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
COL1A2-201ENST00000297268 FAM184AQ8NB25 1140 aa17.39■□□□□ 0.38
COL1A2-201ENST00000297268 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
COL1A2-201ENST00000297268 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
COL1A2-201ENST00000297268 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
COL1A2-201ENST00000297268 RIPK4P57078 832 aa17.39■□□□□ 0.37
COL1A2-201ENST00000297268 AMPHP49418 695 aa17.39■□□□□ 0.37
COL1A2-201ENST00000297268 ISY1Q9ULR0 285 aaKnown RBP17.39■□□□□ 0.37
COL1A2-201ENST00000297268 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
COL1A2-201ENST00000297268 TPM3P06753 285 aa17.38■□□□□ 0.37
COL1A2-201ENST00000297268 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
COL1A2-201ENST00000297268 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
COL1A2-201ENST00000297268 CUX1P39880 1505 aa17.37■□□□□ 0.37
COL1A2-201ENST00000297268 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
COL1A2-201ENST00000297268 MIA2Q96PC5 1412 aa17.37■□□□□ 0.37
COL1A2-201ENST00000297268 IGF1RP08069 1367 aa17.37■□□□□ 0.37
COL1A2-201ENST00000297268 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
COL1A2-201ENST00000297268 CLSTN1O94985 981 aa17.36■□□□□ 0.37
COL1A2-201ENST00000297268 CCAR2Q8N163 923 aaKnown RBP17.36■□□□□ 0.37
COL1A2-201ENST00000297268 ANO2Q9NQ90 1003 aa17.36■□□□□ 0.37
COL1A2-201ENST00000297268 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
COL1A2-201ENST00000297268 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
COL1A2-201ENST00000297268 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
COL1A2-201ENST00000297268 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
COL1A2-201ENST00000297268 RASSF8Q8NHQ8 419 aa17.34■□□□□ 0.37
COL1A2-201ENST00000297268 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
COL1A2-201ENST00000297268 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
COL1A2-201ENST00000297268 MSH5O43196 834 aa17.33■□□□□ 0.36
COL1A2-201ENST00000297268 COG3Q96JB2 828 aa17.33■□□□□ 0.36
COL1A2-201ENST00000297268 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.36
COL1A2-201ENST00000297268 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
COL1A2-201ENST00000297268 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
COL1A2-201ENST00000297268 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
COL1A2-201ENST00000297268 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
COL1A2-201ENST00000297268 CDC45O75419 566 aa17.32■□□□□ 0.36
COL1A2-201ENST00000297268 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
COL1A2-201ENST00000297268 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
COL1A2-201ENST00000297268 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
COL1A2-201ENST00000297268 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
COL1A2-201ENST00000297268 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
COL1A2-201ENST00000297268 TPM2P07951 284 aa17.31■□□□□ 0.36
COL1A2-201ENST00000297268 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
COL1A2-201ENST00000297268 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
COL1A2-201ENST00000297268 RNF214Q8ND24 703 aa17.3■□□□□ 0.36
COL1A2-201ENST00000297268 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
COL1A2-201ENST00000297268 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
COL1A2-201ENST00000297268 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
COL1A2-201ENST00000297268 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
COL1A2-201ENST00000297268 GPS2Q13227 327 aa17.29■□□□□ 0.36
COL1A2-201ENST00000297268 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
COL1A2-201ENST00000297268 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
COL1A2-201ENST00000297268 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
COL1A2-201ENST00000297268 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
COL1A2-201ENST00000297268 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
COL1A2-201ENST00000297268 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
COL1A2-201ENST00000297268 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
COL1A2-201ENST00000297268 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
COL1A2-201ENST00000297268 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
COL1A2-201ENST00000297268 PPP2R1AP30153 589 aa17.28■□□□□ 0.36
COL1A2-201ENST00000297268 MTERF4Q7Z6M4 381 aaKnown RBP17.28■□□□□ 0.36
COL1A2-201ENST00000297268 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
COL1A2-201ENST00000297268 PES1O00541 588 aaKnown RBP17.27■□□□□ 0.36
COL1A2-201ENST00000297268 HOMER1Q86YM7 354 aa17.27■□□□□ 0.35
COL1A2-201ENST00000297268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.26■□□□□ 0.35
COL1A2-201ENST00000297268 GNAI1P63096 354 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
COL1A2-201ENST00000297268 TEX35Q5T0J7 233 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 BCAR3O75815 825 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 NECTIN2Q92692 538 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
COL1A2-201ENST00000297268 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
COL1A2-201ENST00000297268 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
COL1A2-201ENST00000297268 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
COL1A2-201ENST00000297268 TPM1P09493 284 aa17.24■□□□□ 0.35
COL1A2-201ENST00000297268 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 FKBP5Q13451 457 aaPredicted RBP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL1A2-201ENST00000297268 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
COL1A2-201ENST00000297268 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
COL1A2-201ENST00000297268 MBD3O95983 291 aa17.22■□□□□ 0.35
COL1A2-201ENST00000297268 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
COL1A2-201ENST00000297268 HMOX1P09601 288 aa17.21■□□□□ 0.35
COL1A2-201ENST00000297268 PKNOX2Q96KN3 472 aa17.21■□□□□ 0.35
COL1A2-201ENST00000297268 FBXW7Q969H0 707 aa17.21■□□□□ 0.34
COL1A2-201ENST00000297268 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
COL1A2-201ENST00000297268 MTHFSP49914 203 aa17.2■□□□□ 0.34
COL1A2-201ENST00000297268 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
COL1A2-201ENST00000297268 TSPY26PQ9H489 355 aa17.2■□□□□ 0.34
COL1A2-201ENST00000297268 TEFQ10587 303 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms