RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ZKSCAN2Q63HK3 967 aa19.02■□□□□ 0.64
FNDC1-201ENST00000297267 COG3Q96JB2 828 aa19.02■□□□□ 0.64
FNDC1-201ENST00000297267 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.63
FNDC1-201ENST00000297267 C1orf141Q5JVX7 400 aa19.01■□□□□ 0.63
FNDC1-201ENST00000297267 CHMP4CQ96CF2 233 aa19.01■□□□□ 0.63
FNDC1-201ENST00000297267 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
FNDC1-201ENST00000297267 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
FNDC1-201ENST00000297267 SMARCA2P51531 1590 aa19■□□□□ 0.63
FNDC1-201ENST00000297267 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
FNDC1-201ENST00000297267 VPS37CA5D8V6 355 aaPredicted RBP18.99■□□□□ 0.63
FNDC1-201ENST00000297267 PCMTD1Q96MG8 357 aaPredicted RBP18.99■□□□□ 0.63
FNDC1-201ENST00000297267 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
FNDC1-201ENST00000297267 KLHL34Q8N239 644 aa18.99■□□□□ 0.63
FNDC1-201ENST00000297267 RNF214Q8ND24 703 aa18.98■□□□□ 0.63
FNDC1-201ENST00000297267 HTATSF1O43719 755 aaKnown RBP18.98■□□□□ 0.63
FNDC1-201ENST00000297267 DIAPH3Q9NSV4 1193 aa18.98■□□□□ 0.63
FNDC1-201ENST00000297267 TMX4Q9H1E5 349 aaPredicted RBP18.97■□□□□ 0.63
FNDC1-201ENST00000297267 TTLL5Q6EMB2 1281 aa18.97■□□□□ 0.63
FNDC1-201ENST00000297267 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.97■□□□□ 0.63
FNDC1-201ENST00000297267 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
FNDC1-201ENST00000297267 DHX37Q8IY37 1157 aaKnown RBP18.97■□□□□ 0.63
FNDC1-201ENST00000297267 SKIDA1Q1XH10 827 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 BRPF3Q9ULD4 1205 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 IL27Q8NEV9 243 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 GOLGA6L19H0YKK7 550 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 PTMSP20962 102 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
FNDC1-201ENST00000297267 ZNF771Q7L3S4 317 aaPredicted RBP18.96■□□□□ 0.62
FNDC1-201ENST00000297267 GOLGA6L1Q8N7Z2 621 aa18.95■□□□□ 0.62
FNDC1-201ENST00000297267 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
FNDC1-201ENST00000297267 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
FNDC1-201ENST00000297267 E9PSI1 815 aa18.94■□□□□ 0.62
FNDC1-201ENST00000297267 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
FNDC1-201ENST00000297267 BECN2A8MW95 431 aa18.93■□□□□ 0.62
FNDC1-201ENST00000297267 CEBPZQ03701 1054 aaKnown RBP18.93■□□□□ 0.62
FNDC1-201ENST00000297267 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
FNDC1-201ENST00000297267 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
FNDC1-201ENST00000297267 DHX16O60231 1041 aaKnown RBP18.93■□□□□ 0.62
FNDC1-201ENST00000297267 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
FNDC1-201ENST00000297267 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
FNDC1-201ENST00000297267 CFAP44Q96MT7 982 aa18.92■□□□□ 0.62
FNDC1-201ENST00000297267 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
FNDC1-201ENST00000297267 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
FNDC1-201ENST00000297267 DZIP1LQ8IYY4 767 aaKnown RBP18.92■□□□□ 0.62
FNDC1-201ENST00000297267 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
FNDC1-201ENST00000297267 RBM10P98175 930 aaKnown RBP18.91■□□□□ 0.62
FNDC1-201ENST00000297267 CSPP1Q1MSJ5 1256 aa18.91■□□□□ 0.62
FNDC1-201ENST00000297267 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
FNDC1-201ENST00000297267 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
FNDC1-201ENST00000297267 NFXL1Q6ZNB6 911 aa18.91■□□□□ 0.62
FNDC1-201ENST00000297267 TEFQ10587 303 aa18.91■□□□□ 0.62
FNDC1-201ENST00000297267 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
FNDC1-201ENST00000297267 CCDC184Q52MB2 194 aa18.9■□□□□ 0.62
FNDC1-201ENST00000297267 PHF14O94880 888 aa18.9■□□□□ 0.62
FNDC1-201ENST00000297267 NFKBIBQ15653 356 aa18.9■□□□□ 0.62
FNDC1-201ENST00000297267 BCAR3O75815 825 aa18.9■□□□□ 0.62
FNDC1-201ENST00000297267 TSR2Q969E8 191 aaKnown RBP18.9■□□□□ 0.62
FNDC1-201ENST00000297267 TPM3P06753 285 aa18.89■□□□□ 0.62
FNDC1-201ENST00000297267 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
FNDC1-201ENST00000297267 PSME1Q06323 249 aa18.88■□□□□ 0.61
FNDC1-201ENST00000297267 TTC5Q8N0Z6 440 aa18.88■□□□□ 0.61
FNDC1-201ENST00000297267 R3HCC1Q9Y3T6 440 aaKnown RBP18.88■□□□□ 0.61
FNDC1-201ENST00000297267 EVC2Q86UK5 1308 aa18.88■□□□□ 0.61
FNDC1-201ENST00000297267 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
FNDC1-201ENST00000297267 AKAP17AQ02040 695 aaKnown RBP18.87■□□□□ 0.61
FNDC1-201ENST00000297267 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
FNDC1-201ENST00000297267 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
FNDC1-201ENST00000297267 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
FNDC1-201ENST00000297267 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
FNDC1-201ENST00000297267 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
FNDC1-201ENST00000297267 STK3Q13188 491 aa18.85■□□□□ 0.61
FNDC1-201ENST00000297267 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
FNDC1-201ENST00000297267 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
FNDC1-201ENST00000297267 DNAJC2Q99543 621 aaKnown RBP18.85■□□□□ 0.61
FNDC1-201ENST00000297267 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
FNDC1-201ENST00000297267 PDILTQ8N807 584 aa18.84■□□□□ 0.61
FNDC1-201ENST00000297267 ATP2B1P20020 1258 aa18.83■□□□□ 0.6
FNDC1-201ENST00000297267 WASHC4Q2M389 1173 aa18.82■□□□□ 0.6
FNDC1-201ENST00000297267 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
FNDC1-201ENST00000297267 CAVIN1Q6NZI2 390 aaKnown RBP18.82■□□□□ 0.6
FNDC1-201ENST00000297267 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
FNDC1-201ENST00000297267 NAP1L1P55209 391 aaKnown RBP18.82■□□□□ 0.6
FNDC1-201ENST00000297267 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
FNDC1-201ENST00000297267 SIL1Q9H173 461 aa18.81■□□□□ 0.6
FNDC1-201ENST00000297267 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
FNDC1-201ENST00000297267 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
FNDC1-201ENST00000297267 SMC3Q9UQE7 1217 aa18.8■□□□□ 0.6
FNDC1-201ENST00000297267 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
FNDC1-201ENST00000297267 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
FNDC1-201ENST00000297267 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
FNDC1-201ENST00000297267 CEP89Q96ST8 783 aa18.79■□□□□ 0.6
FNDC1-201ENST00000297267 CPLX1O14810 134 aa18.79■□□□□ 0.6
FNDC1-201ENST00000297267 TRIM29Q14134 588 aa18.79■□□□□ 0.6
FNDC1-201ENST00000297267 SYNE3Q6ZMZ3 975 aa18.79■□□□□ 0.6
FNDC1-201ENST00000297267 MTHFSP49914 203 aa18.78■□□□□ 0.6
FNDC1-201ENST00000297267 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
FNDC1-201ENST00000297267 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
FNDC1-201ENST00000297267 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
FNDC1-201ENST00000297267 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
FNDC1-201ENST00000297267 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms