RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 RIMS2Q9UQ26 1411 aa40.13■■■■■ 4.01
CHCHD4-201ENST00000295767 AEBP2Q6ZN18 517 aaPredicted RBP40.12■■■■■ 4.01
CHCHD4-201ENST00000295767 RPGRIP1LQ68CZ1 1315 aa40.09■■■■■ 4.01
CHCHD4-201ENST00000295767 HSPA2P54652 639 aa40.09■■■■■ 4.01
CHCHD4-201ENST00000295767 L3MBTL2Q969R5 705 aa40.09■■■■■ 4.01
CHCHD4-201ENST00000295767 POLR1AO95602 1720 aaPredicted RBP40.07■■■■■ 4.01
CHCHD4-201ENST00000295767 NUTM2DQ5VT03 806 aaPredicted RBP40.04■■■■■ 4
CHCHD4-201ENST00000295767 DCAF11Q8TEB1 546 aa40.04■■■■■ 4
CHCHD4-201ENST00000295767 MYOM2P54296 1465 aa40.01■■■■■ 4
CHCHD4-201ENST00000295767 SCAF11Q99590 1463 aaKnown RBP40■■■■□ 3.99
CHCHD4-201ENST00000295767 LTKP29376 864 aa40■■■■□ 3.99
CHCHD4-201ENST00000295767 TXNDC2Q86VQ3 553 aa39.98■■■■□ 3.99
CHCHD4-201ENST00000295767 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.98■■■■□ 3.99
CHCHD4-201ENST00000295767 TIMELESSQ9UNS1 1208 aa39.98■■■■□ 3.99
CHCHD4-201ENST00000295767 KDM2AQ9Y2K7 1162 aa39.98■■■■□ 3.99
CHCHD4-201ENST00000295767 EID1Q9Y6B2 187 aa39.98■■■■□ 3.99
CHCHD4-201ENST00000295767 HDGFP51858 240 aaKnown RBP39.97■■■■□ 3.99
CHCHD4-201ENST00000295767 STRCQ7RTU9 1775 aa39.96■■■■□ 3.99
CHCHD4-201ENST00000295767 ANKLE2Q86XL3 938 aa39.95■■■■□ 3.99
CHCHD4-201ENST00000295767 VGFO15240 615 aaPredicted RBP39.94■■■■□ 3.99
CHCHD4-201ENST00000295767 PPP1R15AO75807 674 aaPredicted RBP39.94■■■■□ 3.99
CHCHD4-201ENST00000295767 ADGRF5Q8IZF2 1346 aa39.93■■■■□ 3.98
CHCHD4-201ENST00000295767 NRXN1Q9ULB1 1477 aa39.92■■■■□ 3.98
CHCHD4-201ENST00000295767 STAC3Q96MF2 364 aa39.91■■■■□ 3.98
CHCHD4-201ENST00000295767 IQGAP1P46940 1657 aa39.9■■■■□ 3.98
CHCHD4-201ENST00000295767 NCKAP5LQ9HCH0 1330 aa39.89■■■■□ 3.98
CHCHD4-201ENST00000295767 NRXN3Q9Y4C0 1643 aa39.88■■■■□ 3.97
CHCHD4-201ENST00000295767 PLEKHG1Q9ULL1 1385 aa39.88■■■■□ 3.97
CHCHD4-201ENST00000295767 PIK3C2GO75747 1445 aa39.86■■■■□ 3.97
CHCHD4-201ENST00000295767 MED14O60244 1454 aa39.86■■■■□ 3.97
CHCHD4-201ENST00000295767 SENP3Q9H4L4 574 aaPredicted RBP39.86■■■■□ 3.97
CHCHD4-201ENST00000295767 PRAG1Q86YV5 1406 aa39.85■■■■□ 3.97
CHCHD4-201ENST00000295767 SETBP1Q9Y6X0 1596 aa39.85■■■■□ 3.97
CHCHD4-201ENST00000295767 NPHP4O75161 1426 aaPredicted RBP39.82■■■■□ 3.96
CHCHD4-201ENST00000295767 SETD1AO15047 1707 aaKnown RBP39.78■■■■□ 3.96
CHCHD4-201ENST00000295767 LAMC1P11047 1609 aa39.78■■■■□ 3.96
CHCHD4-201ENST00000295767 NBPF8Q3BBV2 869 aa39.76■■■■□ 3.96
CHCHD4-201ENST00000295767 TRPM1Q7Z4N2 1603 aa39.76■■■■□ 3.96
CHCHD4-201ENST00000295767 ALKQ9UM73 1620 aa39.76■■■■□ 3.96
CHCHD4-201ENST00000295767 KIAA1210Q9ULL0 1709 aa39.76■■■■□ 3.96
CHCHD4-201ENST00000295767 BCANQ96GW7 911 aa39.76■■■■□ 3.95
CHCHD4-201ENST00000295767 ADAMTS13Q76LX8 1427 aa39.75■■■■□ 3.95
CHCHD4-201ENST00000295767 DIP2AQ14689 1571 aa39.72■■■■□ 3.95
CHCHD4-201ENST00000295767 CFAP70Q5T0N1 1121 aa39.69■■■■□ 3.94
CHCHD4-201ENST00000295767 SLC26A8Q96RN1 970 aa39.69■■■■□ 3.94
CHCHD4-201ENST00000295767 C14orf93Q9H972 538 aaKnown RBP39.67■■■■□ 3.94
CHCHD4-201ENST00000295767 ZEB1P37275 1124 aaPredicted RBP39.65■■■■□ 3.94
CHCHD4-201ENST00000295767 ASXL1Q8IXJ9 1541 aa39.64■■■■□ 3.94
CHCHD4-201ENST00000295767 RALGAPBQ86X10 1494 aa39.63■■■■□ 3.93
CHCHD4-201ENST00000295767 TBX22Q9Y458 520 aa39.62■■■■□ 3.93
CHCHD4-201ENST00000295767 ADGRB1O14514 1584 aa39.6■■■■□ 3.93
CHCHD4-201ENST00000295767 METP08581 1390 aa39.59■■■■□ 3.93
CHCHD4-201ENST00000295767 NBPF1Q3BBV0 1214 aa39.57■■■■□ 3.92
CHCHD4-201ENST00000295767 DMRT2Q9Y5R5 561 aa39.56■■■■□ 3.92
CHCHD4-201ENST00000295767 CHD2O14647 1828 aaKnown RBP39.55■■■■□ 3.92
CHCHD4-201ENST00000295767 TMEM132EQ6IEE7 984 aa39.54■■■■□ 3.92
CHCHD4-201ENST00000295767 ROCK2O75116 1388 aaKnown RBP39.54■■■■□ 3.92
CHCHD4-201ENST00000295767 PIK3R4Q99570 1358 aa39.49■■■■□ 3.91
CHCHD4-201ENST00000295767 GPRASP1Q5JY77 1395 aa39.48■■■■□ 3.91
CHCHD4-201ENST00000295767 PTPRUQ92729 1446 aa39.48■■■■□ 3.91
CHCHD4-201ENST00000295767 XRN1Q8IZH2 1706 aaKnown RBP39.47■■■■□ 3.91
CHCHD4-201ENST00000295767 KNDC1Q76NI1 1749 aa39.46■■■■□ 3.91
CHCHD4-201ENST00000295767 YTHDC2Q9H6S0 1430 aaKnown RBP39.45■■■■□ 3.91
CHCHD4-201ENST00000295767 STRCP1A6NGW2 1772 aa39.45■■■■□ 3.91
CHCHD4-201ENST00000295767 NWD1Q149M9 1564 aa39.44■■■■□ 3.9
CHCHD4-201ENST00000295767 LRPPRCP42704 1394 aaKnown RBP39.42■■■■□ 3.9
CHCHD4-201ENST00000295767 CARD11Q9BXL7 1154 aa39.4■■■■□ 3.9
CHCHD4-201ENST00000295767 ARHGEF28Q8N1W1 1705 aaKnown RBP39.39■■■■□ 3.9
CHCHD4-201ENST00000295767 STK26Q9P289 416 aa39.39■■■■□ 3.9
CHCHD4-201ENST00000295767 AMOTL2Q9Y2J4 779 aa39.37■■■■□ 3.89
CHCHD4-201ENST00000295767 CPS1P31327 1500 aa39.36■■■■□ 3.89
CHCHD4-201ENST00000295767 TECPR2O15040 1411 aa39.35■■■■□ 3.89
CHCHD4-201ENST00000295767 KCNA6P17658 529 aa39.35■■■■□ 3.89
CHCHD4-201ENST00000295767 ABCC11Q96J66 1382 aa39.35■■■■□ 3.89
CHCHD4-201ENST00000295767 ZNF335Q9H4Z2 1342 aaPredicted RBP39.34■■■■□ 3.89
CHCHD4-201ENST00000295767 TRAK1Q9UPV9 953 aa39.33■■■■□ 3.89
CHCHD4-201ENST00000295767 DLC1Q96QB1 1528 aa39.33■■■■□ 3.89
CHCHD4-201ENST00000295767 NKTRP30414 1462 aaKnown RBP39.29■■■■□ 3.88
CHCHD4-201ENST00000295767 PTCH1Q13635 1447 aa39.29■■■■□ 3.88
CHCHD4-201ENST00000295767 ROBO2Q9HCK4 1378 aa39.27■■■■□ 3.88
CHCHD4-201ENST00000295767 USP47Q96K76 1375 aa39.24■■■■□ 3.87
CHCHD4-201ENST00000295767 FAM135BQ49AJ0 1406 aa39.22■■■■□ 3.87
CHCHD4-201ENST00000295767 QRICH2Q9H0J4 1663 aa39.21■■■■□ 3.87
CHCHD4-201ENST00000295767 EIF3AQ14152 1382 aaKnown RBP39.21■■■■□ 3.87
CHCHD4-201ENST00000295767 LTBP4Q8N2S1 1624 aa39.2■■■■□ 3.87
CHCHD4-201ENST00000295767 PLEKHH1Q9ULM0 1364 aa39.19■■■■□ 3.86
CHCHD4-201ENST00000295767 SIRT1Q96EB6 747 aa39.18■■■■□ 3.86
CHCHD4-201ENST00000295767 PRAM1Q96QH2 718 aa39.18■■■■□ 3.86
CHCHD4-201ENST00000295767 XIRP1Q702N8 1843 aaKnown RBP39.18■■■■□ 3.86
CHCHD4-201ENST00000295767 WAPLQ7Z5K2 1190 aa39.18■■■■□ 3.86
CHCHD4-201ENST00000295767 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.14■■■■□ 3.86
CHCHD4-201ENST00000295767 EIF4G2P78344 907 aaKnown RBP eCLIP39.14■■■■□ 3.86
CHCHD4-201ENST00000295767 POGKQ9P215 609 aa39.14■■■■□ 3.86
CHCHD4-201ENST00000295767 CENPJQ9HC77 1338 aaPredicted RBP39.13■■■■□ 3.85
CHCHD4-201ENST00000295767 LRRC7Q96NW7 1537 aa39.13■■■■□ 3.85
CHCHD4-201ENST00000295767 PROSER2Q86WR7 435 aaPredicted RBP39.13■■■■□ 3.85
CHCHD4-201ENST00000295767 SAFB2Q14151 953 aaKnown RBP eCLIP39.12■■■■□ 3.85
CHCHD4-201ENST00000295767 NALCNQ8IZF0 1738 aa39.12■■■■□ 3.85
CHCHD4-201ENST00000295767 RBM33Q96EV2 1170 aaKnown RBP39.11■■■■□ 3.85
CHCHD4-201ENST00000295767 ST20-MTHFSA0A0A6YYL1 179 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms