RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 USP35Q9P2H5 1018 aa25.14■■□□□ 1.61
LSM12-201ENST00000293406 SCAF11Q99590 1463 aaKnown RBP25.14■■□□□ 1.61
LSM12-201ENST00000293406 ZNF521Q96K83 1311 aa25.13■■□□□ 1.61
LSM12-201ENST00000293406 CENPQQ7L2Z9 268 aaPredicted RBP25.12■■□□□ 1.61
LSM12-201ENST00000293406 ASXL1Q8IXJ9 1541 aa25.12■■□□□ 1.61
LSM12-201ENST00000293406 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
LSM12-201ENST00000293406 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
LSM12-201ENST00000293406 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
LSM12-201ENST00000293406 ABCC1P33527 1531 aa25.12■■□□□ 1.61
LSM12-201ENST00000293406 TRPM2O94759 1503 aa25.11■■□□□ 1.61
LSM12-201ENST00000293406 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.11■■□□□ 1.61
LSM12-201ENST00000293406 SCAPERQ9BY12 1400 aa25.11■■□□□ 1.61
LSM12-201ENST00000293406 PIK3C2GO75747 1445 aa25.1■■□□□ 1.61
LSM12-201ENST00000293406 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
LSM12-201ENST00000293406 SPHKAPQ2M3C7 1700 aa25.09■■□□□ 1.61
LSM12-201ENST00000293406 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
LSM12-201ENST00000293406 CEP152O94986 1710 aa25.07■■□□□ 1.6
LSM12-201ENST00000293406 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
LSM12-201ENST00000293406 NPC1L1Q9UHC9 1359 aa25.06■■□□□ 1.6
LSM12-201ENST00000293406 PTPRTO14522 1441 aa25.06■■□□□ 1.6
LSM12-201ENST00000293406 SLFN5Q08AF3 891 aa25.06■■□□□ 1.6
LSM12-201ENST00000293406 EIF3AQ14152 1382 aaKnown RBP25.05■■□□□ 1.6
LSM12-201ENST00000293406 CLTCL1P53675 1640 aa25.03■■□□□ 1.6
LSM12-201ENST00000293406 ZCCHC11Q5TAX3 1644 aaKnown RBP25.03■■□□□ 1.6
LSM12-201ENST00000293406 MYOM1P52179 1685 aa25.02■■□□□ 1.6
LSM12-201ENST00000293406 RTEL1-TNFRSF6BF6WH68 1400 aa25.02■■□□□ 1.6
LSM12-201ENST00000293406 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
LSM12-201ENST00000293406 TRMT2AQ8IZ69 625 aaKnown RBP25■■□□□ 1.59
LSM12-201ENST00000293406 AFAP1Q8N556 730 aa25■■□□□ 1.59
LSM12-201ENST00000293406 FAM161AQ3B820 660 aa25■■□□□ 1.59
LSM12-201ENST00000293406 ZFYVE16Q7Z3T8 1539 aa24.99■■□□□ 1.59
LSM12-201ENST00000293406 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
LSM12-201ENST00000293406 APAF1O14727 1248 aa24.97■■□□□ 1.59
LSM12-201ENST00000293406 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
LSM12-201ENST00000293406 DEPDC5O75140 1603 aa24.96■■□□□ 1.59
LSM12-201ENST00000293406 TET3O43151 1660 aa24.96■■□□□ 1.59
LSM12-201ENST00000293406 C8orf34Q49A92 452 aa24.96■■□□□ 1.59
LSM12-201ENST00000293406 KANK1Q14678 1352 aa24.95■■□□□ 1.59
LSM12-201ENST00000293406 SPINK5Q9NQ38 1064 aaPredicted RBP24.95■■□□□ 1.58
LSM12-201ENST00000293406 DAXXQ9UER7 740 aaPredicted RBP24.95■■□□□ 1.58
LSM12-201ENST00000293406 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.58
LSM12-201ENST00000293406 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.58
LSM12-201ENST00000293406 SLC24A1O60721 1099 aa24.95■■□□□ 1.58
LSM12-201ENST00000293406 E9PSI1 815 aa24.93■■□□□ 1.58
LSM12-201ENST00000293406 SLC4A3P48751 1232 aa24.91■■□□□ 1.58
LSM12-201ENST00000293406 RGS3P49796 1198 aa24.91■■□□□ 1.58
LSM12-201ENST00000293406 ARAP3Q8WWN8 1544 aa24.91■■□□□ 1.58
LSM12-201ENST00000293406 BCAR3O75815 825 aa24.9■■□□□ 1.58
LSM12-201ENST00000293406 CFAP70Q5T0N1 1121 aa24.9■■□□□ 1.58
LSM12-201ENST00000293406 ERVK-7P63135 1459 aa24.9■■□□□ 1.58
LSM12-201ENST00000293406 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
LSM12-201ENST00000293406 NEURL4Q96JN8 1562 aa24.89■■□□□ 1.57
LSM12-201ENST00000293406 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
LSM12-201ENST00000293406 CARD14Q9BXL6 1004 aa24.87■■□□□ 1.57
LSM12-201ENST00000293406 MAP3K4Q9Y6R4 1608 aa24.87■■□□□ 1.57
LSM12-201ENST00000293406 KIF3BO15066 747 aa24.87■■□□□ 1.57
LSM12-201ENST00000293406 NFKBIBQ15653 356 aa24.86■■□□□ 1.57
LSM12-201ENST00000293406 MYOM2P54296 1465 aa24.86■■□□□ 1.57
LSM12-201ENST00000293406 ATP7AQ04656 1500 aa24.86■■□□□ 1.57
LSM12-201ENST00000293406 ABCA6Q8N139 1617 aa24.84■■□□□ 1.57
LSM12-201ENST00000293406 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
LSM12-201ENST00000293406 DMRT2Q9Y5R5 561 aa24.84■■□□□ 1.57
LSM12-201ENST00000293406 INO80Q9ULG1 1556 aaPredicted RBP24.83■■□□□ 1.57
LSM12-201ENST00000293406 UGGT1Q9NYU2 1555 aa24.82■■□□□ 1.56
LSM12-201ENST00000293406 IL27Q8NEV9 243 aa24.82■■□□□ 1.56
LSM12-201ENST00000293406 CGNL1Q0VF96 1302 aa24.81■■□□□ 1.56
LSM12-201ENST00000293406 PDE3AQ14432 1141 aa24.81■■□□□ 1.56
LSM12-201ENST00000293406 POLR3AO14802 1390 aaPredicted RBP24.8■■□□□ 1.56
LSM12-201ENST00000293406 GSE1Q14687 1217 aa24.8■■□□□ 1.56
LSM12-201ENST00000293406 CENPJQ9HC77 1338 aaPredicted RBP24.8■■□□□ 1.56
LSM12-201ENST00000293406 FANCAO15360 1455 aa24.79■■□□□ 1.56
LSM12-201ENST00000293406 IGHDP01880 384 aa24.79■■□□□ 1.56
LSM12-201ENST00000293406 NINLQ9Y2I6 1382 aa24.78■■□□□ 1.56
LSM12-201ENST00000293406 WWC1Q8IX03 1113 aa24.78■■□□□ 1.56
LSM12-201ENST00000293406 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
LSM12-201ENST00000293406 SBNO2Q9Y2G9 1366 aa24.77■■□□□ 1.56
LSM12-201ENST00000293406 KIF1BO60333 1816 aa24.76■■□□□ 1.56
LSM12-201ENST00000293406 MROH1Q8NDA8 1641 aa24.76■■□□□ 1.55
LSM12-201ENST00000293406 ABCA9Q8IUA7 1624 aa24.75■■□□□ 1.55
LSM12-201ENST00000293406 CLUAP1Q96AJ1 413 aa24.75■■□□□ 1.55
LSM12-201ENST00000293406 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
LSM12-201ENST00000293406 IFT172Q9UG01 1749 aa24.74■■□□□ 1.55
LSM12-201ENST00000293406 EFCAB6Q5THR3 1501 aa24.73■■□□□ 1.55
LSM12-201ENST00000293406 PANK1Q8TE04 598 aa24.73■■□□□ 1.55
LSM12-201ENST00000293406 COG6Q9Y2V7 657 aa24.73■■□□□ 1.55
LSM12-201ENST00000293406 ADGRL1O94910 1474 aa24.73■■□□□ 1.55
LSM12-201ENST00000293406 NRXN1Q9ULB1 1477 aa24.73■■□□□ 1.55
LSM12-201ENST00000293406 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
LSM12-201ENST00000293406 MAPK8IP3Q9UPT6 1336 aa24.72■■□□□ 1.55
LSM12-201ENST00000293406 NSD3Q9BZ95 1437 aa24.71■■□□□ 1.55
LSM12-201ENST00000293406 MROH2AA6NES4 1674 aa24.7■■□□□ 1.54
LSM12-201ENST00000293406 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
LSM12-201ENST00000293406 FRAT1Q92837 279 aaPredicted RBP24.69■■□□□ 1.54
LSM12-201ENST00000293406 RUNDC1Q96C34 613 aa24.69■■□□□ 1.54
LSM12-201ENST00000293406 NOS1P29475 1434 aa24.68■■□□□ 1.54
LSM12-201ENST00000293406 TNNT2P45379 298 aaPredicted RBP24.68■■□□□ 1.54
LSM12-201ENST00000293406 RTN4Q9NQC3 1192 aaKnown RBP24.68■■□□□ 1.54
LSM12-201ENST00000293406 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
LSM12-201ENST00000293406 SHPRHQ149N8 1683 aa24.67■■□□□ 1.54
LSM12-201ENST00000293406 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms