RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 TNNQ9UQP3 1299 aa20.4■□□□□ 0.86
CACNA2D3-201ENST00000288197 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.86
CACNA2D3-201ENST00000288197 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.86
CACNA2D3-201ENST00000288197 L1TD1Q5T7N2 865 aaKnown RBP20.39■□□□□ 0.85
CACNA2D3-201ENST00000288197 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
CACNA2D3-201ENST00000288197 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
CACNA2D3-201ENST00000288197 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
CACNA2D3-201ENST00000288197 MTHFSP49914 203 aa20.37■□□□□ 0.85
CACNA2D3-201ENST00000288197 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
CACNA2D3-201ENST00000288197 KIAA0586Q9BVV6 1533 aa20.37■□□□□ 0.85
CACNA2D3-201ENST00000288197 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
CACNA2D3-201ENST00000288197 ARID3AQ99856 593 aa20.35■□□□□ 0.85
CACNA2D3-201ENST00000288197 WASHC2CQ9Y4E1 1318 aa20.35■□□□□ 0.85
CACNA2D3-201ENST00000288197 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
CACNA2D3-201ENST00000288197 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
CACNA2D3-201ENST00000288197 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
CACNA2D3-201ENST00000288197 SOX12O15370 315 aa20.34■□□□□ 0.85
CACNA2D3-201ENST00000288197 WWC1Q8IX03 1113 aa20.32■□□□□ 0.84
CACNA2D3-201ENST00000288197 KANK1Q14678 1352 aa20.31■□□□□ 0.84
CACNA2D3-201ENST00000288197 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
CACNA2D3-201ENST00000288197 WDR62O43379 1518 aa20.3■□□□□ 0.84
CACNA2D3-201ENST00000288197 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
CACNA2D3-201ENST00000288197 ZKSCAN2Q63HK3 967 aa20.3■□□□□ 0.84
CACNA2D3-201ENST00000288197 EIF3AQ14152 1382 aaKnown RBP20.3■□□□□ 0.84
CACNA2D3-201ENST00000288197 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
CACNA2D3-201ENST00000288197 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
CACNA2D3-201ENST00000288197 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
CACNA2D3-201ENST00000288197 DZIP1LQ8IYY4 767 aaKnown RBP20.29■□□□□ 0.84
CACNA2D3-201ENST00000288197 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
CACNA2D3-201ENST00000288197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
CACNA2D3-201ENST00000288197 FOXD4L5Q5VV16 416 aaPredicted RBP20.28■□□□□ 0.84
CACNA2D3-201ENST00000288197 FOXD4L4Q8WXT5 416 aaPredicted RBP20.28■□□□□ 0.84
CACNA2D3-201ENST00000288197 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
CACNA2D3-201ENST00000288197 GLIPR1L2Q4G1C9 344 aa20.27■□□□□ 0.84
CACNA2D3-201ENST00000288197 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.84
CACNA2D3-201ENST00000288197 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
CACNA2D3-201ENST00000288197 CABP2Q9NPB3 220 aa20.27■□□□□ 0.84
CACNA2D3-201ENST00000288197 PLEKHH2Q8IVE3 1493 aa20.27■□□□□ 0.83
CACNA2D3-201ENST00000288197 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.83
CACNA2D3-201ENST00000288197 BCORL1Q5H9F3 1711 aa20.26■□□□□ 0.83
CACNA2D3-201ENST00000288197 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
CACNA2D3-201ENST00000288197 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 EXOSC9Q06265 439 aaKnown RBP20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 GOLGA6L22H0YM25 854 aa20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 C1orf115Q9H7X2 142 aa20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 PDE3AQ14432 1141 aa20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
CACNA2D3-201ENST00000288197 RLBP1P12271 317 aa20.24■□□□□ 0.83
CACNA2D3-201ENST00000288197 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
CACNA2D3-201ENST00000288197 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
CACNA2D3-201ENST00000288197 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
CACNA2D3-201ENST00000288197 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
CACNA2D3-201ENST00000288197 DNMT1P26358 1616 aaKnown RBP20.22■□□□□ 0.83
CACNA2D3-201ENST00000288197 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
CACNA2D3-201ENST00000288197 TRAK2O60296 914 aa20.22■□□□□ 0.83
CACNA2D3-201ENST00000288197 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
CACNA2D3-201ENST00000288197 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
CACNA2D3-201ENST00000288197 RIPK4P57078 832 aa20.21■□□□□ 0.83
CACNA2D3-201ENST00000288197 NOL8Q76FK4 1167 aaKnown RBP20.2■□□□□ 0.82
CACNA2D3-201ENST00000288197 ADGRF5Q8IZF2 1346 aa20.2■□□□□ 0.82
CACNA2D3-201ENST00000288197 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
CACNA2D3-201ENST00000288197 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
CACNA2D3-201ENST00000288197 PANK2Q9BZ23 570 aa20.19■□□□□ 0.82
CACNA2D3-201ENST00000288197 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
CACNA2D3-201ENST00000288197 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
CACNA2D3-201ENST00000288197 HMOX1P09601 288 aa20.18■□□□□ 0.82
CACNA2D3-201ENST00000288197 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 CCDC141Q6ZP82 1450 aa20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
CACNA2D3-201ENST00000288197 CARD14Q9BXL6 1004 aa20.16■□□□□ 0.82
CACNA2D3-201ENST00000288197 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
CACNA2D3-201ENST00000288197 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
CACNA2D3-201ENST00000288197 ATP10BO94823 1461 aa20.16■□□□□ 0.82
CACNA2D3-201ENST00000288197 GBP4Q96PP9 640 aa20.16■□□□□ 0.82
CACNA2D3-201ENST00000288197 MCM4P33991 863 aa20.15■□□□□ 0.82
CACNA2D3-201ENST00000288197 KIF14Q15058 1648 aa20.15■□□□□ 0.82
CACNA2D3-201ENST00000288197 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
CACNA2D3-201ENST00000288197 ABCA5Q8WWZ7 1642 aa20.15■□□□□ 0.82
CACNA2D3-201ENST00000288197 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.82
CACNA2D3-201ENST00000288197 FAM43AQ8N2R8 423 aa20.14■□□□□ 0.82
CACNA2D3-201ENST00000288197 NUTM2FA1L443 756 aa20.14■□□□□ 0.81
CACNA2D3-201ENST00000288197 PLCB2Q00722 1185 aa20.14■□□□□ 0.81
CACNA2D3-201ENST00000288197 KDM5CP41229 1560 aa20.13■□□□□ 0.81
CACNA2D3-201ENST00000288197 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
CACNA2D3-201ENST00000288197 FBLN1P23142 703 aa20.12■□□□□ 0.81
CACNA2D3-201ENST00000288197 MVPQ14764 893 aaKnown RBP20.12■□□□□ 0.81
CACNA2D3-201ENST00000288197 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
CACNA2D3-201ENST00000288197 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
CACNA2D3-201ENST00000288197 MLECQ14165 292 aa20.12■□□□□ 0.81
CACNA2D3-201ENST00000288197 PTMAP06454 111 aaKnown RBP20.11■□□□□ 0.81
CACNA2D3-201ENST00000288197 FAM135AQ9P2D6 1515 aa20.11■□□□□ 0.81
CACNA2D3-201ENST00000288197 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
CACNA2D3-201ENST00000288197 A2MP01023 1474 aa20.1■□□□□ 0.81
CACNA2D3-201ENST00000288197 KIAA0556O60303 1618 aa20.1■□□□□ 0.81
CACNA2D3-201ENST00000288197 SSH1Q8WYL5 1049 aa20.1■□□□□ 0.81
CACNA2D3-201ENST00000288197 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
CACNA2D3-201ENST00000288197 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms