RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
LSM11-201ENST00000286307 TCERG1O14776 1098 aaKnown RBP23.99■■□□□ 1.43
LSM11-201ENST00000286307 MYBBP1AQ9BQG0 1328 aaKnown RBP23.98■■□□□ 1.43
LSM11-201ENST00000286307 MIA2Q96PC5 1412 aa23.98■■□□□ 1.43
LSM11-201ENST00000286307 AIMP1Q12904 312 aaKnown RBP23.98■■□□□ 1.43
LSM11-201ENST00000286307 ANKRD50Q9ULJ7 1429 aa23.98■■□□□ 1.43
LSM11-201ENST00000286307 CFTRP13569 1480 aa23.98■■□□□ 1.43
LSM11-201ENST00000286307 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
LSM11-201ENST00000286307 RIPK4P57078 832 aa23.97■■□□□ 1.43
LSM11-201ENST00000286307 NRDCO43847 1150 aa23.96■■□□□ 1.43
LSM11-201ENST00000286307 TSPYL4Q9UJ04 414 aa23.96■■□□□ 1.43
LSM11-201ENST00000286307 RILPL2Q969X0 211 aa23.95■■□□□ 1.43
LSM11-201ENST00000286307 SAMD1Q6SPF0 538 aaPredicted RBP23.95■■□□□ 1.42
LSM11-201ENST00000286307 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
LSM11-201ENST00000286307 PRAM1Q96QH2 718 aa23.95■■□□□ 1.42
LSM11-201ENST00000286307 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.42
LSM11-201ENST00000286307 DRC7Q8IY82 874 aa23.94■■□□□ 1.42
LSM11-201ENST00000286307 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
LSM11-201ENST00000286307 RIC3Q7Z5B4 369 aa23.92■■□□□ 1.42
LSM11-201ENST00000286307 XPCQ01831 940 aaPredicted RBP23.92■■□□□ 1.42
LSM11-201ENST00000286307 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
LSM11-201ENST00000286307 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
LSM11-201ENST00000286307 FKBP5Q13451 457 aaPredicted RBP23.9■■□□□ 1.42
LSM11-201ENST00000286307 CFAP70Q5T0N1 1121 aa23.9■■□□□ 1.42
LSM11-201ENST00000286307 TCEAL9Q9UHQ7 104 aa23.89■■□□□ 1.42
LSM11-201ENST00000286307 APPP05067 770 aa23.89■■□□□ 1.42
LSM11-201ENST00000286307 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
LSM11-201ENST00000286307 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
LSM11-201ENST00000286307 PLIN1O60240 522 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 APAF1O14727 1248 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
LSM11-201ENST00000286307 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 WASHC2AQ641Q2 1341 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 CREBRFQ8IUR6 639 aa23.86■■□□□ 1.41
LSM11-201ENST00000286307 DHX16O60231 1041 aaKnown RBP23.85■■□□□ 1.41
LSM11-201ENST00000286307 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
LSM11-201ENST00000286307 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
LSM11-201ENST00000286307 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
LSM11-201ENST00000286307 AKAP17AQ02040 695 aaKnown RBP23.84■■□□□ 1.41
LSM11-201ENST00000286307 KIAA2012Q0VF49 1180 aa23.84■■□□□ 1.41
LSM11-201ENST00000286307 ANKRD45Q5TZF3 282 aa23.84■■□□□ 1.41
LSM11-201ENST00000286307 KIF6Q6ZMV9 814 aa23.83■■□□□ 1.41
LSM11-201ENST00000286307 PRDM11Q9NQV5 511 aa23.83■■□□□ 1.41
LSM11-201ENST00000286307 PRM3Q9NNZ6 103 aa23.83■■□□□ 1.4
LSM11-201ENST00000286307 LRRFIP1Q32MZ4 808 aaKnown RBP23.82■■□□□ 1.4
LSM11-201ENST00000286307 IFIT2P09913 472 aaKnown RBP23.82■■□□□ 1.4
LSM11-201ENST00000286307 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
LSM11-201ENST00000286307 FYB1O15117 783 aa23.81■■□□□ 1.4
LSM11-201ENST00000286307 CDK19Q9BWU1 502 aa23.81■■□□□ 1.4
LSM11-201ENST00000286307 G3BP1Q13283 466 aaKnown RBP eCLIP23.81■■□□□ 1.4
LSM11-201ENST00000286307 ZKSCAN2Q63HK3 967 aa23.81■■□□□ 1.4
LSM11-201ENST00000286307 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
LSM11-201ENST00000286307 HMGXB3Q12766 1538 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 E9PSI1 815 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 PLEKHH2Q8IVE3 1493 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 SYNE3Q6ZMZ3 975 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 STAC3Q96MF2 364 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
LSM11-201ENST00000286307 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
LSM11-201ENST00000286307 FOXD4L1Q9NU39 408 aa23.79■■□□□ 1.4
LSM11-201ENST00000286307 PDE4CQ08493 712 aa23.79■■□□□ 1.4
LSM11-201ENST00000286307 CHAF1AQ13111 956 aaPredicted RBP23.78■■□□□ 1.4
LSM11-201ENST00000286307 CCDC34Q96HJ3 373 aa23.78■■□□□ 1.4
LSM11-201ENST00000286307 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
LSM11-201ENST00000286307 C9orf84Q5VXU9 1444 aa23.77■■□□□ 1.4
LSM11-201ENST00000286307 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
LSM11-201ENST00000286307 SLC52A1Q9NWF4 448 aa23.77■■□□□ 1.4
LSM11-201ENST00000286307 CABP4P57796 275 aa23.77■■□□□ 1.4
LSM11-201ENST00000286307 ANO8Q9HCE9 1232 aaPredicted RBP23.77■■□□□ 1.4
LSM11-201ENST00000286307 DIAPH3Q9NSV4 1193 aa23.77■■□□□ 1.4
LSM11-201ENST00000286307 NEUROD6Q96NK8 337 aa23.76■■□□□ 1.39
LSM11-201ENST00000286307 ADAMTS2O95450 1211 aa23.76■■□□□ 1.39
LSM11-201ENST00000286307 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
LSM11-201ENST00000286307 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
LSM11-201ENST00000286307 RUNDC1Q96C34 613 aa23.75■■□□□ 1.39
LSM11-201ENST00000286307 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
LSM11-201ENST00000286307 KIF21BO75037 1637 aa23.73■■□□□ 1.39
LSM11-201ENST00000286307 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
LSM11-201ENST00000286307 GNAI1P63096 354 aa23.72■■□□□ 1.39
LSM11-201ENST00000286307 ZC3H6P61129 1189 aaKnown RBP23.72■■□□□ 1.39
LSM11-201ENST00000286307 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
LSM11-201ENST00000286307 SF3A1Q15459 793 aaKnown RBP23.72■■□□□ 1.39
LSM11-201ENST00000286307 H3BQV1 296 aa23.71■■□□□ 1.39
LSM11-201ENST00000286307 L1TD1Q5T7N2 865 aaKnown RBP23.71■■□□□ 1.39
LSM11-201ENST00000286307 IFFO2Q5TF58 517 aa23.71■■□□□ 1.39
LSM11-201ENST00000286307 FOXD4L5Q5VV16 416 aaPredicted RBP23.71■■□□□ 1.39
LSM11-201ENST00000286307 FOXD4L4Q8WXT5 416 aaPredicted RBP23.71■■□□□ 1.39
LSM11-201ENST00000286307 HECW1Q76N89 1606 aa23.7■■□□□ 1.39
LSM11-201ENST00000286307 SLKQ9H2G2 1235 aaPredicted RBP23.7■■□□□ 1.38
LSM11-201ENST00000286307 GAS2L2Q8NHY3 880 aa23.7■■□□□ 1.38
LSM11-201ENST00000286307 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 FAM184AQ8NB25 1140 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
LSM11-201ENST00000286307 RTEL1-TNFRSF6BF6WH68 1400 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 KIF3AQ9Y496 699 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 COG6Q9Y2V7 657 aa23.69■■□□□ 1.38
LSM11-201ENST00000286307 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms