RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 LAMC1P11047 1609 aa8.59□□□□□ -1.03
CDKAL1-201ENST00000274695 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
CDKAL1-201ENST00000274695 TEX14Q8IWB6 1497 aa8.59□□□□□ -1.03
CDKAL1-201ENST00000274695 KIF14Q15058 1648 aa8.59□□□□□ -1.03
CDKAL1-201ENST00000274695 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
CDKAL1-201ENST00000274695 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 IQGAP2Q13576 1575 aa8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 ITSN2Q9NZM3 1697 aa8.58□□□□□ -1.04
CDKAL1-201ENST00000274695 KDM6BO15054 1643 aa8.57□□□□□ -1.04
CDKAL1-201ENST00000274695 SNRKQ9NRH2 765 aa8.57□□□□□ -1.04
CDKAL1-201ENST00000274695 URB2Q14146 1524 aaKnown RBP8.57□□□□□ -1.04
CDKAL1-201ENST00000274695 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
CDKAL1-201ENST00000274695 NLRP6P59044 892 aa8.57□□□□□ -1.04
CDKAL1-201ENST00000274695 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
CDKAL1-201ENST00000274695 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
CDKAL1-201ENST00000274695 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
CDKAL1-201ENST00000274695 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
CDKAL1-201ENST00000274695 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
CDKAL1-201ENST00000274695 RSPH4AQ5TD94 716 aa8.55□□□□□ -1.04
CDKAL1-201ENST00000274695 CABP2Q9NPB3 220 aa8.55□□□□□ -1.04
CDKAL1-201ENST00000274695 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
CDKAL1-201ENST00000274695 GAPVD1Q14C86 1478 aa8.55□□□□□ -1.04
CDKAL1-201ENST00000274695 CCDC27Q2M243 656 aa8.55□□□□□ -1.04
CDKAL1-201ENST00000274695 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
CDKAL1-201ENST00000274695 PDIA6Q15084 440 aa8.54□□□□□ -1.04
CDKAL1-201ENST00000274695 KDM5CP41229 1560 aa8.54□□□□□ -1.04
CDKAL1-201ENST00000274695 RPRD2Q5VT52 1461 aaKnown RBP8.53□□□□□ -1.04
CDKAL1-201ENST00000274695 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
CDKAL1-201ENST00000274695 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
CDKAL1-201ENST00000274695 BRD1O95696 1058 aa8.53□□□□□ -1.04
CDKAL1-201ENST00000274695 KCNA1Q09470 495 aa8.52□□□□□ -1.05
CDKAL1-201ENST00000274695 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
CDKAL1-201ENST00000274695 TSPYL2Q9H2G4 693 aaPredicted RBP8.52□□□□□ -1.05
CDKAL1-201ENST00000274695 CNTLNQ9NXG0 1405 aa8.52□□□□□ -1.05
CDKAL1-201ENST00000274695 GNPATO15228 680 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 KIAA0556O60303 1618 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 ARHGEF12Q9NZN5 1544 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 FHOD3Q2V2M9 1422 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 INSRP06213 1382 aa8.51□□□□□ -1.05
CDKAL1-201ENST00000274695 RNF123Q5XPI4 1314 aa8.5□□□□□ -1.05
CDKAL1-201ENST00000274695 POLR3EQ9NVU0 708 aa8.5□□□□□ -1.05
CDKAL1-201ENST00000274695 CDC42BPAQ5VT25 1732 aa8.5□□□□□ -1.05
CDKAL1-201ENST00000274695 EPRSP07814 1512 aaKnown RBP8.5□□□□□ -1.05
CDKAL1-201ENST00000274695 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 GLMNQ92990 594 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 KIAA1522Q9P206 1035 aaPredicted RBP8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 SHANK2Q9UPX8 1470 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 CALR3Q96L12 384 aaKnown RBP8.49□□□□□ -1.05
CDKAL1-201ENST00000274695 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 GRXCR2A6NFK2 248 aa8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 SOX12O15370 315 aa8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 RAD54L2Q9Y4B4 1467 aa8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 RAPGEF6Q8TEU7 1601 aa8.48□□□□□ -1.05
CDKAL1-201ENST00000274695 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKAL1-201ENST00000274695 RFX1P22670 979 aa8.47□□□□□ -1.05
CDKAL1-201ENST00000274695 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
CDKAL1-201ENST00000274695 PRR29P0C7W0 189 aa8.46□□□□□ -1.06
CDKAL1-201ENST00000274695 YTHDC1Q96MU7 727 aaKnown RBP8.46□□□□□ -1.06
CDKAL1-201ENST00000274695 ARHGEF5Q12774 1597 aa8.46□□□□□ -1.06
CDKAL1-201ENST00000274695 MAST1Q9Y2H9 1570 aa8.46□□□□□ -1.06
CDKAL1-201ENST00000274695 RNF17Q9BXT8 1623 aaKnown RBP8.45□□□□□ -1.06
CDKAL1-201ENST00000274695 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
CDKAL1-201ENST00000274695 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
CDKAL1-201ENST00000274695 PHOX2BQ99453 314 aa8.45□□□□□ -1.06
CDKAL1-201ENST00000274695 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
CDKAL1-201ENST00000274695 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 PZPP20742 1482 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 ADAMTS19Q8TE59 1207 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 DISP1Q96F81 1524 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 PTPRGP23470 1445 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 ANKRD30BQ9BXX2 1392 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 ARID4BQ4LE39 1312 aaPredicted RBP8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 OSBPP22059 807 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
CDKAL1-201ENST00000274695 HIC1Q14526 733 aa8.43□□□□□ -1.06
CDKAL1-201ENST00000274695 VIRMAQ69YN4 1812 aaKnown RBP8.43□□□□□ -1.06
CDKAL1-201ENST00000274695 UNC13BO14795 1591 aa8.43□□□□□ -1.06
CDKAL1-201ENST00000274695 NEURL4Q96JN8 1562 aa8.43□□□□□ -1.06
CDKAL1-201ENST00000274695 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 TRPM1Q7Z4N2 1603 aa8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 RALGAPBQ86X10 1494 aa8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 DAPK1P53355 1430 aa8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 TBC1D12O60347 775 aa8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms