RNA–Protein interactions for RNA: ENST00000271002.14

ITGB3BP-201, Transcript of integrin subunit beta 3 binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB3BP, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BP-201ENST00000271002 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
ITGB3BP-201ENST00000271002 TATDN2Q93075 761 aa11.23□□□□□ -0.61
ITGB3BP-201ENST00000271002 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
ITGB3BP-201ENST00000271002 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
ITGB3BP-201ENST00000271002 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
ITGB3BP-201ENST00000271002 RGS20O76081 388 aa11.21□□□□□ -0.61
ITGB3BP-201ENST00000271002 PPP4CP60510 307 aa11.21□□□□□ -0.61
ITGB3BP-201ENST00000271002 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
ITGB3BP-201ENST00000271002 KCNC4Q03721 635 aa11.2□□□□□ -0.62
ITGB3BP-201ENST00000271002 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
ITGB3BP-201ENST00000271002 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
ITGB3BP-201ENST00000271002 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
ITGB3BP-201ENST00000271002 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
ITGB3BP-201ENST00000271002 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
ITGB3BP-201ENST00000271002 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
ITGB3BP-201ENST00000271002 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
ITGB3BP-201ENST00000271002 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
ITGB3BP-201ENST00000271002 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
ITGB3BP-201ENST00000271002 CHD1O14646 1710 aa11.15□□□□□ -0.63
ITGB3BP-201ENST00000271002 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
ITGB3BP-201ENST00000271002 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
ITGB3BP-201ENST00000271002 ABCC8Q09428 1581 aa11.13□□□□□ -0.63
ITGB3BP-201ENST00000271002 RNF40O75150 1001 aa11.13□□□□□ -0.63
ITGB3BP-201ENST00000271002 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
ITGB3BP-201ENST00000271002 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
ITGB3BP-201ENST00000271002 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
ITGB3BP-201ENST00000271002 IRX2Q9BZI1 471 aaPredicted RBP11.12□□□□□ -0.63
ITGB3BP-201ENST00000271002 DNMBPQ6XZF7 1577 aa11.1□□□□□ -0.63
ITGB3BP-201ENST00000271002 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
ITGB3BP-201ENST00000271002 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
ITGB3BP-201ENST00000271002 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
ITGB3BP-201ENST00000271002 MTRQ99707 1265 aa11.07□□□□□ -0.64
ITGB3BP-201ENST00000271002 APLP1P51693 650 aa11.06□□□□□ -0.64
ITGB3BP-201ENST00000271002 EYA1Q99502 592 aa11.05□□□□□ -0.64
ITGB3BP-201ENST00000271002 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
ITGB3BP-201ENST00000271002 PTGDRQ13258 359 aa11.04□□□□□ -0.64
ITGB3BP-201ENST00000271002 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
ITGB3BP-201ENST00000271002 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
ITGB3BP-201ENST00000271002 IL21Q9HBE4 155 aa11.03□□□□□ -0.64
ITGB3BP-201ENST00000271002 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
ITGB3BP-201ENST00000271002 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
ITGB3BP-201ENST00000271002 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
ITGB3BP-201ENST00000271002 NUTM2FA1L443 756 aa11.01□□□□□ -0.65
ITGB3BP-201ENST00000271002 SEMA3EO15041 775 aa11.01□□□□□ -0.65
ITGB3BP-201ENST00000271002 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
ITGB3BP-201ENST00000271002 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
ITGB3BP-201ENST00000271002 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
ITGB3BP-201ENST00000271002 FAM161AQ3B820 660 aa10.99□□□□□ -0.65
ITGB3BP-201ENST00000271002 COPS2P61201 443 aa10.98□□□□□ -0.65
ITGB3BP-201ENST00000271002 PPP1R18Q6NYC8 613 aa10.98□□□□□ -0.65
ITGB3BP-201ENST00000271002 NKX2-3Q8TAU0 364 aa10.98□□□□□ -0.65
ITGB3BP-201ENST00000271002 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 TESPA1A2RU30 521 aaPredicted RBP10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 SLC4A3P48751 1232 aa10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
ITGB3BP-201ENST00000271002 ADGRG1Q9Y653 693 aa10.95□□□□□ -0.66
ITGB3BP-201ENST00000271002 DNAJB2P25686 324 aa10.94□□□□□ -0.66
ITGB3BP-201ENST00000271002 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
ITGB3BP-201ENST00000271002 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
ITGB3BP-201ENST00000271002 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
ITGB3BP-201ENST00000271002 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.93□□□□□ -0.66
ITGB3BP-201ENST00000271002 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
ITGB3BP-201ENST00000271002 Q6ZNB5 142 aa10.92□□□□□ -0.66
ITGB3BP-201ENST00000271002 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
ITGB3BP-201ENST00000271002 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
ITGB3BP-201ENST00000271002 FCHSD2O94868 740 aa10.91□□□□□ -0.66
ITGB3BP-201ENST00000271002 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
ITGB3BP-201ENST00000271002 SYNJ2O15056 1496 aa10.91□□□□□ -0.66
ITGB3BP-201ENST00000271002 SOGA1O94964 1423 aa10.91□□□□□ -0.66
ITGB3BP-201ENST00000271002 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
ITGB3BP-201ENST00000271002 GRIN2BQ13224 1484 aa10.9□□□□□ -0.66
ITGB3BP-201ENST00000271002 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
ITGB3BP-201ENST00000271002 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
ITGB3BP-201ENST00000271002 ZPR1O75312 459 aa10.89□□□□□ -0.67
ITGB3BP-201ENST00000271002 FGD5Q6ZNL6 1462 aa10.88□□□□□ -0.67
ITGB3BP-201ENST00000271002 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
ITGB3BP-201ENST00000271002 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
ITGB3BP-201ENST00000271002 GFRA3O60609 400 aa10.87□□□□□ -0.67
ITGB3BP-201ENST00000271002 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
ITGB3BP-201ENST00000271002 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
ITGB3BP-201ENST00000271002 PBRM1Q86U86 1689 aa10.86□□□□□ -0.67
ITGB3BP-201ENST00000271002 GGCXP38435 758 aa10.84□□□□□ -0.67
ITGB3BP-201ENST00000271002 HIC1Q14526 733 aa10.84□□□□□ -0.67
ITGB3BP-201ENST00000271002 V9GY48 417 aaPredicted RBP10.84□□□□□ -0.67
ITGB3BP-201ENST00000271002 CFHP08603 1231 aa10.83□□□□□ -0.68
ITGB3BP-201ENST00000271002 SLC10A3P09131 477 aa10.83□□□□□ -0.68
ITGB3BP-201ENST00000271002 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
ITGB3BP-201ENST00000271002 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
ITGB3BP-201ENST00000271002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
ITGB3BP-201ENST00000271002 FECHP22830 423 aa10.82□□□□□ -0.68
ITGB3BP-201ENST00000271002 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
ITGB3BP-201ENST00000271002 CUX1P39880 1505 aa10.82□□□□□ -0.68
ITGB3BP-201ENST00000271002 ACTN4O43707 911 aaKnown RBP10.81□□□□□ -0.68
ITGB3BP-201ENST00000271002 TLL1O43897 1013 aa10.81□□□□□ -0.68
ITGB3BP-201ENST00000271002 OATP04181 439 aa10.81□□□□□ -0.68
ITGB3BP-201ENST00000271002 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
ITGB3BP-201ENST00000271002 TMUB1Q9BVT8 246 aa10.8□□□□□ -0.68
ITGB3BP-201ENST00000271002 GPR37O15354 613 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms