RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 CCDC39Q9UFE4 941 aa9.71□□□□□ -0.86
CLTC-201ENST00000269122 PANK1Q8TE04 598 aa9.7□□□□□ -0.86
CLTC-201ENST00000269122 L3MBTL2Q969R5 705 aa9.7□□□□□ -0.86
CLTC-201ENST00000269122 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
CLTC-201ENST00000269122 ZBED9Q6R2W3 1325 aa9.7□□□□□ -0.86
CLTC-201ENST00000269122 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
CLTC-201ENST00000269122 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 CEP164Q9UPV0 1460 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 CCDC66A2RUB6 948 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 MARCH6O60337 910 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 FMNL2Q96PY5 1086 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 PANK3Q9H999 370 aa9.69□□□□□ -0.86
CLTC-201ENST00000269122 TPM1P09493 284 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 CEBPZQ03701 1054 aaKnown RBP9.68□□□□□ -0.86
CLTC-201ENST00000269122 GPATCH11Q8N954 259 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 HMMRO75330 724 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 HSP90B2PQ58FF3 399 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 AK7Q96M32 723 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 DIAPH3Q9NSV4 1193 aa9.68□□□□□ -0.86
CLTC-201ENST00000269122 ARGLU1Q9NWB6 273 aaPredicted RBP9.68□□□□□ -0.86
CLTC-201ENST00000269122 TSPYL1Q9H0U9 437 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 AKNAQ7Z591 1439 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 TRIM5Q9C035 493 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 CWC15Q9P013 229 aaKnown RBP9.67□□□□□ -0.86
CLTC-201ENST00000269122 APAF1O14727 1248 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 TNNT1P13805 278 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 FAM193AP78312 1265 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 CAGE1Q8TC20 777 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 RAD21O60216 631 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 NLRP13Q86W25 1043 aa9.67□□□□□ -0.86
CLTC-201ENST00000269122 PRKRIP1Q9H875 184 aaPredicted RBP9.66□□□□□ -0.86
CLTC-201ENST00000269122 SMC2O95347 1197 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
CLTC-201ENST00000269122 LEKR1Q6ZMV7 388 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 RRP9O43818 475 aaKnown RBP9.66□□□□□ -0.86
CLTC-201ENST00000269122 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 GRPEL1Q9HAV7 217 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
CLTC-201ENST00000269122 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
CLTC-201ENST00000269122 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
CLTC-201ENST00000269122 MYBBP1AQ9BQG0 1328 aaKnown RBP9.65□□□□□ -0.86
CLTC-201ENST00000269122 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.86
CLTC-201ENST00000269122 G3V3G9 751 aa9.65□□□□□ -0.86
CLTC-201ENST00000269122 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
CLTC-201ENST00000269122 SMC3Q9UQE7 1217 aa9.65□□□□□ -0.86
CLTC-201ENST00000269122 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.87
CLTC-201ENST00000269122 TSPY26PQ9H489 355 aa9.64□□□□□ -0.87
CLTC-201ENST00000269122 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
CLTC-201ENST00000269122 KIF15Q9NS87 1388 aa9.64□□□□□ -0.87
CLTC-201ENST00000269122 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.871e-7■■■■■ 66.8
CLTC-201ENST00000269122 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
CLTC-201ENST00000269122 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
CLTC-201ENST00000269122 SPAG9O60271 1321 aaKnown RBP9.64□□□□□ -0.87
CLTC-201ENST00000269122 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
CLTC-201ENST00000269122 SRRTQ9BXP5 876 aaKnown RBP9.63□□□□□ -0.87
CLTC-201ENST00000269122 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
CLTC-201ENST00000269122 KIF3AQ9Y496 699 aa9.63□□□□□ -0.87
CLTC-201ENST00000269122 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
CLTC-201ENST00000269122 UBE2Q2Q8WVN8 375 aa9.62□□□□□ -0.87
CLTC-201ENST00000269122 TRIM34Q9BYJ4 488 aa9.62□□□□□ -0.87
CLTC-201ENST00000269122 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
CLTC-201ENST00000269122 IPO7O95373 1038 aaKnown RBP9.62□□□□□ -0.87
CLTC-201ENST00000269122 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
CLTC-201ENST00000269122 FIBPO43427 364 aa9.62□□□□□ -0.87
CLTC-201ENST00000269122 EIF2S2P20042 333 aaKnown RBP9.62□□□□□ -0.87
CLTC-201ENST00000269122 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 TMX1Q9H3N1 280 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 CCDC191Q8NCU4 936 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 NUCB2P80303 420 aa9.61□□□□□ -0.87
CLTC-201ENST00000269122 XPCQ01831 940 aaPredicted RBP9.61□□□□□ -0.87
CLTC-201ENST00000269122 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
CLTC-201ENST00000269122 ESPNB1AK53 854 aa9.6□□□□□ -0.87
CLTC-201ENST00000269122 MTMR7Q9Y216 660 aa9.6□□□□□ -0.87
CLTC-201ENST00000269122 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
CLTC-201ENST00000269122 REC8O95072 547 aa9.6□□□□□ -0.87
CLTC-201ENST00000269122 DHX57Q6P158 1386 aaKnown RBP9.6□□□□□ -0.87
CLTC-201ENST00000269122 KANK1Q14678 1352 aa9.6□□□□□ -0.87
CLTC-201ENST00000269122 NUP155O75694 1391 aa9.59□□□□□ -0.87
CLTC-201ENST00000269122 TICAM2Q86XR7 235 aa9.59□□□□□ -0.87
CLTC-201ENST00000269122 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
CLTC-201ENST00000269122 POLR3GO15318 223 aaPredicted RBP9.59□□□□□ -0.87
CLTC-201ENST00000269122 CT47B1P0C2W7 299 aaPredicted RBP9.59□□□□□ -0.87
CLTC-201ENST00000269122 TRIM29Q14134 588 aa9.59□□□□□ -0.87
CLTC-201ENST00000269122 SAMD1Q6SPF0 538 aaPredicted RBP9.59□□□□□ -0.87
CLTC-201ENST00000269122 ACBD3Q9H3P7 528 aa9.59□□□□□ -0.87
CLTC-201ENST00000269122 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
CLTC-201ENST00000269122 SDF4Q9BRK5 362 aa9.58□□□□□ -0.88
CLTC-201ENST00000269122 NFXL1Q6ZNB6 911 aa9.58□□□□□ -0.88
CLTC-201ENST00000269122 CPLX1O14810 134 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms