RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 FBXO31Q5XUX0 539 aaPredicted RBP15.64■□□□□ 0.09
SH2D4A-201ENST00000265807 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
SH2D4A-201ENST00000265807 NRXN1Q9ULB1 1477 aa15.63■□□□□ 0.09
SH2D4A-201ENST00000265807 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
SH2D4A-201ENST00000265807 MYOM2P54296 1465 aa15.61■□□□□ 0.09
SH2D4A-201ENST00000265807 IDI1Q13907 227 aa15.61■□□□□ 0.09
SH2D4A-201ENST00000265807 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
SH2D4A-201ENST00000265807 ZC3H13Q5T200 1668 aaKnown RBP15.61■□□□□ 0.09
SH2D4A-201ENST00000265807 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
SH2D4A-201ENST00000265807 CLTCQ00610 1675 aaKnown RBP15.59■□□□□ 0.09
SH2D4A-201ENST00000265807 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
SH2D4A-201ENST00000265807 ARHGAP31Q2M1Z3 1444 aa15.58■□□□□ 0.09
SH2D4A-201ENST00000265807 MLECQ14165 292 aa15.58■□□□□ 0.08
SH2D4A-201ENST00000265807 SCAF11Q99590 1463 aaKnown RBP15.57■□□□□ 0.08
SH2D4A-201ENST00000265807 NEXMIFQ5QGS0 1516 aa15.57■□□□□ 0.08
SH2D4A-201ENST00000265807 PIK3C2GO75747 1445 aa15.57■□□□□ 0.08
SH2D4A-201ENST00000265807 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
SH2D4A-201ENST00000265807 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
SH2D4A-201ENST00000265807 REREQ9P2R6 1566 aa15.56■□□□□ 0.08
SH2D4A-201ENST00000265807 MYOM1P52179 1685 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 MRS2Q9HD23 443 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 TMEM131LA2VDJ0 1609 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 ADGRB1O14514 1584 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
SH2D4A-201ENST00000265807 AGLP35573 1532 aa15.54■□□□□ 0.08
SH2D4A-201ENST00000265807 PANK3Q9H999 370 aa15.53■□□□□ 0.08
SH2D4A-201ENST00000265807 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.07
SH2D4A-201ENST00000265807 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
SH2D4A-201ENST00000265807 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
SH2D4A-201ENST00000265807 TMF1P82094 1093 aa15.5■□□□□ 0.07
SH2D4A-201ENST00000265807 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
SH2D4A-201ENST00000265807 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
SH2D4A-201ENST00000265807 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
SH2D4A-201ENST00000265807 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
SH2D4A-201ENST00000265807 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
SH2D4A-201ENST00000265807 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
SH2D4A-201ENST00000265807 PARD3Q8TEW0 1356 aa15.46■□□□□ 0.07
SH2D4A-201ENST00000265807 QRICH2Q9H0J4 1663 aa15.46■□□□□ 0.06
SH2D4A-201ENST00000265807 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
SH2D4A-201ENST00000265807 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
SH2D4A-201ENST00000265807 SPATA31D1Q6ZQQ2 1576 aa15.44■□□□□ 0.06
SH2D4A-201ENST00000265807 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
SH2D4A-201ENST00000265807 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
SH2D4A-201ENST00000265807 KDM5AP29375 1690 aaKnown RBP15.44■□□□□ 0.06
SH2D4A-201ENST00000265807 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
SH2D4A-201ENST00000265807 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
SH2D4A-201ENST00000265807 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
SH2D4A-201ENST00000265807 A2ML1A8K2U0 1454 aa15.41■□□□□ 0.06
SH2D4A-201ENST00000265807 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
SH2D4A-201ENST00000265807 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
SH2D4A-201ENST00000265807 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
SH2D4A-201ENST00000265807 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
SH2D4A-201ENST00000265807 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
SH2D4A-201ENST00000265807 SAFB2Q14151 953 aaKnown RBP eCLIP15.39■□□□□ 0.05
SH2D4A-201ENST00000265807 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
SH2D4A-201ENST00000265807 PTPRMP28827 1452 aa15.39■□□□□ 0.05
SH2D4A-201ENST00000265807 STK26Q9P289 416 aa15.39■□□□□ 0.05
SH2D4A-201ENST00000265807 ZFYVE9O95405 1425 aa15.39■□□□□ 0.05
SH2D4A-201ENST00000265807 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
SH2D4A-201ENST00000265807 SETD1AO15047 1707 aaKnown RBP15.38■□□□□ 0.05
SH2D4A-201ENST00000265807 CEBPAP49715 358 aaPredicted RBP15.38■□□□□ 0.05
SH2D4A-201ENST00000265807 RALBP1Q15311 655 aa15.38■□□□□ 0.05
SH2D4A-201ENST00000265807 TMC1Q8TDI8 760 aa15.38■□□□□ 0.05
SH2D4A-201ENST00000265807 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
SH2D4A-201ENST00000265807 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
SH2D4A-201ENST00000265807 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
SH2D4A-201ENST00000265807 NRXN3Q9Y4C0 1643 aa15.36■□□□□ 0.05
SH2D4A-201ENST00000265807 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
SH2D4A-201ENST00000265807 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
SH2D4A-201ENST00000265807 SLC12A5Q9H2X9 1139 aa15.36■□□□□ 0.05
SH2D4A-201ENST00000265807 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
SH2D4A-201ENST00000265807 ZBED9Q6R2W3 1325 aa15.33■□□□□ 0.05
SH2D4A-201ENST00000265807 FKBP8Q14318 412 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 RIMS2Q9UQ26 1411 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 BCANQ96GW7 911 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
SH2D4A-201ENST00000265807 UBR1Q8IWV7 1749 aa15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 KNSTRNQ9Y448 316 aa15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
SH2D4A-201ENST00000265807 C3P01024 1663 aa15.3■□□□□ 0.04
SH2D4A-201ENST00000265807 PLEKHH1Q9ULM0 1364 aa15.3■□□□□ 0.04
SH2D4A-201ENST00000265807 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
SH2D4A-201ENST00000265807 CDCA8Q53HL2 280 aa15.29■□□□□ 0.04
SH2D4A-201ENST00000265807 WAPLQ7Z5K2 1190 aa15.28■□□□□ 0.04
SH2D4A-201ENST00000265807 METP08581 1390 aa15.28■□□□□ 0.04
SH2D4A-201ENST00000265807 SALL2Q9Y467 1007 aaPredicted RBP15.28■□□□□ 0.04
SH2D4A-201ENST00000265807 MINK1Q8N4C8 1332 aaPredicted RBP15.28■□□□□ 0.04
SH2D4A-201ENST00000265807 TNRQ92752 1358 aa15.27■□□□□ 0.04
SH2D4A-201ENST00000265807 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
SH2D4A-201ENST00000265807 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
SH2D4A-201ENST00000265807 FER1L4A9Z1Z3 1794 aa15.25■□□□□ 0.03
SH2D4A-201ENST00000265807 LTKP29376 864 aa15.25■□□□□ 0.03
SH2D4A-201ENST00000265807 ADAMTS8Q9UP79 889 aa15.24■□□□□ 0.03
SH2D4A-201ENST00000265807 CD163L1Q9NR16 1453 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms