RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PSME1Q06323 249 aa11□□□□□ -0.65
GTF3C3-201ENST00000263956 PZPP20742 1482 aa10.99□□□□□ -0.65
GTF3C3-201ENST00000263956 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
GTF3C3-201ENST00000263956 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
GTF3C3-201ENST00000263956 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
GTF3C3-201ENST00000263956 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 GLI2P10070 1586 aa10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 A0A0G2JS52 829 aa10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 CGNL1Q0VF96 1302 aa10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 RIMS2Q9UQ26 1411 aa10.98□□□□□ -0.65
GTF3C3-201ENST00000263956 AMOTL2Q9Y2J4 779 aa10.97□□□□□ -0.65
GTF3C3-201ENST00000263956 COG3Q96JB2 828 aa10.97□□□□□ -0.65
GTF3C3-201ENST00000263956 MAST1Q9Y2H9 1570 aa10.97□□□□□ -0.65
GTF3C3-201ENST00000263956 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
GTF3C3-201ENST00000263956 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 DIP2BQ9P265 1576 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 CSB-PGBD3P0DP91 1061 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 KIF7Q2M1P5 1343 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 HSPA2P54652 639 aa10.95□□□□□ -0.66
GTF3C3-201ENST00000263956 AMPHP49418 695 aa10.94□□□□□ -0.66
GTF3C3-201ENST00000263956 NPATQ14207 1427 aa10.94□□□□□ -0.66
GTF3C3-201ENST00000263956 CCER2I3L3R5 266 aa10.94□□□□□ -0.66
GTF3C3-201ENST00000263956 CDC42BPBQ9Y5S2 1711 aa10.94□□□□□ -0.66
GTF3C3-201ENST00000263956 MYT1Q01538 1121 aa10.93□□□□□ -0.66
GTF3C3-201ENST00000263956 WAPLQ7Z5K2 1190 aa10.93□□□□□ -0.66
GTF3C3-201ENST00000263956 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
GTF3C3-201ENST00000263956 GCC2Q8IWJ2 1684 aa10.92□□□□□ -0.66
GTF3C3-201ENST00000263956 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
GTF3C3-201ENST00000263956 NLRP13Q86W25 1043 aa10.92□□□□□ -0.66
GTF3C3-201ENST00000263956 KDM5DQ9BY66 1539 aa10.92□□□□□ -0.66
GTF3C3-201ENST00000263956 PLXNC1O60486 1568 aa10.92□□□□□ -0.66
GTF3C3-201ENST00000263956 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 PMFBP1Q8TBY8 1022 aa10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
GTF3C3-201ENST00000263956 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
GTF3C3-201ENST00000263956 TBX22Q9Y458 520 aa10.9□□□□□ -0.66
GTF3C3-201ENST00000263956 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
GTF3C3-201ENST00000263956 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
GTF3C3-201ENST00000263956 SLC12A5Q9H2X9 1139 aa10.89□□□□□ -0.67
GTF3C3-201ENST00000263956 SCAF11Q99590 1463 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-201ENST00000263956 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-201ENST00000263956 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
GTF3C3-201ENST00000263956 CCDC9Q9Y3X0 531 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-201ENST00000263956 NLRP6P59044 892 aa10.88□□□□□ -0.67
GTF3C3-201ENST00000263956 LTV1Q96GA3 475 aaPredicted RBP10.88□□□□□ -0.67
GTF3C3-201ENST00000263956 MYBBP1AQ9BQG0 1328 aaKnown RBP10.88□□□□□ -0.67
GTF3C3-201ENST00000263956 TMEM2Q9UHN6 1383 aa10.88□□□□□ -0.67
GTF3C3-201ENST00000263956 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 PRAG1Q86YV5 1406 aa10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 GGNBP2Q9H3C7 697 aa10.87□□□□□ -0.67
GTF3C3-201ENST00000263956 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
GTF3C3-201ENST00000263956 PRKRIP1Q9H875 184 aaPredicted RBP10.86□□□□□ -0.67
GTF3C3-201ENST00000263956 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
GTF3C3-201ENST00000263956 ABCC3O15438 1527 aa10.86□□□□□ -0.67
GTF3C3-201ENST00000263956 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
GTF3C3-201ENST00000263956 RTF1Q92541 710 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 ARHGAP31Q2M1Z3 1444 aa10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 EVA1CP58658 441 aa10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 ERVK-7P63135 1459 aa10.85□□□□□ -0.67
GTF3C3-201ENST00000263956 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 PIP4K2BP78356 416 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 DIP2CQ9Y2E4 1556 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 LTKP29376 864 aa10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 COL17A1Q9UMD9 1497 aaPredicted RBP10.83□□□□□ -0.68
GTF3C3-201ENST00000263956 MSH6P52701 1360 aa10.82□□□□□ -0.68
GTF3C3-201ENST00000263956 PTPRTO14522 1441 aa10.82□□□□□ -0.68
GTF3C3-201ENST00000263956 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
GTF3C3-201ENST00000263956 KCNA6P17658 529 aa10.82□□□□□ -0.68
GTF3C3-201ENST00000263956 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
GTF3C3-201ENST00000263956 AGLP35573 1532 aa10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 KDM5CP41229 1560 aa10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 INO80Q9ULG1 1556 aaPredicted RBP10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 DIAPH1O60610 1272 aaKnown RBP10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 LRPPRCP42704 1394 aaKnown RBP10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 EFCAB6Q5THR3 1501 aa10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
GTF3C3-201ENST00000263956 PRDM15P57071 1507 aaPredicted RBP10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 C19orf44Q9H6X5 657 aa10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 TRPM2O94759 1503 aa10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 ARHGEF40Q8TER5 1519 aa10.8□□□□□ -0.68
GTF3C3-201ENST00000263956 TET3O43151 1660 aa10.79□□□□□ -0.68
GTF3C3-201ENST00000263956 YTHDC2Q9H6S0 1430 aaKnown RBP10.79□□□□□ -0.68
GTF3C3-201ENST00000263956 FOXO3O43524 673 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms