RNA–Protein interactions for RNA: ENST00000263774.8

NDUFS3-201, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS3, Length 958 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-201ENST00000263774 SLC26A8Q96RN1 970 aa32.19■■■□□ 2.74
NDUFS3-201ENST00000263774 TRPM2O94759 1503 aa32.17■■■□□ 2.74
NDUFS3-201ENST00000263774 PPP1R15AO75807 674 aaPredicted RBP32.17■■■□□ 2.74
NDUFS3-201ENST00000263774 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.17■■■□□ 2.74
NDUFS3-201ENST00000263774 PLEKHG1Q9ULL1 1385 aa32.17■■■□□ 2.74
NDUFS3-201ENST00000263774 LRRC7Q96NW7 1537 aa32.16■■■□□ 2.74
NDUFS3-201ENST00000263774 BCANQ96GW7 911 aa32.16■■■□□ 2.74
NDUFS3-201ENST00000263774 CLTCL1P53675 1640 aa32.15■■■□□ 2.74
NDUFS3-201ENST00000263774 SENP3Q9H4L4 574 aaPredicted RBP32.14■■■□□ 2.74
NDUFS3-201ENST00000263774 NUTM2DQ5VT03 806 aaPredicted RBP32.13■■■□□ 2.73
NDUFS3-201ENST00000263774 SETD5Q9C0A6 1442 aa32.11■■■□□ 2.73
NDUFS3-201ENST00000263774 KCNA6P17658 529 aa32.09■■■□□ 2.73
NDUFS3-201ENST00000263774 KIF1BO60333 1816 aa32.07■■■□□ 2.72
NDUFS3-201ENST00000263774 TOM1O60784 492 aa32.06■■■□□ 2.72
NDUFS3-201ENST00000263774 ZNF326Q5BKZ1 582 aaKnown RBP32.06■■■□□ 2.72
NDUFS3-201ENST00000263774 MPHOSPH9Q99550 1183 aa32.05■■■□□ 2.72
NDUFS3-201ENST00000263774 FOXD1Q16676 465 aa32.04■■■□□ 2.72
NDUFS3-201ENST00000263774 TBX22Q9Y458 520 aa32.04■■■□□ 2.72
NDUFS3-201ENST00000263774 XIRP1Q702N8 1843 aaKnown RBP32.03■■■□□ 2.72
NDUFS3-201ENST00000263774 ADAMTS13Q76LX8 1427 aa32.03■■■□□ 2.72
NDUFS3-201ENST00000263774 NWD1Q149M9 1564 aa32.02■■■□□ 2.72
NDUFS3-201ENST00000263774 ACIN1Q9UKV3 1341 aaKnown RBP32.02■■■□□ 2.72
NDUFS3-201ENST00000263774 ALKQ9UM73 1620 aa32■■■□□ 2.71
NDUFS3-201ENST00000263774 CHD2O14647 1828 aaKnown RBP32■■■□□ 2.71
NDUFS3-201ENST00000263774 RAB3GAP2Q9H2M9 1393 aa31.99■■■□□ 2.71
NDUFS3-201ENST00000263774 PIP4K2BP78356 416 aa31.98■■■□□ 2.71
NDUFS3-201ENST00000263774 DIP2AQ14689 1571 aa31.98■■■□□ 2.71
NDUFS3-201ENST00000263774 NEXMIFQ5QGS0 1516 aa31.97■■■□□ 2.71
NDUFS3-201ENST00000263774 PROSER2Q86WR7 435 aaPredicted RBP31.97■■■□□ 2.71
NDUFS3-201ENST00000263774 SCAF1Q9H7N4 1312 aaKnown RBP31.97■■■□□ 2.71
NDUFS3-201ENST00000263774 NKTRP30414 1462 aaKnown RBP31.97■■■□□ 2.71
NDUFS3-201ENST00000263774 TMEM94Q12767 1356 aa31.96■■■□□ 2.71
NDUFS3-201ENST00000263774 NRXN3Q9Y4C0 1643 aa31.93■■■□□ 2.7
NDUFS3-201ENST00000263774 SETBP1Q9Y6X0 1596 aa31.92■■■□□ 2.7
NDUFS3-201ENST00000263774 PIK3R4Q99570 1358 aa31.92■■■□□ 2.7
NDUFS3-201ENST00000263774 RBM33Q96EV2 1170 aaKnown RBP31.91■■■□□ 2.7
NDUFS3-201ENST00000263774 CCDC144AA2RUR9 1427 aa31.89■■■□□ 2.7
NDUFS3-201ENST00000263774 RPGRIP1LQ68CZ1 1315 aa31.87■■■□□ 2.69
NDUFS3-201ENST00000263774 PTPRUQ92729 1446 aa31.83■■■□□ 2.69
NDUFS3-201ENST00000263774 VGFO15240 615 aaPredicted RBP31.83■■■□□ 2.69
NDUFS3-201ENST00000263774 HSPA1LP34931 641 aa31.83■■■□□ 2.69
NDUFS3-201ENST00000263774 PPLO60437 1756 aa31.83■■■□□ 2.69
NDUFS3-201ENST00000263774 AMOTL2Q9Y2J4 779 aa31.82■■■□□ 2.68
NDUFS3-201ENST00000263774 HRCP23327 699 aa31.81■■■□□ 2.68
NDUFS3-201ENST00000263774 SPATA31E1Q6ZUB1 1445 aa31.8■■■□□ 2.68
NDUFS3-201ENST00000263774 METP08581 1390 aa31.8■■■□□ 2.68
NDUFS3-201ENST00000263774 MSH6P52701 1360 aa31.78■■■□□ 2.68
NDUFS3-201ENST00000263774 RGL3Q3MIN7 710 aa31.77■■■□□ 2.68
NDUFS3-201ENST00000263774 NCOA3Q9Y6Q9 1424 aa31.76■■■□□ 2.68
NDUFS3-201ENST00000263774 XRN1Q8IZH2 1706 aaKnown RBP31.76■■■□□ 2.67
NDUFS3-201ENST00000263774 SETD1AO15047 1707 aaKnown RBP31.72■■■□□ 2.67
NDUFS3-201ENST00000263774 IFT172Q9UG01 1749 aa31.7■■■□□ 2.67
NDUFS3-201ENST00000263774 FAM135BQ49AJ0 1406 aa31.7■■■□□ 2.67
NDUFS3-201ENST00000263774 C14orf37Q86TY3 774 aa31.7■■■□□ 2.67
NDUFS3-201ENST00000263774 ADGRF5Q8IZF2 1346 aa31.68■■■□□ 2.66
NDUFS3-201ENST00000263774 ANKRD30BQ9BXX2 1392 aa31.68■■■□□ 2.66
NDUFS3-201ENST00000263774 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.66■■■□□ 2.66
NDUFS3-201ENST00000263774 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
NDUFS3-201ENST00000263774 SLAIN2Q9P270 581 aa31.65■■■□□ 2.66
NDUFS3-201ENST00000263774 ROBO1Q9Y6N7 1651 aa31.64■■■□□ 2.65
NDUFS3-201ENST00000263774 DISP3Q9P2K9 1392 aa31.6■■■□□ 2.65
NDUFS3-201ENST00000263774 CADPS2Q86UW7 1296 aa31.6■■■□□ 2.65
NDUFS3-201ENST00000263774 ATF3P18847 181 aa31.58■■■□□ 2.65
NDUFS3-201ENST00000263774 PIK3C2GO75747 1445 aa31.55■■■□□ 2.64
NDUFS3-201ENST00000263774 PTCH1Q13635 1447 aa31.55■■■□□ 2.64
NDUFS3-201ENST00000263774 DCCP43146 1447 aa31.54■■■□□ 2.64
NDUFS3-201ENST00000263774 PRAG1Q86YV5 1406 aa31.54■■■□□ 2.64
NDUFS3-201ENST00000263774 ROBO2Q9HCK4 1378 aa31.54■■■□□ 2.64
NDUFS3-201ENST00000263774 ADGRL3Q9HAR2 1447 aa31.52■■■□□ 2.64
NDUFS3-201ENST00000263774 MYOM2P54296 1465 aa31.51■■■□□ 2.63
NDUFS3-201ENST00000263774 NALCNQ8IZF0 1738 aa31.5■■■□□ 2.63
NDUFS3-201ENST00000263774 NRXN1Q9ULB1 1477 aa31.5■■■□□ 2.63
NDUFS3-201ENST00000263774 ASXL1Q8IXJ9 1541 aa31.48■■■□□ 2.63
NDUFS3-201ENST00000263774 MED1Q15648 1581 aaPredicted RBP31.47■■■□□ 2.63
NDUFS3-201ENST00000263774 TMEM132EQ6IEE7 984 aa31.46■■■□□ 2.63
NDUFS3-201ENST00000263774 C14orf93Q9H972 538 aaKnown RBP31.46■■■□□ 2.63
NDUFS3-201ENST00000263774 LRPPRCP42704 1394 aaKnown RBP31.44■■■□□ 2.62
NDUFS3-201ENST00000263774 MST1RQ04912 1400 aa31.44■■■□□ 2.62
NDUFS3-201ENST00000263774 PHLPP1O60346 1717 aa31.44■■■□□ 2.62
NDUFS3-201ENST00000263774 STK26Q9P289 416 aa31.43■■■□□ 2.62
NDUFS3-201ENST00000263774 TECPR2O15040 1411 aa31.42■■■□□ 2.62
NDUFS3-201ENST00000263774 CFAP70Q5T0N1 1121 aa31.41■■■□□ 2.62
NDUFS3-201ENST00000263774 ABCC11Q96J66 1382 aa31.41■■■□□ 2.62
NDUFS3-201ENST00000263774 LAMC1P11047 1609 aa31.4■■■□□ 2.62
NDUFS3-201ENST00000263774 BRINP3Q76B58 766 aa31.4■■■□□ 2.62
NDUFS3-201ENST00000263774 KNDC1Q76NI1 1749 aa31.39■■■□□ 2.62
NDUFS3-201ENST00000263774 DCAF11Q8TEB1 546 aa31.39■■■□□ 2.62
NDUFS3-201ENST00000263774 YTHDC2Q9H6S0 1430 aaKnown RBP31.39■■■□□ 2.62
NDUFS3-201ENST00000263774 KDM2AQ9Y2K7 1162 aa31.38■■■□□ 2.61
NDUFS3-201ENST00000263774 AHDC1Q5TGY3 1603 aaPredicted RBP31.37■■■□□ 2.61
NDUFS3-201ENST00000263774 COL16A1Q07092 1604 aaPredicted RBP31.36■■■□□ 2.61
NDUFS3-201ENST00000263774 DHX57Q6P158 1386 aaKnown RBP31.36■■■□□ 2.61
NDUFS3-201ENST00000263774 WAPLQ7Z5K2 1190 aa31.35■■■□□ 2.61
NDUFS3-201ENST00000263774 ILDR2Q71H61 639 aa31.34■■■□□ 2.61
NDUFS3-201ENST00000263774 STAC3Q96MF2 364 aa31.34■■■□□ 2.61
NDUFS3-201ENST00000263774 C1orf167Q5SNV9 1468 aa31.32■■■□□ 2.6
NDUFS3-201ENST00000263774 PLEKHH1Q9ULM0 1364 aa31.31■■■□□ 2.6
NDUFS3-201ENST00000263774 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
NDUFS3-201ENST00000263774 JCADQ9P266 1359 aa31.3■■■□□ 2.6
NDUFS3-201ENST00000263774 CDC42BPGQ6DT37 1551 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms