RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 IQGAP1P46940 1657 aa26.86■■□□□ 1.89
SDF4-201ENST00000263741 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
SDF4-201ENST00000263741 ZNF326Q5BKZ1 582 aaKnown RBP26.85■■□□□ 1.89
SDF4-201ENST00000263741 SPATA31E1Q6ZUB1 1445 aa26.85■■□□□ 1.89
SDF4-201ENST00000263741 IFT172Q9UG01 1749 aa26.85■■□□□ 1.89
SDF4-201ENST00000263741 ANKLE2Q86XL3 938 aa26.83■■□□□ 1.89
SDF4-201ENST00000263741 TXNDC2Q86VQ3 553 aa26.82■■□□□ 1.88
SDF4-201ENST00000263741 RGL3Q3MIN7 710 aa26.81■■□□□ 1.88
SDF4-201ENST00000263741 NPHP4O75161 1426 aaPredicted RBP26.79■■□□□ 1.88
SDF4-201ENST00000263741 EID1Q9Y6B2 187 aa26.78■■□□□ 1.88
SDF4-201ENST00000263741 SIN3AQ96ST3 1273 aa26.77■■□□□ 1.88
SDF4-201ENST00000263741 MED14O60244 1454 aa26.77■■□□□ 1.88
SDF4-201ENST00000263741 PPP1R15AO75807 674 aaPredicted RBP26.76■■□□□ 1.87
SDF4-201ENST00000263741 NRXN3Q9Y4C0 1643 aa26.73■■□□□ 1.87
SDF4-201ENST00000263741 NEUROD1Q13562 356 aa26.71■■□□□ 1.87
SDF4-201ENST00000263741 PLEKHG1Q9ULL1 1385 aa26.69■■□□□ 1.86
SDF4-201ENST00000263741 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.69■■□□□ 1.86
SDF4-201ENST00000263741 BCANQ96GW7 911 aa26.69■■□□□ 1.86
SDF4-201ENST00000263741 SLC26A8Q96RN1 970 aa26.66■■□□□ 1.86
SDF4-201ENST00000263741 DMRT2Q9Y5R5 561 aa26.66■■□□□ 1.86
SDF4-201ENST00000263741 HDGFP51858 240 aaKnown RBP26.66■■□□□ 1.86
SDF4-201ENST00000263741 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
SDF4-201ENST00000263741 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
SDF4-201ENST00000263741 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
SDF4-201ENST00000263741 SETD1AO15047 1707 aaKnown RBP26.64■■□□□ 1.86
SDF4-201ENST00000263741 ADGRF5Q8IZF2 1346 aa26.64■■□□□ 1.85
SDF4-201ENST00000263741 ADAMTS13Q76LX8 1427 aa26.63■■□□□ 1.85
SDF4-201ENST00000263741 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
SDF4-201ENST00000263741 MYOM2P54296 1465 aa26.61■■□□□ 1.85
SDF4-201ENST00000263741 ZNF335Q9H4Z2 1342 aaPredicted RBP26.61■■□□□ 1.85
SDF4-201ENST00000263741 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
SDF4-201ENST00000263741 DCAF11Q8TEB1 546 aa26.6■■□□□ 1.85
SDF4-201ENST00000263741 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
SDF4-201ENST00000263741 DIP2AQ14689 1571 aa26.59■■□□□ 1.85
SDF4-201ENST00000263741 ALKQ9UM73 1620 aa26.57■■□□□ 1.84
SDF4-201ENST00000263741 PIK3C2GO75747 1445 aa26.57■■□□□ 1.84
SDF4-201ENST00000263741 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
SDF4-201ENST00000263741 NRXN1Q9ULB1 1477 aa26.56■■□□□ 1.84
SDF4-201ENST00000263741 L3MBTL2Q969R5 705 aa26.54■■□□□ 1.84
SDF4-201ENST00000263741 LTBP4Q8N2S1 1624 aa26.54■■□□□ 1.84
SDF4-201ENST00000263741 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
SDF4-201ENST00000263741 LAMC1P11047 1609 aa26.51■■□□□ 1.83
SDF4-201ENST00000263741 METP08581 1390 aa26.51■■□□□ 1.83
SDF4-201ENST00000263741 NWD1Q149M9 1564 aa26.5■■□□□ 1.83
SDF4-201ENST00000263741 TONSLQ96HA7 1378 aa26.5■■□□□ 1.83
SDF4-201ENST00000263741 TBX22Q9Y458 520 aa26.48■■□□□ 1.83
SDF4-201ENST00000263741 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
SDF4-201ENST00000263741 XRN1Q8IZH2 1706 aaKnown RBP26.47■■□□□ 1.83
SDF4-201ENST00000263741 CLSPNQ9HAW4 1339 aa26.47■■□□□ 1.83
SDF4-201ENST00000263741 XIRP1Q702N8 1843 aaKnown RBP26.45■■□□□ 1.83
SDF4-201ENST00000263741 PRAG1Q86YV5 1406 aa26.45■■□□□ 1.82
SDF4-201ENST00000263741 CFAP70Q5T0N1 1121 aa26.45■■□□□ 1.82
SDF4-201ENST00000263741 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
SDF4-201ENST00000263741 CPS1P31327 1500 aa26.41■■□□□ 1.82
SDF4-201ENST00000263741 TRPM1Q7Z4N2 1603 aa26.41■■□□□ 1.82
SDF4-201ENST00000263741 KIAA1210Q9ULL0 1709 aa26.41■■□□□ 1.82
SDF4-201ENST00000263741 PIK3R4Q99570 1358 aa26.4■■□□□ 1.82
SDF4-201ENST00000263741 KCNA6P17658 529 aa26.4■■□□□ 1.82
SDF4-201ENST00000263741 RBM33Q96EV2 1170 aaKnown RBP26.39■■□□□ 1.82
SDF4-201ENST00000263741 C14orf93Q9H972 538 aaKnown RBP26.39■■□□□ 1.82
SDF4-201ENST00000263741 ADGRB1O14514 1584 aa26.38■■□□□ 1.81
SDF4-201ENST00000263741 NKTRP30414 1462 aaKnown RBP26.38■■□□□ 1.81
SDF4-201ENST00000263741 LRRC7Q96NW7 1537 aa26.38■■□□□ 1.81
SDF4-201ENST00000263741 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
SDF4-201ENST00000263741 KNDC1Q76NI1 1749 aa26.37■■□□□ 1.81
SDF4-201ENST00000263741 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
SDF4-201ENST00000263741 STK26Q9P289 416 aa26.35■■□□□ 1.81
SDF4-201ENST00000263741 NBPF8Q3BBV2 869 aa26.34■■□□□ 1.81
SDF4-201ENST00000263741 YTHDC2Q9H6S0 1430 aaKnown RBP26.33■■□□□ 1.81
SDF4-201ENST00000263741 NBPF1Q3BBV0 1214 aa26.31■■□□□ 1.8
SDF4-201ENST00000263741 TMEM94Q12767 1356 aa26.3■■□□□ 1.8
SDF4-201ENST00000263741 ROBO2Q9HCK4 1378 aa26.3■■□□□ 1.8
SDF4-201ENST00000263741 PROSER2Q86WR7 435 aaPredicted RBP26.3■■□□□ 1.8
SDF4-201ENST00000263741 CERKQ8TCT0 537 aa26.3■■□□□ 1.8
SDF4-201ENST00000263741 NALCNQ8IZF0 1738 aa26.3■■□□□ 1.8
SDF4-201ENST00000263741 ARHGEF28Q8N1W1 1705 aaKnown RBP26.29■■□□□ 1.8
SDF4-201ENST00000263741 LRPPRCP42704 1394 aaKnown RBP26.29■■□□□ 1.8
SDF4-201ENST00000263741 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
SDF4-201ENST00000263741 TECPR2O15040 1411 aa26.25■■□□□ 1.79
SDF4-201ENST00000263741 RALGAPBQ86X10 1494 aa26.23■■□□□ 1.79
SDF4-201ENST00000263741 PLEKHH1Q9ULM0 1364 aa26.23■■□□□ 1.79
SDF4-201ENST00000263741 TRAK1Q9UPV9 953 aa26.23■■□□□ 1.79
SDF4-201ENST00000263741 ROCK2O75116 1388 aaKnown RBP26.23■■□□□ 1.79
SDF4-201ENST00000263741 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
SDF4-201ENST00000263741 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
SDF4-201ENST00000263741 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
SDF4-201ENST00000263741 DLC1Q96QB1 1528 aa26.19■■□□□ 1.78
SDF4-201ENST00000263741 C14orf37Q86TY3 774 aa26.19■■□□□ 1.78
SDF4-201ENST00000263741 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
SDF4-201ENST00000263741 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
SDF4-201ENST00000263741 SAFB2Q14151 953 aaKnown RBP eCLIP26.18■■□□□ 1.78
SDF4-201ENST00000263741 PRAM1Q96QH2 718 aa26.16■■□□□ 1.78
SDF4-201ENST00000263741 ADGRL3Q9HAR2 1447 aa26.15■■□□□ 1.78
SDF4-201ENST00000263741 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
SDF4-201ENST00000263741 FAM135BQ49AJ0 1406 aa26.14■■□□□ 1.78
SDF4-201ENST00000263741 MSH6P52701 1360 aa26.14■■□□□ 1.77
SDF4-201ENST00000263741 GPRASP1Q5JY77 1395 aa26.13■■□□□ 1.77
SDF4-201ENST00000263741 POGKQ9P215 609 aa26.11■■□□□ 1.77
SDF4-201ENST00000263741 NCOA3Q9Y6Q9 1424 aa26.1■■□□□ 1.77
SDF4-201ENST00000263741 CARD11Q9BXL7 1154 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms