RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 FAM13BQ9NYF5 915 aa18.03■□□□□ 0.48
SCARF1-201ENST00000263071 ESPNB1AK53 854 aa18.02■□□□□ 0.48
SCARF1-201ENST00000263071 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCARF1-201ENST00000263071 PLCD3Q8N3E9 789 aa18.01■□□□□ 0.47
SCARF1-201ENST00000263071 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
SCARF1-201ENST00000263071 FAM161AQ3B820 660 aa18■□□□□ 0.47
SCARF1-201ENST00000263071 PRDM10Q9NQV6 1147 aa18■□□□□ 0.47
SCARF1-201ENST00000263071 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
SCARF1-201ENST00000263071 KIAA1211Q6ZU35 1233 aa18■□□□□ 0.47
SCARF1-201ENST00000263071 KIAA0586Q9BVV6 1533 aa17.99■□□□□ 0.47
SCARF1-201ENST00000263071 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-201ENST00000263071 TESK2Q96S53 571 aa17.99■□□□□ 0.47
SCARF1-201ENST00000263071 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
SCARF1-201ENST00000263071 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
SCARF1-201ENST00000263071 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
SCARF1-201ENST00000263071 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
SCARF1-201ENST00000263071 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
SCARF1-201ENST00000263071 DUSP27Q5VZP5 1158 aa17.97■□□□□ 0.47
SCARF1-201ENST00000263071 CENPQQ7L2Z9 268 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-201ENST00000263071 SMAP1Q8IYB5 467 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-201ENST00000263071 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
SCARF1-201ENST00000263071 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
SCARF1-201ENST00000263071 KIF14Q15058 1648 aa17.97■□□□□ 0.47
SCARF1-201ENST00000263071 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
SCARF1-201ENST00000263071 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
SCARF1-201ENST00000263071 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SCARF1-201ENST00000263071 KIAA0556O60303 1618 aa17.95■□□□□ 0.46
SCARF1-201ENST00000263071 IGHDP01880 384 aa17.95■□□□□ 0.46
SCARF1-201ENST00000263071 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
SCARF1-201ENST00000263071 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
SCARF1-201ENST00000263071 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
SCARF1-201ENST00000263071 SEC24BO95487 1268 aa17.94■□□□□ 0.46
SCARF1-201ENST00000263071 RALGAPBQ86X10 1494 aa17.93■□□□□ 0.46
SCARF1-201ENST00000263071 VGLL3A8MV65 326 aa17.92■□□□□ 0.46
SCARF1-201ENST00000263071 ERBINQ96RT1 1412 aa17.92■□□□□ 0.46
SCARF1-201ENST00000263071 CDK11BP21127 795 aaKnown RBP17.92■□□□□ 0.46
SCARF1-201ENST00000263071 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
SCARF1-201ENST00000263071 RAPGEF6Q8TEU7 1601 aa17.91■□□□□ 0.46
SCARF1-201ENST00000263071 KIF3BO15066 747 aa17.91■□□□□ 0.46
SCARF1-201ENST00000263071 PTPRGP23470 1445 aa17.91■□□□□ 0.46
SCARF1-201ENST00000263071 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
SCARF1-201ENST00000263071 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
SCARF1-201ENST00000263071 KDM5CP41229 1560 aa17.9■□□□□ 0.46
SCARF1-201ENST00000263071 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
SCARF1-201ENST00000263071 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
SCARF1-201ENST00000263071 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
SCARF1-201ENST00000263071 PLEKHH2Q8IVE3 1493 aa17.87■□□□□ 0.45
SCARF1-201ENST00000263071 UPF2Q9HAU5 1272 aaKnown RBP17.86■□□□□ 0.45
SCARF1-201ENST00000263071 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
SCARF1-201ENST00000263071 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
SCARF1-201ENST00000263071 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-201ENST00000263071 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
SCARF1-201ENST00000263071 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
SCARF1-201ENST00000263071 MFAP1P55081 439 aaKnown RBP17.85■□□□□ 0.45
SCARF1-201ENST00000263071 MRE11P49959 708 aa17.85■□□□□ 0.45
SCARF1-201ENST00000263071 PPP4R3BQ5MIZ7 849 aa17.85■□□□□ 0.45
SCARF1-201ENST00000263071 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
SCARF1-201ENST00000263071 ATP10BO94823 1461 aa17.84■□□□□ 0.45
SCARF1-201ENST00000263071 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-201ENST00000263071 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCARF1-201ENST00000263071 SLC12A5Q9H2X9 1139 aa17.84■□□□□ 0.45
SCARF1-201ENST00000263071 STK26Q9P289 416 aa17.84■□□□□ 0.45
SCARF1-201ENST00000263071 DHX37Q8IY37 1157 aaKnown RBP17.84■□□□□ 0.45
SCARF1-201ENST00000263071 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
SCARF1-201ENST00000263071 CDCA8Q53HL2 280 aa17.83■□□□□ 0.45
SCARF1-201ENST00000263071 CEP170Q5SW79 1584 aa17.83■□□□□ 0.45
SCARF1-201ENST00000263071 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SCARF1-201ENST00000263071 BECN1Q14457 450 aa17.82■□□□□ 0.44
SCARF1-201ENST00000263071 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
SCARF1-201ENST00000263071 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
SCARF1-201ENST00000263071 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
SCARF1-201ENST00000263071 MTERF4Q7Z6M4 381 aaKnown RBP17.8■□□□□ 0.44
SCARF1-201ENST00000263071 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-201ENST00000263071 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
SCARF1-201ENST00000263071 KDM2BQ8NHM5 1336 aa17.8■□□□□ 0.44
SCARF1-201ENST00000263071 ZNF830Q96NB3 372 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-201ENST00000263071 ARHGAP5Q13017 1502 aa17.79■□□□□ 0.44
SCARF1-201ENST00000263071 E9PSI1 815 aa17.79■□□□□ 0.44
SCARF1-201ENST00000263071 DMTNQ08495 405 aa17.79■□□□□ 0.44
SCARF1-201ENST00000263071 DNTTIP2Q5QJE6 756 aaKnown RBP17.79■□□□□ 0.44
SCARF1-201ENST00000263071 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
SCARF1-201ENST00000263071 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
SCARF1-201ENST00000263071 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-201ENST00000263071 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
SCARF1-201ENST00000263071 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
SCARF1-201ENST00000263071 A2MP01023 1474 aa17.78■□□□□ 0.44
SCARF1-201ENST00000263071 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
SCARF1-201ENST00000263071 RLBP1P12271 317 aa17.77■□□□□ 0.44
SCARF1-201ENST00000263071 TMEM51Q9NW97 253 aa17.77■□□□□ 0.44
SCARF1-201ENST00000263071 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
SCARF1-201ENST00000263071 BRD2P25440 801 aaKnown RBP17.77■□□□□ 0.43
SCARF1-201ENST00000263071 RIPK4P57078 832 aa17.77■□□□□ 0.43
SCARF1-201ENST00000263071 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 CARD14Q9BXL6 1004 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 ELL2O00472 640 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-201ENST00000263071 MTHFSP49914 203 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
SCARF1-201ENST00000263071 GRPEL1Q9HAV7 217 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms