RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 BCAR3O75815 825 aa21.21■□□□□ 0.99
KLF3-201ENST00000261438 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
KLF3-201ENST00000261438 INTS3Q68E01 1043 aaKnown RBP21.2■□□□□ 0.98
KLF3-201ENST00000261438 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
KLF3-201ENST00000261438 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
KLF3-201ENST00000261438 GPS2Q13227 327 aa21.18■□□□□ 0.98
KLF3-201ENST00000261438 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
KLF3-201ENST00000261438 CDC45O75419 566 aa21.18■□□□□ 0.98
KLF3-201ENST00000261438 TSPY26PQ9H489 355 aa21.18■□□□□ 0.98
KLF3-201ENST00000261438 STK31Q9BXU1 1019 aa21.18■□□□□ 0.98
KLF3-201ENST00000261438 CIZ1Q9ULV3 898 aaPredicted RBP21.17■□□□□ 0.98
KLF3-201ENST00000261438 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
KLF3-201ENST00000261438 TPM3P06753 285 aa21.17■□□□□ 0.98
KLF3-201ENST00000261438 STK26Q9P289 416 aa21.17■□□□□ 0.98
KLF3-201ENST00000261438 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
KLF3-201ENST00000261438 CLCN1P35523 988 aa21.16■□□□□ 0.98
KLF3-201ENST00000261438 CCAR2Q8N163 923 aaKnown RBP21.16■□□□□ 0.98
KLF3-201ENST00000261438 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
KLF3-201ENST00000261438 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
KLF3-201ENST00000261438 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
KLF3-201ENST00000261438 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.98
KLF3-201ENST00000261438 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
KLF3-201ENST00000261438 SETQ01105 290 aaPredicted RBP21.13■□□□□ 0.97
KLF3-201ENST00000261438 CUX1P39880 1505 aa21.13■□□□□ 0.97
KLF3-201ENST00000261438 SOX12O15370 315 aa21.13■□□□□ 0.97
KLF3-201ENST00000261438 GPATCH3Q96I76 525 aa21.13■□□□□ 0.97
KLF3-201ENST00000261438 PPP2R1AP30153 589 aa21.12■□□□□ 0.97
KLF3-201ENST00000261438 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
KLF3-201ENST00000261438 PRDM10Q9NQV6 1147 aa21.12■□□□□ 0.97
KLF3-201ENST00000261438 K7ELQ4 463 aaPredicted RBP21.12■□□□□ 0.97
KLF3-201ENST00000261438 TERF2IPQ9NYB0 399 aa21.12■□□□□ 0.97
KLF3-201ENST00000261438 IGF1RP08069 1367 aa21.11■□□□□ 0.97
KLF3-201ENST00000261438 ARGLU1Q9NWB6 273 aaPredicted RBP21.11■□□□□ 0.97
KLF3-201ENST00000261438 RABEP1Q15276 862 aa21.11■□□□□ 0.97
KLF3-201ENST00000261438 HOMER1Q86YM7 354 aa21.11■□□□□ 0.97
KLF3-201ENST00000261438 ANO2Q9NQ90 1003 aa21.11■□□□□ 0.97
KLF3-201ENST00000261438 SF3A1Q15459 793 aaKnown RBP21.1■□□□□ 0.97
KLF3-201ENST00000261438 C20orf194Q5TEA3 1177 aa21.1■□□□□ 0.97
KLF3-201ENST00000261438 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
KLF3-201ENST00000261438 H3BQV1 296 aa21.1■□□□□ 0.97
KLF3-201ENST00000261438 IFFO2Q5TF58 517 aa21.1■□□□□ 0.97
KLF3-201ENST00000261438 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
KLF3-201ENST00000261438 KIF3AQ9Y496 699 aa21.09■□□□□ 0.97
KLF3-201ENST00000261438 MPNDQ8N594 471 aa21.08■□□□□ 0.97
KLF3-201ENST00000261438 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
KLF3-201ENST00000261438 LETM1O95202 739 aaPredicted RBP21.08■□□□□ 0.96
KLF3-201ENST00000261438 NINLQ9Y2I6 1382 aa21.08■□□□□ 0.96
KLF3-201ENST00000261438 TBC1D2Q9BYX2 928 aa21.08■□□□□ 0.96
KLF3-201ENST00000261438 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
KLF3-201ENST00000261438 API5Q9BZZ5 524 aaKnown RBP21.07■□□□□ 0.96
KLF3-201ENST00000261438 SMC3Q9UQE7 1217 aa21.07■□□□□ 0.96
KLF3-201ENST00000261438 SASS6Q6UVJ0 657 aa21.07■□□□□ 0.96
KLF3-201ENST00000261438 TRAK1Q9UPV9 953 aa21.07■□□□□ 0.96
KLF3-201ENST00000261438 SPAG9O60271 1321 aaKnown RBP21.06■□□□□ 0.96
KLF3-201ENST00000261438 NOM1Q5C9Z4 860 aaKnown RBP21.06■□□□□ 0.96
KLF3-201ENST00000261438 BICD2Q8TD16 824 aa21.06■□□□□ 0.96
KLF3-201ENST00000261438 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
KLF3-201ENST00000261438 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.962e-11■□□□□ 9.1
KLF3-201ENST00000261438 CWC22Q9HCG8 908 aaKnown RBP21.06■□□□□ 0.96
KLF3-201ENST00000261438 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
KLF3-201ENST00000261438 RIPK4P57078 832 aa21.05■□□□□ 0.96
KLF3-201ENST00000261438 NOC3LQ8WTT2 800 aaKnown RBP21.05■□□□□ 0.96
KLF3-201ENST00000261438 MNS1Q8NEH6 495 aa21.05■□□□□ 0.96
KLF3-201ENST00000261438 FAM184AQ8NB25 1140 aa21.04■□□□□ 0.96
KLF3-201ENST00000261438 TAF3Q5VWG9 929 aa21.04■□□□□ 0.96
KLF3-201ENST00000261438 TCP11L2Q8N4U5 519 aa21.04■□□□□ 0.96
KLF3-201ENST00000261438 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
KLF3-201ENST00000261438 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
KLF3-201ENST00000261438 PDCL2Q8N4E4 241 aa21.03■□□□□ 0.96
KLF3-201ENST00000261438 CBX1P83916 185 aa21.03■□□□□ 0.96
KLF3-201ENST00000261438 CCDC34Q96HJ3 373 aa21.02■□□□□ 0.96
KLF3-201ENST00000261438 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
KLF3-201ENST00000261438 NEK4P51957 841 aa21.01■□□□□ 0.95
KLF3-201ENST00000261438 TRIM5Q9C035 493 aa21.01■□□□□ 0.95
KLF3-201ENST00000261438 CWC15Q9P013 229 aaKnown RBP21.01■□□□□ 0.95
KLF3-201ENST00000261438 ZNF644Q9H582 1327 aaPredicted RBP21.01■□□□□ 0.95
KLF3-201ENST00000261438 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
KLF3-201ENST00000261438 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
KLF3-201ENST00000261438 PANK2Q9BZ23 570 aa20.99■□□□□ 0.95
KLF3-201ENST00000261438 CARMIL2Q6F5E8 1435 aa20.99■□□□□ 0.95
KLF3-201ENST00000261438 MCM2P49736 904 aa20.99■□□□□ 0.95
KLF3-201ENST00000261438 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
KLF3-201ENST00000261438 ZKSCAN1P17029 563 aaPredicted RBP20.99■□□□□ 0.95
KLF3-201ENST00000261438 FYCO1Q9BQS8 1478 aa20.99■□□□□ 0.95
KLF3-201ENST00000261438 CCDC112Q8NEF3 446 aa20.98■□□□□ 0.95
KLF3-201ENST00000261438 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
KLF3-201ENST00000261438 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
KLF3-201ENST00000261438 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
KLF3-201ENST00000261438 MVPQ14764 893 aaKnown RBP20.97■□□□□ 0.95
KLF3-201ENST00000261438 GCC1Q96CN9 775 aa20.97■□□□□ 0.95
KLF3-201ENST00000261438 RUFY2Q8WXA3 655 aa20.97■□□□□ 0.95
KLF3-201ENST00000261438 TNPO1Q92973 898 aaKnown RBP20.97■□□□□ 0.95
KLF3-201ENST00000261438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.96■□□□□ 0.95
KLF3-201ENST00000261438 NCOA1Q15788 1441 aa20.96■□□□□ 0.95
KLF3-201ENST00000261438 GGT6Q6P531 493 aa20.96■□□□□ 0.95
KLF3-201ENST00000261438 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
KLF3-201ENST00000261438 CHMP4AQ9BY43 222 aa20.95■□□□□ 0.95
KLF3-201ENST00000261438 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
KLF3-201ENST00000261438 SYCE3A1L190 88 aa20.95■□□□□ 0.94
KLF3-201ENST00000261438 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms