RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
MRPL47-201ENST00000259038 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
MRPL47-201ENST00000259038 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
MRPL47-201ENST00000259038 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
MRPL47-201ENST00000259038 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
MRPL47-201ENST00000259038 FCHSD2O94868 740 aa13.33□□□□□ -0.28
MRPL47-201ENST00000259038 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
MRPL47-201ENST00000259038 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
MRPL47-201ENST00000259038 PTGDRQ13258 359 aa13.32□□□□□ -0.28
MRPL47-201ENST00000259038 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
MRPL47-201ENST00000259038 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
MRPL47-201ENST00000259038 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
MRPL47-201ENST00000259038 KCTD12Q96CX2 325 aaKnown RBP13.31□□□□□ -0.28
MRPL47-201ENST00000259038 ANKK1Q8NFD2 765 aa13.3□□□□□ -0.28
MRPL47-201ENST00000259038 WNT2BQ93097 391 aa13.3□□□□□ -0.28
MRPL47-201ENST00000259038 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
MRPL47-201ENST00000259038 SOGA1O94964 1423 aa13.29□□□□□ -0.28
MRPL47-201ENST00000259038 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
MRPL47-201ENST00000259038 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
MRPL47-201ENST00000259038 TATDN2Q93075 761 aa13.28□□□□□ -0.28
MRPL47-201ENST00000259038 HIC1Q14526 733 aa13.27□□□□□ -0.29
MRPL47-201ENST00000259038 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
MRPL47-201ENST00000259038 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
MRPL47-201ENST00000259038 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
MRPL47-201ENST00000259038 SEPT9Q9UHD8 586 aaPredicted RBP13.26□□□□□ -0.29
MRPL47-201ENST00000259038 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
MRPL47-201ENST00000259038 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
MRPL47-201ENST00000259038 THSD4Q6ZMP0 1018 aa13.24□□□□□ -0.29
MRPL47-201ENST00000259038 FAM198AQ9UFP1 575 aa13.24□□□□□ -0.29
MRPL47-201ENST00000259038 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
MRPL47-201ENST00000259038 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
MRPL47-201ENST00000259038 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
MRPL47-201ENST00000259038 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
MRPL47-201ENST00000259038 CUX1P39880 1505 aa13.22□□□□□ -0.29
MRPL47-201ENST00000259038 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.3
MRPL47-201ENST00000259038 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
MRPL47-201ENST00000259038 GNPATO15228 680 aa13.2□□□□□ -0.3
MRPL47-201ENST00000259038 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
MRPL47-201ENST00000259038 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
MRPL47-201ENST00000259038 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
MRPL47-201ENST00000259038 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.19□□□□□ -0.3
MRPL47-201ENST00000259038 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
MRPL47-201ENST00000259038 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
MRPL47-201ENST00000259038 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
MRPL47-201ENST00000259038 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 SMAPO00193 183 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 OATP04181 439 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 PTPN5P54829 565 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 NYAP1Q6ZVC0 841 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 PBRM1Q86U86 1689 aa13.17□□□□□ -0.3
MRPL47-201ENST00000259038 NECTIN2Q92692 538 aa13.16□□□□□ -0.3
MRPL47-201ENST00000259038 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
MRPL47-201ENST00000259038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.14□□□□□ -0.31
MRPL47-201ENST00000259038 EYA1Q99502 592 aa13.14□□□□□ -0.31
MRPL47-201ENST00000259038 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
MRPL47-201ENST00000259038 TSR3Q9UJK0 312 aaKnown RBP13.13□□□□□ -0.31
MRPL47-201ENST00000259038 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
MRPL47-201ENST00000259038 DNAJB2P25686 324 aa13.11□□□□□ -0.31
MRPL47-201ENST00000259038 BCAMP50895 628 aa13.11□□□□□ -0.31
MRPL47-201ENST00000259038 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
MRPL47-201ENST00000259038 GPR37O15354 613 aa13.1□□□□□ -0.31
MRPL47-201ENST00000259038 PPP4CP60510 307 aa13.1□□□□□ -0.31
MRPL47-201ENST00000259038 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
MRPL47-201ENST00000259038 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
MRPL47-201ENST00000259038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
MRPL47-201ENST00000259038 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
MRPL47-201ENST00000259038 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
MRPL47-201ENST00000259038 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
MRPL47-201ENST00000259038 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
MRPL47-201ENST00000259038 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
MRPL47-201ENST00000259038 KIF13AQ9H1H9 1805 aa13.04□□□□□ -0.32
MRPL47-201ENST00000259038 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
MRPL47-201ENST00000259038 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
MRPL47-201ENST00000259038 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
MRPL47-201ENST00000259038 WBP1LQ9NX94 342 aa13.04□□□□□ -0.32
MRPL47-201ENST00000259038 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
MRPL47-201ENST00000259038 METTL3Q86U44 580 aaKnown RBP13.03□□□□□ -0.32
MRPL47-201ENST00000259038 BCANQ96GW7 911 aa13.03□□□□□ -0.32
MRPL47-201ENST00000259038 FECHP22830 423 aa13.02□□□□□ -0.33
MRPL47-201ENST00000259038 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
MRPL47-201ENST00000259038 RNF40O75150 1001 aa13.01□□□□□ -0.33
MRPL47-201ENST00000259038 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
MRPL47-201ENST00000259038 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
MRPL47-201ENST00000259038 NUP160Q12769 1436 aa13.01□□□□□ -0.33
MRPL47-201ENST00000259038 SHROOM2Q13796 1616 aa13□□□□□ -0.33
MRPL47-201ENST00000259038 ADAMTS12P58397 1594 aa13□□□□□ -0.33
MRPL47-201ENST00000259038 FAM161AQ3B820 660 aa13□□□□□ -0.33
MRPL47-201ENST00000259038 PRR14Q9BWN1 585 aa13□□□□□ -0.33
MRPL47-201ENST00000259038 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
MRPL47-201ENST00000259038 IRF6O14896 467 aa12.96□□□□□ -0.33
MRPL47-201ENST00000259038 IFFO2Q5TF58 517 aa12.95□□□□□ -0.34
MRPL47-201ENST00000259038 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
MRPL47-201ENST00000259038 KRI1Q8N9T8 703 aaKnown RBP12.93□□□□□ -0.34
MRPL47-201ENST00000259038 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
MRPL47-201ENST00000259038 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
MRPL47-201ENST00000259038 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
MRPL47-201ENST00000259038 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
MRPL47-201ENST00000259038 KMT5BQ4FZB7 885 aa12.91□□□□□ -0.34
MRPL47-201ENST00000259038 BARGINQ6ZT62 677 aa12.91□□□□□ -0.34
MRPL47-201ENST00000259038 SULF1Q8IWU6 871 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms