RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
RFX1-201ENST00000254325 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
RFX1-201ENST00000254325 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
RFX1-201ENST00000254325 UNC13BO14795 1591 aa20.61■□□□□ 0.89
RFX1-201ENST00000254325 NEFMP07197 916 aa20.61■□□□□ 0.89
RFX1-201ENST00000254325 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
RFX1-201ENST00000254325 IQGAP3Q86VI3 1631 aa20.6■□□□□ 0.89
RFX1-201ENST00000254325 GOLGA2Q08379 1002 aa20.59■□□□□ 0.89
RFX1-201ENST00000254325 COL17A1Q9UMD9 1497 aaPredicted RBP20.59■□□□□ 0.89
RFX1-201ENST00000254325 PARD3Q8TEW0 1356 aa20.58■□□□□ 0.89
RFX1-201ENST00000254325 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
RFX1-201ENST00000254325 PLIN1O60240 522 aa20.57■□□□□ 0.88
RFX1-201ENST00000254325 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
RFX1-201ENST00000254325 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
RFX1-201ENST00000254325 ATP10AO60312 1499 aa20.56■□□□□ 0.88
RFX1-201ENST00000254325 ZFYVE16Q7Z3T8 1539 aa20.56■□□□□ 0.88
RFX1-201ENST00000254325 NOS1P29475 1434 aa20.56■□□□□ 0.88
RFX1-201ENST00000254325 APAF1O14727 1248 aa20.54■□□□□ 0.88
RFX1-201ENST00000254325 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
RFX1-201ENST00000254325 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
RFX1-201ENST00000254325 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
RFX1-201ENST00000254325 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
RFX1-201ENST00000254325 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
RFX1-201ENST00000254325 ARAP3Q8WWN8 1544 aa20.52■□□□□ 0.88
RFX1-201ENST00000254325 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
RFX1-201ENST00000254325 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
RFX1-201ENST00000254325 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
RFX1-201ENST00000254325 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
RFX1-201ENST00000254325 SLC52A1Q9NWF4 448 aa20.49■□□□□ 0.87
RFX1-201ENST00000254325 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
RFX1-201ENST00000254325 TRPM1Q7Z4N2 1603 aa20.48■□□□□ 0.87
RFX1-201ENST00000254325 TRPM2O94759 1503 aa20.48■□□□□ 0.87
RFX1-201ENST00000254325 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
RFX1-201ENST00000254325 IDI1Q13907 227 aa20.47■□□□□ 0.87
RFX1-201ENST00000254325 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
RFX1-201ENST00000254325 FRAT1Q92837 279 aaPredicted RBP20.47■□□□□ 0.87
RFX1-201ENST00000254325 TERF2IPQ9NYB0 399 aa20.47■□□□□ 0.87
RFX1-201ENST00000254325 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
RFX1-201ENST00000254325 C14orf93Q9H972 538 aaKnown RBP20.46■□□□□ 0.87
RFX1-201ENST00000254325 RRP7AQ9Y3A4 280 aaKnown RBP20.46■□□□□ 0.87
RFX1-201ENST00000254325 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
RFX1-201ENST00000254325 PTPRTO14522 1441 aa20.46■□□□□ 0.87
RFX1-201ENST00000254325 POGZQ7Z3K3 1410 aa20.46■□□□□ 0.87
RFX1-201ENST00000254325 CRBNQ96SW2 442 aa20.45■□□□□ 0.86
RFX1-201ENST00000254325 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
RFX1-201ENST00000254325 CFAP65Q6ZU64 1925 aaKnown RBP20.44■□□□□ 0.86
RFX1-201ENST00000254325 POLR1AO95602 1720 aaPredicted RBP20.44■□□□□ 0.86
RFX1-201ENST00000254325 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
RFX1-201ENST00000254325 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
RFX1-201ENST00000254325 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
RFX1-201ENST00000254325 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
RFX1-201ENST00000254325 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
RFX1-201ENST00000254325 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
RFX1-201ENST00000254325 FBXO31Q5XUX0 539 aaPredicted RBP20.4■□□□□ 0.86
RFX1-201ENST00000254325 TET3O43151 1660 aa20.4■□□□□ 0.86
RFX1-201ENST00000254325 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
RFX1-201ENST00000254325 E9PSI1 815 aa20.4■□□□□ 0.86
RFX1-201ENST00000254325 MTHFSP49914 203 aa20.4■□□□□ 0.86
RFX1-201ENST00000254325 E9PCH4 1651 aa20.4■□□□□ 0.86
RFX1-201ENST00000254325 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
RFX1-201ENST00000254325 ASXL1Q8IXJ9 1541 aa20.39■□□□□ 0.85
RFX1-201ENST00000254325 NPATQ14207 1427 aa20.38■□□□□ 0.85
RFX1-201ENST00000254325 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
RFX1-201ENST00000254325 TCERG1O14776 1098 aaKnown RBP20.37■□□□□ 0.85
RFX1-201ENST00000254325 RGS3P49796 1198 aa20.37■□□□□ 0.85
RFX1-201ENST00000254325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
RFX1-201ENST00000254325 GGNBP2Q9H3C7 697 aa20.37■□□□□ 0.85
RFX1-201ENST00000254325 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
RFX1-201ENST00000254325 CARD14Q9BXL6 1004 aa20.34■□□□□ 0.85
RFX1-201ENST00000254325 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
RFX1-201ENST00000254325 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
RFX1-201ENST00000254325 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.85
RFX1-201ENST00000254325 NEO1Q92859 1461 aa20.33■□□□□ 0.85
RFX1-201ENST00000254325 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
RFX1-201ENST00000254325 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
RFX1-201ENST00000254325 INO80Q9ULG1 1556 aaPredicted RBP20.32■□□□□ 0.84
RFX1-201ENST00000254325 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
RFX1-201ENST00000254325 NBR1Q14596 966 aa20.31■□□□□ 0.84
RFX1-201ENST00000254325 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
RFX1-201ENST00000254325 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
RFX1-201ENST00000254325 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
RFX1-201ENST00000254325 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
RFX1-201ENST00000254325 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
RFX1-201ENST00000254325 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
RFX1-201ENST00000254325 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
RFX1-201ENST00000254325 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
RFX1-201ENST00000254325 MYOM2P54296 1465 aa20.28■□□□□ 0.84
RFX1-201ENST00000254325 KIF1BO60333 1816 aa20.28■□□□□ 0.84
RFX1-201ENST00000254325 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
RFX1-201ENST00000254325 CDK19Q9BWU1 502 aa20.27■□□□□ 0.84
RFX1-201ENST00000254325 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
RFX1-201ENST00000254325 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.83
RFX1-201ENST00000254325 RNF123Q5XPI4 1314 aa20.26■□□□□ 0.83
RFX1-201ENST00000254325 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
RFX1-201ENST00000254325 BCL11AQ9H165 835 aa20.26■□□□□ 0.83
RFX1-201ENST00000254325 PIK3C2GO75747 1445 aa20.25■□□□□ 0.83
RFX1-201ENST00000254325 LAMC1P11047 1609 aa20.25■□□□□ 0.83
RFX1-201ENST00000254325 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
RFX1-201ENST00000254325 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
RFX1-201ENST00000254325 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms