RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 POLR1AO95602 1720 aaPredicted RBP33.14■■■□□ 2.9
APOE-201ENST00000252486 SCAF11Q99590 1463 aaKnown RBP33.14■■■□□ 2.9
APOE-201ENST00000252486 TXNDC2Q86VQ3 553 aa33.14■■■□□ 2.9
APOE-201ENST00000252486 CCER1Q8TC90 406 aaPredicted RBP33.13■■■□□ 2.89
APOE-201ENST00000252486 RGL3Q3MIN7 710 aa33.11■■■□□ 2.89
APOE-201ENST00000252486 STRCQ7RTU9 1775 aa33.11■■■□□ 2.89
APOE-201ENST00000252486 NEXMIFQ5QGS0 1516 aa33.1■■■□□ 2.89
APOE-201ENST00000252486 NCKAP5LQ9HCH0 1330 aa33.09■■■□□ 2.89
APOE-201ENST00000252486 MED14O60244 1454 aa33.08■■■□□ 2.89
APOE-201ENST00000252486 PPP1R15AO75807 674 aaPredicted RBP33.08■■■□□ 2.89
APOE-201ENST00000252486 LTKP29376 864 aa33.08■■■□□ 2.89
APOE-201ENST00000252486 SIN3AQ96ST3 1273 aa33.08■■■□□ 2.89
APOE-201ENST00000252486 DMRT2Q9Y5R5 561 aa33.08■■■□□ 2.89
APOE-201ENST00000252486 VGFO15240 615 aaPredicted RBP33.05■■■□□ 2.88
APOE-201ENST00000252486 NEUROD1Q13562 356 aa33.05■■■□□ 2.88
APOE-201ENST00000252486 PPLO60437 1756 aa33.05■■■□□ 2.88
APOE-201ENST00000252486 STAC3Q96MF2 364 aa33.04■■■□□ 2.88
APOE-201ENST00000252486 NPHP4O75161 1426 aaPredicted RBP33.02■■■□□ 2.88
APOE-201ENST00000252486 IFT172Q9UG01 1749 aa33.02■■■□□ 2.88
APOE-201ENST00000252486 PLEKHG1Q9ULL1 1385 aa33.02■■■□□ 2.88
APOE-201ENST00000252486 IQGAP1P46940 1657 aa32.99■■■□□ 2.87
APOE-201ENST00000252486 NUTM2DQ5VT03 806 aaPredicted RBP32.97■■■□□ 2.87
APOE-201ENST00000252486 MYOM2P54296 1465 aa32.97■■■□□ 2.87
APOE-201ENST00000252486 DCAF11Q8TEB1 546 aa32.94■■■□□ 2.86
APOE-201ENST00000252486 BCANQ96GW7 911 aa32.93■■■□□ 2.86
APOE-201ENST00000252486 TONSLQ96HA7 1378 aa32.92■■■□□ 2.86
APOE-201ENST00000252486 SETBP1Q9Y6X0 1596 aa32.92■■■□□ 2.86
APOE-201ENST00000252486 L3MBTL2Q969R5 705 aa32.89■■■□□ 2.86
APOE-201ENST00000252486 DIP2AQ14689 1571 aa32.88■■■□□ 2.85
APOE-201ENST00000252486 ADGRF5Q8IZF2 1346 aa32.88■■■□□ 2.85
APOE-201ENST00000252486 NRXN1Q9ULB1 1477 aa32.87■■■□□ 2.85
APOE-201ENST00000252486 TIMELESSQ9UNS1 1208 aa32.87■■■□□ 2.85
APOE-201ENST00000252486 KDM2AQ9Y2K7 1162 aa32.87■■■□□ 2.85
APOE-201ENST00000252486 TBX22Q9Y458 520 aa32.86■■■□□ 2.85
APOE-201ENST00000252486 PIK3C2GO75747 1445 aa32.84■■■□□ 2.85
APOE-201ENST00000252486 ADAMTS13Q76LX8 1427 aa32.84■■■□□ 2.85
APOE-201ENST00000252486 NRXN3Q9Y4C0 1643 aa32.83■■■□□ 2.85
APOE-201ENST00000252486 SLC26A8Q96RN1 970 aa32.82■■■□□ 2.84
APOE-201ENST00000252486 ALKQ9UM73 1620 aa32.78■■■□□ 2.84
APOE-201ENST00000252486 PIK3R4Q99570 1358 aa32.78■■■□□ 2.84
APOE-201ENST00000252486 LAMC1P11047 1609 aa32.77■■■□□ 2.84
APOE-201ENST00000252486 SENP3Q9H4L4 574 aaPredicted RBP32.77■■■□□ 2.84
APOE-201ENST00000252486 PRAG1Q86YV5 1406 aa32.75■■■□□ 2.83
APOE-201ENST00000252486 C14orf93Q9H972 538 aaKnown RBP32.74■■■□□ 2.83
APOE-201ENST00000252486 SETD1AO15047 1707 aaKnown RBP32.71■■■□□ 2.83
APOE-201ENST00000252486 KIAA1210Q9ULL0 1709 aa32.68■■■□□ 2.82
APOE-201ENST00000252486 CFAP70Q5T0N1 1121 aa32.68■■■□□ 2.82
APOE-201ENST00000252486 KCNA6P17658 529 aa32.67■■■□□ 2.82
APOE-201ENST00000252486 METP08581 1390 aa32.67■■■□□ 2.82
APOE-201ENST00000252486 CHD2O14647 1828 aaKnown RBP32.65■■■□□ 2.82
APOE-201ENST00000252486 ZNF335Q9H4Z2 1342 aaPredicted RBP32.65■■■□□ 2.82
APOE-201ENST00000252486 NWD1Q149M9 1564 aa32.64■■■□□ 2.82
APOE-201ENST00000252486 CPS1P31327 1500 aa32.61■■■□□ 2.81
APOE-201ENST00000252486 NKTRP30414 1462 aaKnown RBP32.59■■■□□ 2.81
APOE-201ENST00000252486 PTPRUQ92729 1446 aa32.59■■■□□ 2.81
APOE-201ENST00000252486 ASXL1Q8IXJ9 1541 aa32.58■■■□□ 2.81
APOE-201ENST00000252486 AMOTL2Q9Y2J4 779 aa32.58■■■□□ 2.81
APOE-201ENST00000252486 TRPM1Q7Z4N2 1603 aa32.58■■■□□ 2.81
APOE-201ENST00000252486 NBPF8Q3BBV2 869 aa32.57■■■□□ 2.8
APOE-201ENST00000252486 ADGRB1O14514 1584 aa32.57■■■□□ 2.8
APOE-201ENST00000252486 XRN1Q8IZH2 1706 aaKnown RBP32.57■■■□□ 2.8
APOE-201ENST00000252486 LRPPRCP42704 1394 aaKnown RBP32.57■■■□□ 2.8
APOE-201ENST00000252486 LTBP4Q8N2S1 1624 aa32.56■■■□□ 2.8
APOE-201ENST00000252486 TMEM132EQ6IEE7 984 aa32.56■■■□□ 2.8
APOE-201ENST00000252486 STRCP1A6NGW2 1772 aa32.55■■■□□ 2.8
APOE-201ENST00000252486 YTHDC2Q9H6S0 1430 aaKnown RBP32.55■■■□□ 2.8
APOE-201ENST00000252486 ABCC11Q96J66 1382 aa32.53■■■□□ 2.8
APOE-201ENST00000252486 RALGAPBQ86X10 1494 aa32.53■■■□□ 2.8
APOE-201ENST00000252486 TECPR2O15040 1411 aa32.51■■■□□ 2.8
APOE-201ENST00000252486 KNDC1Q76NI1 1749 aa32.51■■■□□ 2.79
APOE-201ENST00000252486 PTCH1Q13635 1447 aa32.51■■■□□ 2.79
APOE-201ENST00000252486 ROCK2O75116 1388 aaKnown RBP32.5■■■□□ 2.79
APOE-201ENST00000252486 NBPF1Q3BBV0 1214 aa32.49■■■□□ 2.79
APOE-201ENST00000252486 PROSER2Q86WR7 435 aaPredicted RBP32.48■■■□□ 2.79
APOE-201ENST00000252486 STK26Q9P289 416 aa32.48■■■□□ 2.79
APOE-201ENST00000252486 SIRT1Q96EB6 747 aa32.47■■■□□ 2.79
APOE-201ENST00000252486 GPRASP1Q5JY77 1395 aa32.46■■■□□ 2.79
APOE-201ENST00000252486 LRRC7Q96NW7 1537 aa32.46■■■□□ 2.79
APOE-201ENST00000252486 DLC1Q96QB1 1528 aa32.45■■■□□ 2.78
APOE-201ENST00000252486 NCOA3Q9Y6Q9 1424 aa32.44■■■□□ 2.78
APOE-201ENST00000252486 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
APOE-201ENST00000252486 ROBO2Q9HCK4 1378 aa32.42■■■□□ 2.78
APOE-201ENST00000252486 TRAK1Q9UPV9 953 aa32.41■■■□□ 2.78
APOE-201ENST00000252486 IQSEC2Q5JU85 1478 aa32.41■■■□□ 2.78
APOE-201ENST00000252486 TMEM94Q12767 1356 aa32.4■■■□□ 2.78
APOE-201ENST00000252486 CARD11Q9BXL7 1154 aa32.39■■■□□ 2.78
APOE-201ENST00000252486 CERKQ8TCT0 537 aa32.36■■■□□ 2.77
APOE-201ENST00000252486 ARHGEF28Q8N1W1 1705 aaKnown RBP32.34■■■□□ 2.77
APOE-201ENST00000252486 POGKQ9P215 609 aa32.34■■■□□ 2.77
APOE-201ENST00000252486 EIF3AQ14152 1382 aaKnown RBP32.33■■■□□ 2.77
APOE-201ENST00000252486 ZEB1P37275 1124 aaPredicted RBP32.33■■■□□ 2.77
APOE-201ENST00000252486 XIRP1Q702N8 1843 aaKnown RBP32.33■■■□□ 2.77
APOE-201ENST00000252486 PRAM1Q96QH2 718 aa32.32■■■□□ 2.76
APOE-201ENST00000252486 WAPLQ7Z5K2 1190 aa32.31■■■□□ 2.76
APOE-201ENST00000252486 C14orf37Q86TY3 774 aa32.31■■■□□ 2.76
APOE-201ENST00000252486 MSH6P52701 1360 aa32.3■■■□□ 2.76
APOE-201ENST00000252486 RBM33Q96EV2 1170 aaKnown RBP32.29■■■□□ 2.76
APOE-201ENST00000252486 ADGRL3Q9HAR2 1447 aa32.28■■■□□ 2.76
APOE-201ENST00000252486 C19orf44Q9H6X5 657 aa32.28■■■□□ 2.76
APOE-201ENST00000252486 PLEKHH1Q9ULM0 1364 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms