RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 KANK1Q14678 1352 aa25.11■■□□□ 1.61
SNX4-201ENST00000251775 MROH1Q8NDA8 1641 aa25.11■■□□□ 1.61
SNX4-201ENST00000251775 ANO8Q9HCE9 1232 aaPredicted RBP25.1■■□□□ 1.61
SNX4-201ENST00000251775 PDE4AP27815 886 aa25.09■■□□□ 1.61
SNX4-201ENST00000251775 IL27Q8NEV9 243 aa25.08■■□□□ 1.61
SNX4-201ENST00000251775 STAC3Q96MF2 364 aa25.06■■□□□ 1.6
SNX4-201ENST00000251775 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
SNX4-201ENST00000251775 BACH2Q9BYV9 841 aa25.06■■□□□ 1.6
SNX4-201ENST00000251775 SCAF11Q99590 1463 aaKnown RBP25.05■■□□□ 1.6
SNX4-201ENST00000251775 RCAN3Q9UKA8 241 aa25.05■■□□□ 1.6
SNX4-201ENST00000251775 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
SNX4-201ENST00000251775 USP35Q9P2H5 1018 aa25.04■■□□□ 1.6
SNX4-201ENST00000251775 NEFMP07197 916 aa25.03■■□□□ 1.6
SNX4-201ENST00000251775 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
SNX4-201ENST00000251775 UGGT1Q9NYU2 1555 aa25.03■■□□□ 1.6
SNX4-201ENST00000251775 MS4A1P11836 297 aa25.02■■□□□ 1.6
SNX4-201ENST00000251775 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
SNX4-201ENST00000251775 NEURL4Q96JN8 1562 aa25■■□□□ 1.59
SNX4-201ENST00000251775 KIF1BO60333 1816 aa24.98■■□□□ 1.59
SNX4-201ENST00000251775 EFCAB6Q5THR3 1501 aa24.98■■□□□ 1.59
SNX4-201ENST00000251775 BLMP54132 1417 aaPredicted RBP24.97■■□□□ 1.59
SNX4-201ENST00000251775 PPRC1Q5VV67 1664 aaKnown RBP24.97■■□□□ 1.59
SNX4-201ENST00000251775 MAP3K4Q9Y6R4 1608 aa24.96■■□□□ 1.59
SNX4-201ENST00000251775 SYNMO15061 1565 aa24.96■■□□□ 1.59
SNX4-201ENST00000251775 INSRP06213 1382 aa24.95■■□□□ 1.58
SNX4-201ENST00000251775 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
SNX4-201ENST00000251775 ZNF518AQ6AHZ1 1483 aa24.95■■□□□ 1.58
SNX4-201ENST00000251775 MYOM1P52179 1685 aa24.95■■□□□ 1.58
SNX4-201ENST00000251775 PDE3BQ13370 1112 aa24.94■■□□□ 1.58
SNX4-201ENST00000251775 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
SNX4-201ENST00000251775 IFT172Q9UG01 1749 aa24.94■■□□□ 1.58
SNX4-201ENST00000251775 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
SNX4-201ENST00000251775 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
SNX4-201ENST00000251775 KNSTRNQ9Y448 316 aa24.93■■□□□ 1.58
SNX4-201ENST00000251775 MYOM2P54296 1465 aa24.93■■□□□ 1.58
SNX4-201ENST00000251775 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
SNX4-201ENST00000251775 RTN4Q9NQC3 1192 aaKnown RBP24.93■■□□□ 1.58
SNX4-201ENST00000251775 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
SNX4-201ENST00000251775 ADGRF5Q8IZF2 1346 aa24.92■■□□□ 1.58
SNX4-201ENST00000251775 AMER1Q5JTC6 1135 aaPredicted RBP24.92■■□□□ 1.58
SNX4-201ENST00000251775 CDCA7LQ96GN5 454 aa24.92■■□□□ 1.58
SNX4-201ENST00000251775 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
SNX4-201ENST00000251775 NPM1P06748 294 aaKnown RBP eCLIP24.91■■□□□ 1.58
SNX4-201ENST00000251775 LMTK2Q8IWU2 1503 aa24.9■■□□□ 1.58
SNX4-201ENST00000251775 PPP2R1AP30153 589 aa24.89■■□□□ 1.57
SNX4-201ENST00000251775 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
SNX4-201ENST00000251775 KDM5AP29375 1690 aaKnown RBP24.88■■□□□ 1.57
SNX4-201ENST00000251775 CD109Q6YHK3 1445 aa24.88■■□□□ 1.57
SNX4-201ENST00000251775 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
SNX4-201ENST00000251775 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
SNX4-201ENST00000251775 ADAMTS8Q9UP79 889 aa24.86■■□□□ 1.57
SNX4-201ENST00000251775 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
SNX4-201ENST00000251775 CFAP74Q9C0B2 1584 aa24.86■■□□□ 1.57
SNX4-201ENST00000251775 FRMPD1Q5SYB0 1578 aa24.85■■□□□ 1.57
SNX4-201ENST00000251775 NRXN1Q9ULB1 1477 aa24.84■■□□□ 1.57
SNX4-201ENST00000251775 SKAP1Q86WV1 359 aa24.83■■□□□ 1.57
SNX4-201ENST00000251775 ERVK-7P63135 1459 aa24.83■■□□□ 1.57
SNX4-201ENST00000251775 PLIN1O60240 522 aa24.83■■□□□ 1.57
SNX4-201ENST00000251775 ADGRB3O60242 1522 aa24.82■■□□□ 1.56
SNX4-201ENST00000251775 DDRGK1Q96HY6 314 aa24.82■■□□□ 1.56
SNX4-201ENST00000251775 MLH3Q9UHC1 1453 aa24.82■■□□□ 1.56
SNX4-201ENST00000251775 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
SNX4-201ENST00000251775 NPATQ14207 1427 aa24.8■■□□□ 1.56
SNX4-201ENST00000251775 CRBNQ96SW2 442 aa24.8■■□□□ 1.56
SNX4-201ENST00000251775 NOS1P29475 1434 aa24.8■■□□□ 1.56
SNX4-201ENST00000251775 NPC1L1Q9UHC9 1359 aa24.8■■□□□ 1.56
SNX4-201ENST00000251775 GGT6Q6P531 493 aa24.79■■□□□ 1.56
SNX4-201ENST00000251775 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
SNX4-201ENST00000251775 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
SNX4-201ENST00000251775 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
SNX4-201ENST00000251775 PPLO60437 1756 aa24.77■■□□□ 1.56
SNX4-201ENST00000251775 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SNX4-201ENST00000251775 SLC24A1O60721 1099 aa24.75■■□□□ 1.55
SNX4-201ENST00000251775 GSE1Q14687 1217 aa24.75■■□□□ 1.55
SNX4-201ENST00000251775 SETBP1Q9Y6X0 1596 aa24.74■■□□□ 1.55
SNX4-201ENST00000251775 PLEKHH1Q9ULM0 1364 aa24.74■■□□□ 1.55
SNX4-201ENST00000251775 NFKBIBQ15653 356 aa24.73■■□□□ 1.55
SNX4-201ENST00000251775 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
SNX4-201ENST00000251775 ABCC3O15438 1527 aa24.72■■□□□ 1.55
SNX4-201ENST00000251775 BRPF3Q9ULD4 1205 aa24.72■■□□□ 1.55
SNX4-201ENST00000251775 SBNO2Q9Y2G9 1366 aa24.71■■□□□ 1.55
SNX4-201ENST00000251775 KDM2BQ8NHM5 1336 aa24.7■■□□□ 1.55
SNX4-201ENST00000251775 RAPGEF3O95398 923 aa24.69■■□□□ 1.54
SNX4-201ENST00000251775 SIGLEC1Q9BZZ2 1709 aa24.69■■□□□ 1.54
SNX4-201ENST00000251775 SLC4A3P48751 1232 aa24.69■■□□□ 1.54
SNX4-201ENST00000251775 C20orf194Q5TEA3 1177 aa24.69■■□□□ 1.54
SNX4-201ENST00000251775 CAMSAP1Q5T5Y3 1602 aa24.69■■□□□ 1.54
SNX4-201ENST00000251775 CENPJQ9HC77 1338 aaPredicted RBP24.68■■□□□ 1.54
SNX4-201ENST00000251775 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
SNX4-201ENST00000251775 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.68■■□□□ 1.54
SNX4-201ENST00000251775 ZNF521Q96K83 1311 aa24.67■■□□□ 1.54
SNX4-201ENST00000251775 ZC3H13Q5T200 1668 aaKnown RBP24.67■■□□□ 1.54
SNX4-201ENST00000251775 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
SNX4-201ENST00000251775 TRAK1Q9UPV9 953 aa24.67■■□□□ 1.54
SNX4-201ENST00000251775 NEO1Q92859 1461 aa24.67■■□□□ 1.54
SNX4-201ENST00000251775 QRICH2Q9H0J4 1663 aa24.65■■□□□ 1.54
SNX4-201ENST00000251775 DUSP27Q5VZP5 1158 aa24.64■■□□□ 1.54
SNX4-201ENST00000251775 TMEM132EQ6IEE7 984 aa24.64■■□□□ 1.53
SNX4-201ENST00000251775 FRAT1Q92837 279 aaPredicted RBP24.64■■□□□ 1.53
SNX4-201ENST00000251775 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms