RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 GLI2P10070 1586 aa34.17■■■■□ 3.06
TMEM55B-201ENST00000250489 LRPPRCP42704 1394 aaKnown RBP34.16■■■■□ 3.06
TMEM55B-201ENST00000250489 PANK3Q9H999 370 aa34.15■■■■□ 3.06
TMEM55B-201ENST00000250489 NRXN1Q9ULB1 1477 aa34.14■■■■□ 3.06
TMEM55B-201ENST00000250489 CYB5RLQ6IPT4 315 aa34.14■■■■□ 3.06
TMEM55B-201ENST00000250489 ADGRF5Q8IZF2 1346 aa34.13■■■■□ 3.05
TMEM55B-201ENST00000250489 EIF3AQ14152 1382 aaKnown RBP34.13■■■■□ 3.05
TMEM55B-201ENST00000250489 RIMBP3CA6NJZ7 1639 aa34.11■■■■□ 3.05
TMEM55B-201ENST00000250489 RIMBP3BA6NNM3 1639 aa34.11■■■■□ 3.05
TMEM55B-201ENST00000250489 RIMBP3Q9UFD9 1639 aa34.11■■■■□ 3.05
TMEM55B-201ENST00000250489 NLRP13Q86W25 1043 aa34.11■■■■□ 3.05
TMEM55B-201ENST00000250489 CAMSAP1Q5T5Y3 1602 aa34.11■■■■□ 3.05
TMEM55B-201ENST00000250489 CFAP70Q5T0N1 1121 aa34.09■■■■□ 3.05
TMEM55B-201ENST00000250489 CDCA8Q53HL2 280 aa34.07■■■■□ 3.04
TMEM55B-201ENST00000250489 SYNMO15061 1565 aa34.06■■■■□ 3.04
TMEM55B-201ENST00000250489 SMG6Q86US8 1419 aaKnown RBP34.06■■■■□ 3.04
TMEM55B-201ENST00000250489 NOS1P29475 1434 aa34.04■■■■□ 3.04
TMEM55B-201ENST00000250489 CFAP65Q6ZU64 1925 aaKnown RBP34.04■■■■□ 3.04
TMEM55B-201ENST00000250489 PPLO60437 1756 aa34.03■■■■□ 3.04
TMEM55B-201ENST00000250489 CC2D1BQ5T0F9 858 aaKnown RBP34.02■■■■□ 3.04
TMEM55B-201ENST00000250489 SIGLEC1Q9BZZ2 1709 aa34.02■■■■□ 3.04
TMEM55B-201ENST00000250489 YEATS2Q9ULM3 1422 aa34.01■■■■□ 3.03
TMEM55B-201ENST00000250489 CHGAP10645 457 aaKnown RBP34■■■■□ 3.03
TMEM55B-201ENST00000250489 ZC3H13Q5T200 1668 aaKnown RBP34■■■■□ 3.03
TMEM55B-201ENST00000250489 MYOM1P52179 1685 aa33.99■■■■□ 3.03
TMEM55B-201ENST00000250489 SETBP1Q9Y6X0 1596 aa33.99■■■■□ 3.03
TMEM55B-201ENST00000250489 IRX6P78412 446 aaPredicted RBP33.99■■■■□ 3.03
TMEM55B-201ENST00000250489 ERICH6BQ5W0A0 696 aa33.98■■■■□ 3.03
TMEM55B-201ENST00000250489 DIP2BQ9P265 1576 aa33.97■■■■□ 3.03
TMEM55B-201ENST00000250489 PIK3C2BO00750 1634 aa33.97■■■■□ 3.03
TMEM55B-201ENST00000250489 KDM5AP29375 1690 aaKnown RBP33.97■■■■□ 3.03
TMEM55B-201ENST00000250489 MYO3AQ8NEV4 1616 aa33.96■■■■□ 3.03
TMEM55B-201ENST00000250489 ARHGAP31Q2M1Z3 1444 aa33.96■■■■□ 3.03
TMEM55B-201ENST00000250489 PIK3C2GO75747 1445 aa33.95■■■■□ 3.03
TMEM55B-201ENST00000250489 NUDCQ9Y266 331 aa33.95■■■■□ 3.03
TMEM55B-201ENST00000250489 ZMYM4Q5VZL5 1548 aa33.94■■■■□ 3.02
TMEM55B-201ENST00000250489 SLC24A1O60721 1099 aa33.94■■■■□ 3.02
TMEM55B-201ENST00000250489 RPGRIP1LQ68CZ1 1315 aa33.94■■■■□ 3.02
TMEM55B-201ENST00000250489 TSHZ2Q9NRE2 1034 aa33.93■■■■□ 3.02
TMEM55B-201ENST00000250489 ERVK-7P63135 1459 aa33.92■■■■□ 3.02
TMEM55B-201ENST00000250489 KNSTRNQ9Y448 316 aa33.91■■■■□ 3.02
TMEM55B-201ENST00000250489 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
TMEM55B-201ENST00000250489 SBNO2Q9Y2G9 1366 aa33.88■■■■□ 3.01
TMEM55B-201ENST00000250489 C14orf93Q9H972 538 aaKnown RBP33.87■■■■□ 3.01
TMEM55B-201ENST00000250489 AMER1Q5JTC6 1135 aaPredicted RBP33.87■■■■□ 3.01
TMEM55B-201ENST00000250489 INSRP06213 1382 aa33.86■■■■□ 3.01
TMEM55B-201ENST00000250489 ASXL1Q8IXJ9 1541 aa33.86■■■■□ 3.01
TMEM55B-201ENST00000250489 SENP3-EIF4A1A0A087X0R7 540 aa33.86■■■■□ 3.01
TMEM55B-201ENST00000250489 ADGRB1O14514 1584 aa33.86■■■■□ 3.01
TMEM55B-201ENST00000250489 NEXMIFQ5QGS0 1516 aa33.82■■■■□ 3
TMEM55B-201ENST00000250489 NPC1L1Q9UHC9 1359 aa33.81■■■■□ 3
TMEM55B-201ENST00000250489 BLMP54132 1417 aaPredicted RBP33.8■■■■□ 3
TMEM55B-201ENST00000250489 CENPJQ9HC77 1338 aaPredicted RBP33.79■■■■□ 3
TMEM55B-201ENST00000250489 PPP4R2Q9NY27 417 aa33.79■■■■□ 3
TMEM55B-201ENST00000250489 TSPOAP1O95153 1857 aa33.78■■■■□ 3
TMEM55B-201ENST00000250489 RNF123Q5XPI4 1314 aa33.78■■■■□ 3
TMEM55B-201ENST00000250489 PREX1Q8TCU6 1659 aa33.77■■■■□ 3
TMEM55B-201ENST00000250489 PPP2R1AP30153 589 aa33.76■■■■□ 3
TMEM55B-201ENST00000250489 QRICH2Q9H0J4 1663 aa33.74■■■□□ 2.99
TMEM55B-201ENST00000250489 IDI1Q13907 227 aa33.74■■■□□ 2.99
TMEM55B-201ENST00000250489 SLC52A1Q9NWF4 448 aa33.74■■■□□ 2.99
TMEM55B-201ENST00000250489 TRAK1Q9UPV9 953 aa33.74■■■□□ 2.99
TMEM55B-201ENST00000250489 REREQ9P2R6 1566 aa33.73■■■□□ 2.99
TMEM55B-201ENST00000250489 VGFO15240 615 aaPredicted RBP33.72■■■□□ 2.99
TMEM55B-201ENST00000250489 TMEM132EQ6IEE7 984 aa33.71■■■□□ 2.99
TMEM55B-201ENST00000250489 ZFYVE9O95405 1425 aa33.69■■■□□ 2.98
TMEM55B-201ENST00000250489 PDE3BQ13370 1112 aa33.68■■■□□ 2.98
TMEM55B-201ENST00000250489 AGLP35573 1532 aa33.67■■■□□ 2.98
TMEM55B-201ENST00000250489 TMEM131LA2VDJ0 1609 aa33.67■■■□□ 2.98
TMEM55B-201ENST00000250489 NUTM2DQ5VT03 806 aaPredicted RBP33.66■■■□□ 2.98
TMEM55B-201ENST00000250489 MYO5BQ9ULV0 1848 aa33.65■■■□□ 2.98
TMEM55B-201ENST00000250489 CARD14Q9BXL6 1004 aa33.64■■■□□ 2.98
TMEM55B-201ENST00000250489 SALL2Q9Y467 1007 aaPredicted RBP33.64■■■□□ 2.98
TMEM55B-201ENST00000250489 ARHGEF28Q8N1W1 1705 aaKnown RBP33.63■■■□□ 2.97
TMEM55B-201ENST00000250489 ADAMTS8Q9UP79 889 aa33.6■■■□□ 2.97
TMEM55B-201ENST00000250489 PPP6R1Q9UPN7 881 aa33.57■■■□□ 2.96
TMEM55B-201ENST00000250489 FBXO31Q5XUX0 539 aaPredicted RBP33.56■■■□□ 2.96
TMEM55B-201ENST00000250489 WDR43Q15061 677 aaKnown RBP eCLIP33.56■■■□□ 2.96
TMEM55B-201ENST00000250489 B4GALNT3Q6L9W6 998 aa33.54■■■□□ 2.96
TMEM55B-201ENST00000250489 KIF13AQ9H1H9 1805 aa33.53■■■□□ 2.96
TMEM55B-201ENST00000250489 CLTCQ00610 1675 aaKnown RBP33.52■■■□□ 2.96
TMEM55B-201ENST00000250489 TULP4Q9NRJ4 1543 aa33.52■■■□□ 2.96
TMEM55B-201ENST00000250489 CDCA7LQ96GN5 454 aa33.51■■■□□ 2.95
TMEM55B-201ENST00000250489 PUS7Q96PZ0 661 aaKnown RBP33.51■■■□□ 2.95
TMEM55B-201ENST00000250489 NSD3Q9BZ95 1437 aa33.5■■■□□ 2.95
TMEM55B-201ENST00000250489 RCAN3Q9UKA8 241 aa33.49■■■□□ 2.95
TMEM55B-201ENST00000250489 SLC12A5Q9H2X9 1139 aa33.49■■■□□ 2.95
TMEM55B-201ENST00000250489 ARHGEF40Q8TER5 1519 aa33.48■■■□□ 2.95
TMEM55B-201ENST00000250489 EVC2Q86UK5 1308 aa33.48■■■□□ 2.95
TMEM55B-201ENST00000250489 USP32Q8NFA0 1604 aa33.47■■■□□ 2.95
TMEM55B-201ENST00000250489 RRP1P56182 461 aaKnown RBP33.45■■■□□ 2.95
TMEM55B-201ENST00000250489 SPATA31D1Q6ZQQ2 1576 aa33.45■■■□□ 2.94
TMEM55B-201ENST00000250489 PLEKHH1Q9ULM0 1364 aa33.4■■■□□ 2.94
TMEM55B-201ENST00000250489 RBM19Q9Y4C8 960 aaKnown RBP33.4■■■□□ 2.94
TMEM55B-201ENST00000250489 PTPRMP28827 1452 aa33.4■■■□□ 2.94
TMEM55B-201ENST00000250489 ALKQ9UM73 1620 aa33.38■■■□□ 2.93
TMEM55B-201ENST00000250489 STK26Q9P289 416 aa33.38■■■□□ 2.93
TMEM55B-201ENST00000250489 POLR3AO14802 1390 aaPredicted RBP33.37■■■□□ 2.93
TMEM55B-201ENST00000250489 YTHDC2Q9H6S0 1430 aaKnown RBP33.37■■■□□ 2.93
TMEM55B-201ENST00000250489 STAG3Q9UJ98 1225 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms