RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.08
KNSTRN-201ENST00000249776 E9PCH4 1651 aa21.82■■□□□ 1.08
KNSTRN-201ENST00000249776 NUP155O75694 1391 aa21.82■■□□□ 1.08
KNSTRN-201ENST00000249776 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
KNSTRN-201ENST00000249776 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
KNSTRN-201ENST00000249776 CPS1P31327 1500 aa21.8■■□□□ 1.08
KNSTRN-201ENST00000249776 EID1Q9Y6B2 187 aa21.8■■□□□ 1.08
KNSTRN-201ENST00000249776 NAIPQ13075 1403 aa21.78■■□□□ 1.08
KNSTRN-201ENST00000249776 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
KNSTRN-201ENST00000249776 HFM1A2PYH4 1435 aa21.76■■□□□ 1.07
KNSTRN-201ENST00000249776 LTKP29376 864 aa21.75■■□□□ 1.07
KNSTRN-201ENST00000249776 TMEM131LA2VDJ0 1609 aa21.72■■□□□ 1.07
KNSTRN-201ENST00000249776 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
KNSTRN-201ENST00000249776 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
KNSTRN-201ENST00000249776 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
KNSTRN-201ENST00000249776 STRCP1A6NGW2 1772 aa21.67■■□□□ 1.06
KNSTRN-201ENST00000249776 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
KNSTRN-201ENST00000249776 ZFYVE9O95405 1425 aa21.66■■□□□ 1.06
KNSTRN-201ENST00000249776 UBAP1LF5GYI3 381 aa21.64■■□□□ 1.06
KNSTRN-201ENST00000249776 RIMS2Q9UQ26 1411 aa21.64■■□□□ 1.05
KNSTRN-201ENST00000249776 PPP1R15AO75807 674 aaPredicted RBP21.62■■□□□ 1.05
KNSTRN-201ENST00000249776 CHGAP10645 457 aaKnown RBP21.62■■□□□ 1.05
KNSTRN-201ENST00000249776 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.62■■□□□ 1.05
KNSTRN-201ENST00000249776 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
KNSTRN-201ENST00000249776 TRPM2O94759 1503 aa21.61■■□□□ 1.05
KNSTRN-201ENST00000249776 PLEKHG1Q9ULL1 1385 aa21.61■■□□□ 1.05
KNSTRN-201ENST00000249776 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
KNSTRN-201ENST00000249776 ANP32CO43423 234 aa21.59■■□□□ 1.05
KNSTRN-201ENST00000249776 TOM1O60784 492 aa21.58■■□□□ 1.05
KNSTRN-201ENST00000249776 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
KNSTRN-201ENST00000249776 NEFLP07196 543 aa21.57■■□□□ 1.04
KNSTRN-201ENST00000249776 BCANQ96GW7 911 aa21.56■■□□□ 1.04
KNSTRN-201ENST00000249776 SLC26A8Q96RN1 970 aa21.56■■□□□ 1.04
KNSTRN-201ENST00000249776 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
KNSTRN-201ENST00000249776 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
KNSTRN-201ENST00000249776 KIF1BO60333 1816 aa21.55■■□□□ 1.04
KNSTRN-201ENST00000249776 KCNA6P17658 529 aa21.55■■□□□ 1.04
KNSTRN-201ENST00000249776 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
KNSTRN-201ENST00000249776 DIP2AQ14689 1571 aa21.54■■□□□ 1.04
KNSTRN-201ENST00000249776 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
KNSTRN-201ENST00000249776 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
KNSTRN-201ENST00000249776 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
KNSTRN-201ENST00000249776 XIRP1Q702N8 1843 aaKnown RBP21.52■■□□□ 1.04
KNSTRN-201ENST00000249776 TBX22Q9Y458 520 aa21.51■■□□□ 1.03
KNSTRN-201ENST00000249776 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
KNSTRN-201ENST00000249776 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
KNSTRN-201ENST00000249776 ALKQ9UM73 1620 aa21.48■■□□□ 1.03
KNSTRN-201ENST00000249776 ADAMTS13Q76LX8 1427 aa21.48■■□□□ 1.03
KNSTRN-201ENST00000249776 ZNF326Q5BKZ1 582 aaKnown RBP21.48■■□□□ 1.03
KNSTRN-201ENST00000249776 PIK3R4Q99570 1358 aa21.47■■□□□ 1.03
KNSTRN-201ENST00000249776 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
KNSTRN-201ENST00000249776 TMEM94Q12767 1356 aa21.46■■□□□ 1.03
KNSTRN-201ENST00000249776 PIP4K2BP78356 416 aa21.46■■□□□ 1.03
KNSTRN-201ENST00000249776 SETBP1Q9Y6X0 1596 aa21.46■■□□□ 1.03
KNSTRN-201ENST00000249776 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
KNSTRN-201ENST00000249776 PROSER2Q86WR7 435 aaPredicted RBP21.45■■□□□ 1.02
KNSTRN-201ENST00000249776 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
KNSTRN-201ENST00000249776 NRXN3Q9Y4C0 1643 aa21.43■■□□□ 1.02
KNSTRN-201ENST00000249776 MPHOSPH9Q99550 1183 aa21.43■■□□□ 1.02
KNSTRN-201ENST00000249776 RPGRIP1LQ68CZ1 1315 aa21.39■■□□□ 1.02
KNSTRN-201ENST00000249776 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.02
KNSTRN-201ENST00000249776 NCOA3Q9Y6Q9 1424 aa21.39■■□□□ 1.02
KNSTRN-201ENST00000249776 FKBP8Q14318 412 aa21.39■■□□□ 1.01
KNSTRN-201ENST00000249776 MSH6P52701 1360 aa21.37■■□□□ 1.01
KNSTRN-201ENST00000249776 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
KNSTRN-201ENST00000249776 FOXD1Q16676 465 aa21.37■■□□□ 1.01
KNSTRN-201ENST00000249776 PPLO60437 1756 aa21.36■■□□□ 1.01
KNSTRN-201ENST00000249776 HSPA1LP34931 641 aa21.36■■□□□ 1.01
KNSTRN-201ENST00000249776 ANP32EQ9BTT0 268 aa21.36■■□□□ 1.01
KNSTRN-201ENST00000249776 XRN1Q8IZH2 1706 aaKnown RBP21.35■■□□□ 1.01
KNSTRN-201ENST00000249776 ERICH6BQ5W0A0 696 aa21.33■■□□□ 1.01
KNSTRN-201ENST00000249776 RBM33Q96EV2 1170 aaKnown RBP21.32■■□□□ 1
KNSTRN-201ENST00000249776 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
KNSTRN-201ENST00000249776 FAM135BQ49AJ0 1406 aa21.32■■□□□ 1
KNSTRN-201ENST00000249776 PTPRUQ92729 1446 aa21.32■■□□□ 1
KNSTRN-201ENST00000249776 SPATA31E1Q6ZUB1 1445 aa21.31■■□□□ 1
KNSTRN-201ENST00000249776 METP08581 1390 aa21.29■■□□□ 1
KNSTRN-201ENST00000249776 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
KNSTRN-201ENST00000249776 IFT172Q9UG01 1749 aa21.28■■□□□ 1
KNSTRN-201ENST00000249776 DISP3Q9P2K9 1392 aa21.28■■□□□ 1
KNSTRN-201ENST00000249776 C14orf37Q86TY3 774 aa21.28■■□□□ 1
KNSTRN-201ENST00000249776 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
KNSTRN-201ENST00000249776 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
KNSTRN-201ENST00000249776 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.27■■□□□ 1
KNSTRN-201ENST00000249776 C19orf44Q9H6X5 657 aa21.26■□□□□ 0.99
KNSTRN-201ENST00000249776 CADPS2Q86UW7 1296 aa21.24■□□□□ 0.99
KNSTRN-201ENST00000249776 SLAIN2Q9P270 581 aa21.24■□□□□ 0.99
KNSTRN-201ENST00000249776 DCCP43146 1447 aa21.24■□□□□ 0.99
KNSTRN-201ENST00000249776 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
KNSTRN-201ENST00000249776 RGL3Q3MIN7 710 aa21.23■□□□□ 0.99
KNSTRN-201ENST00000249776 ATF3P18847 181 aa21.22■□□□□ 0.99
KNSTRN-201ENST00000249776 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
KNSTRN-201ENST00000249776 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
KNSTRN-201ENST00000249776 MED1Q15648 1581 aaPredicted RBP21.2■□□□□ 0.98
KNSTRN-201ENST00000249776 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
KNSTRN-201ENST00000249776 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
KNSTRN-201ENST00000249776 PIK3C2GO75747 1445 aa21.17■□□□□ 0.98
KNSTRN-201ENST00000249776 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
KNSTRN-201ENST00000249776 MYOM2P54296 1465 aa21.16■□□□□ 0.98
KNSTRN-201ENST00000249776 PHLPP1O60346 1717 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms