RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
KNSTRN-201ENST00000249776 CCDC180Q9P1Z9 1646 aa31.68■■■□□ 2.66
KNSTRN-201ENST00000249776 ABCC9O60706 1549 aa31.11■■■□□ 2.57
KNSTRN-201ENST00000249776 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
KNSTRN-201ENST00000249776 NACADO15069 1562 aa29.82■■■□□ 2.36
KNSTRN-201ENST00000249776 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
KNSTRN-201ENST00000249776 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
KNSTRN-201ENST00000249776 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
KNSTRN-201ENST00000249776 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
KNSTRN-201ENST00000249776 UNC13AQ9UPW8 1703 aa29.21■■■□□ 2.27
KNSTRN-201ENST00000249776 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
KNSTRN-201ENST00000249776 BICRAQ9NZM4 1560 aa28.95■■■□□ 2.23
KNSTRN-201ENST00000249776 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
KNSTRN-201ENST00000249776 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
KNSTRN-201ENST00000249776 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
KNSTRN-201ENST00000249776 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
KNSTRN-201ENST00000249776 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
KNSTRN-201ENST00000249776 CECR2Q9BXF3 1484 aa28.01■■■□□ 2.07
KNSTRN-201ENST00000249776 SMARCA4P51532 1647 aa27.55■■■□□ 2
KNSTRN-201ENST00000249776 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
KNSTRN-201ENST00000249776 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
KNSTRN-201ENST00000249776 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
KNSTRN-201ENST00000249776 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
KNSTRN-201ENST00000249776 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
KNSTRN-201ENST00000249776 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
KNSTRN-201ENST00000249776 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
KNSTRN-201ENST00000249776 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
KNSTRN-201ENST00000249776 WIZO95785 1651 aa26.96■■□□□ 1.91
KNSTRN-201ENST00000249776 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
KNSTRN-201ENST00000249776 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
KNSTRN-201ENST00000249776 NESP48681 1621 aa26.83■■□□□ 1.89
KNSTRN-201ENST00000249776 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
KNSTRN-201ENST00000249776 CUX2O14529 1486 aa26.72■■□□□ 1.87
KNSTRN-201ENST00000249776 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
KNSTRN-201ENST00000249776 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
KNSTRN-201ENST00000249776 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.85
KNSTRN-201ENST00000249776 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
KNSTRN-201ENST00000249776 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
KNSTRN-201ENST00000249776 CFTRP13569 1480 aa26.45■■□□□ 1.82
KNSTRN-201ENST00000249776 MRC2Q9UBG0 1479 aa26.37■■□□□ 1.81
KNSTRN-201ENST00000249776 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
KNSTRN-201ENST00000249776 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
KNSTRN-201ENST00000249776 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
KNSTRN-201ENST00000249776 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
KNSTRN-201ENST00000249776 WDR62O43379 1518 aa26.3■■□□□ 1.8
KNSTRN-201ENST00000249776 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
KNSTRN-201ENST00000249776 URB2Q14146 1524 aaKnown RBP26.08■■□□□ 1.77
KNSTRN-201ENST00000249776 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
KNSTRN-201ENST00000249776 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
KNSTRN-201ENST00000249776 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
KNSTRN-201ENST00000249776 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
KNSTRN-201ENST00000249776 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
KNSTRN-201ENST00000249776 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
KNSTRN-201ENST00000249776 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
KNSTRN-201ENST00000249776 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
KNSTRN-201ENST00000249776 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
KNSTRN-201ENST00000249776 CUX1P39880 1505 aa25.59■■□□□ 1.69
KNSTRN-201ENST00000249776 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
KNSTRN-201ENST00000249776 SOGA1O94964 1423 aa25.54■■□□□ 1.68
KNSTRN-201ENST00000249776 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
KNSTRN-201ENST00000249776 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
KNSTRN-201ENST00000249776 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
KNSTRN-201ENST00000249776 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.676e-7■■■■□ 20.4
KNSTRN-201ENST00000249776 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
KNSTRN-201ENST00000249776 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.66
KNSTRN-201ENST00000249776 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
KNSTRN-201ENST00000249776 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
KNSTRN-201ENST00000249776 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
KNSTRN-201ENST00000249776 CHD1O14646 1710 aa25.34■■□□□ 1.65
KNSTRN-201ENST00000249776 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
KNSTRN-201ENST00000249776 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
KNSTRN-201ENST00000249776 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
KNSTRN-201ENST00000249776 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
KNSTRN-201ENST00000249776 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
KNSTRN-201ENST00000249776 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
KNSTRN-201ENST00000249776 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
KNSTRN-201ENST00000249776 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
KNSTRN-201ENST00000249776 FBLN2P98095 1184 aa25.21■■□□□ 1.63
KNSTRN-201ENST00000249776 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
KNSTRN-201ENST00000249776 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
KNSTRN-201ENST00000249776 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
KNSTRN-201ENST00000249776 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
KNSTRN-201ENST00000249776 HRCP23327 699 aa25.15■■□□□ 1.62
KNSTRN-201ENST00000249776 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
KNSTRN-201ENST00000249776 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
KNSTRN-201ENST00000249776 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
KNSTRN-201ENST00000249776 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
KNSTRN-201ENST00000249776 ERICH3Q5RHP9 1530 aa25.03■■□□□ 1.6
KNSTRN-201ENST00000249776 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
KNSTRN-201ENST00000249776 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
KNSTRN-201ENST00000249776 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
KNSTRN-201ENST00000249776 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
KNSTRN-201ENST00000249776 NUP160Q12769 1436 aa24.87■■□□□ 1.57
KNSTRN-201ENST00000249776 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
KNSTRN-201ENST00000249776 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
KNSTRN-201ENST00000249776 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
KNSTRN-201ENST00000249776 CUL7Q14999 1698 aa24.78■■□□□ 1.56
KNSTRN-201ENST00000249776 IGF1RP08069 1367 aa24.74■■□□□ 1.55
KNSTRN-201ENST00000249776 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
KNSTRN-201ENST00000249776 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms