RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 PTPRGP23470 1445 aa19.57■□□□□ 0.72
PMPCB-201ENST00000249269 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
PMPCB-201ENST00000249269 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
PMPCB-201ENST00000249269 NBR1Q14596 966 aa19.55■□□□□ 0.72
PMPCB-201ENST00000249269 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
PMPCB-201ENST00000249269 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
PMPCB-201ENST00000249269 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
PMPCB-201ENST00000249269 PPM1GO15355 546 aaPredicted RBP19.53■□□□□ 0.72
PMPCB-201ENST00000249269 C1orf115Q9H7X2 142 aa19.53■□□□□ 0.72
PMPCB-201ENST00000249269 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
PMPCB-201ENST00000249269 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
PMPCB-201ENST00000249269 RAD21O60216 631 aa19.52■□□□□ 0.72
PMPCB-201ENST00000249269 GPATCH11Q8N954 259 aa19.52■□□□□ 0.72
PMPCB-201ENST00000249269 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
PMPCB-201ENST00000249269 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
PMPCB-201ENST00000249269 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
PMPCB-201ENST00000249269 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
PMPCB-201ENST00000249269 PKD2Q13563 968 aa19.5■□□□□ 0.71
PMPCB-201ENST00000249269 PRDM4Q9UKN5 801 aa19.5■□□□□ 0.71
PMPCB-201ENST00000249269 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
PMPCB-201ENST00000249269 MAFGO15525 162 aa19.48■□□□□ 0.71
PMPCB-201ENST00000249269 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
PMPCB-201ENST00000249269 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
PMPCB-201ENST00000249269 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
PMPCB-201ENST00000249269 MTMR7Q9Y216 660 aa19.47■□□□□ 0.71
PMPCB-201ENST00000249269 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
PMPCB-201ENST00000249269 RGS22Q8NE09 1264 aa19.47■□□□□ 0.71
PMPCB-201ENST00000249269 GPRASP1Q5JY77 1395 aa19.47■□□□□ 0.71
PMPCB-201ENST00000249269 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
PMPCB-201ENST00000249269 CDC42BPAQ5VT25 1732 aa19.46■□□□□ 0.71
PMPCB-201ENST00000249269 KCTD17Q8N5Z5 321 aa19.46■□□□□ 0.71
PMPCB-201ENST00000249269 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
PMPCB-201ENST00000249269 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
PMPCB-201ENST00000249269 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
PMPCB-201ENST00000249269 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
PMPCB-201ENST00000249269 CLGNO14967 610 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 RRP9O43818 475 aaKnown RBP19.44■□□□□ 0.7
PMPCB-201ENST00000249269 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
PMPCB-201ENST00000249269 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 TRPM1Q7Z4N2 1603 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 KDM4AO75164 1064 aa19.44■□□□□ 0.7
PMPCB-201ENST00000249269 EIF2AK4Q9P2K8 1649 aaKnown RBP19.43■□□□□ 0.7
PMPCB-201ENST00000249269 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
PMPCB-201ENST00000249269 PLCD3Q8N3E9 789 aa19.43■□□□□ 0.7
PMPCB-201ENST00000249269 NUP155O75694 1391 aa19.41■□□□□ 0.7
PMPCB-201ENST00000249269 PDE4AP27815 886 aa19.41■□□□□ 0.7
PMPCB-201ENST00000249269 NUP160Q12769 1436 aa19.4■□□□□ 0.7
PMPCB-201ENST00000249269 ABCA8O94911 1581 aa19.38■□□□□ 0.69
PMPCB-201ENST00000249269 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
PMPCB-201ENST00000249269 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
PMPCB-201ENST00000249269 COL17A1Q9UMD9 1497 aaPredicted RBP19.38■□□□□ 0.69
PMPCB-201ENST00000249269 PHF14O94880 888 aa19.37■□□□□ 0.69
PMPCB-201ENST00000249269 HSP90AA2PQ14568 343 aaPredicted RBP19.37■□□□□ 0.69
PMPCB-201ENST00000249269 ZNF830Q96NB3 372 aaPredicted RBP19.37■□□□□ 0.69
PMPCB-201ENST00000249269 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
PMPCB-201ENST00000249269 ZNF622Q969S3 477 aaKnown RBP eCLIP19.36■□□□□ 0.694e-7■□□□□ 9.1
PMPCB-201ENST00000249269 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
PMPCB-201ENST00000249269 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
PMPCB-201ENST00000249269 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
PMPCB-201ENST00000249269 UNC13BO14795 1591 aa19.35■□□□□ 0.69
PMPCB-201ENST00000249269 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
PMPCB-201ENST00000249269 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
PMPCB-201ENST00000249269 ATP10AO60312 1499 aa19.34■□□□□ 0.69
PMPCB-201ENST00000249269 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
PMPCB-201ENST00000249269 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
PMPCB-201ENST00000249269 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
PMPCB-201ENST00000249269 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.68
PMPCB-201ENST00000249269 CLASP1Q7Z460 1538 aa19.33■□□□□ 0.68
PMPCB-201ENST00000249269 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
PMPCB-201ENST00000249269 MMP14P50281 582 aa19.31■□□□□ 0.68
PMPCB-201ENST00000249269 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
PMPCB-201ENST00000249269 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
PMPCB-201ENST00000249269 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
PMPCB-201ENST00000249269 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
PMPCB-201ENST00000249269 SOX12O15370 315 aa19.29■□□□□ 0.68
PMPCB-201ENST00000249269 RGS3P49796 1198 aa19.28■□□□□ 0.68
PMPCB-201ENST00000249269 EIF3AQ14152 1382 aaKnown RBP19.27■□□□□ 0.68
PMPCB-201ENST00000249269 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.67
PMPCB-201ENST00000249269 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
PMPCB-201ENST00000249269 HDAC5Q9UQL6 1122 aa19.26■□□□□ 0.67
PMPCB-201ENST00000249269 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
PMPCB-201ENST00000249269 PLXNC1O60486 1568 aa19.26■□□□□ 0.67
PMPCB-201ENST00000249269 CENPQQ7L2Z9 268 aaPredicted RBP19.26■□□□□ 0.67
PMPCB-201ENST00000249269 RNF17Q9BXT8 1623 aaKnown RBP19.25■□□□□ 0.67
PMPCB-201ENST00000249269 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
PMPCB-201ENST00000249269 ATP10BO94823 1461 aa19.25■□□□□ 0.67
PMPCB-201ENST00000249269 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.24■□□□□ 0.67
PMPCB-201ENST00000249269 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
PMPCB-201ENST00000249269 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
PMPCB-201ENST00000249269 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
PMPCB-201ENST00000249269 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
PMPCB-201ENST00000249269 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
PMPCB-201ENST00000249269 TMTC2Q8N394 836 aa19.22■□□□□ 0.67
PMPCB-201ENST00000249269 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
PMPCB-201ENST00000249269 MAGI2Q86UL8 1455 aa19.21■□□□□ 0.67
PMPCB-201ENST00000249269 TMF1P82094 1093 aa19.21■□□□□ 0.67
PMPCB-201ENST00000249269 A2MP01023 1474 aa19.21■□□□□ 0.67
PMPCB-201ENST00000249269 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms