RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 PMFBP1Q8TBY8 1022 aa4.91□□□□□ -1.62
PHTF2-201ENST00000248550 JCADQ9P266 1359 aa4.9□□□□□ -1.62
PHTF2-201ENST00000248550 CCDC141Q6ZP82 1450 aa4.9□□□□□ -1.62
PHTF2-201ENST00000248550 ATP7AQ04656 1500 aa4.9□□□□□ -1.62
PHTF2-201ENST00000248550 KDM5AP29375 1690 aaKnown RBP4.9□□□□□ -1.62
PHTF2-201ENST00000248550 SETD1BQ9UPS6 1966 aaKnown RBP4.9□□□□□ -1.62
PHTF2-201ENST00000248550 DIP2CQ9Y2E4 1556 aa4.9□□□□□ -1.62
PHTF2-201ENST00000248550 CHMP4AQ9BY43 222 aa4.9□□□□□ -1.63
PHTF2-201ENST00000248550 TNRQ92752 1358 aa4.9□□□□□ -1.63
PHTF2-201ENST00000248550 ADAMTS2O95450 1211 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 FLAD1Q8NFF5 587 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 PZPP20742 1482 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 ERBINQ96RT1 1412 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 DIP2AQ14689 1571 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 VGFO15240 615 aaPredicted RBP4.89□□□□□ -1.63
PHTF2-201ENST00000248550 USP21Q9UK80 565 aa4.89□□□□□ -1.63
PHTF2-201ENST00000248550 DHX29Q7Z478 1369 aaKnown RBP4.89□□□□□ -1.63
PHTF2-201ENST00000248550 CDK13Q14004 1512 aaKnown RBP4.89□□□□□ -1.63
PHTF2-201ENST00000248550 SUPT6HQ7KZ85 1726 aaKnown RBP4.89□□□□□ -1.63
PHTF2-201ENST00000248550 CDCA7Q9BWT1 371 aaPredicted RBP4.89□□□□□ -1.63
PHTF2-201ENST00000248550 SLC52A1Q9NWF4 448 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 PIK3R4Q99570 1358 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 ARXQ96QS3 562 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 GPBP1L1Q9HC44 474 aaPredicted RBP4.88□□□□□ -1.63
PHTF2-201ENST00000248550 CWC22Q9HCG8 908 aaKnown RBP4.88□□□□□ -1.63
PHTF2-201ENST00000248550 RNF17Q9BXT8 1623 aaKnown RBP4.88□□□□□ -1.63
PHTF2-201ENST00000248550 DUOX2Q9NRD8 1548 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 MYO3AQ8NEV4 1616 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 INO80Q9ULG1 1556 aaPredicted RBP4.88□□□□□ -1.63
PHTF2-201ENST00000248550 ARHGAP31Q2M1Z3 1444 aa4.88□□□□□ -1.63
PHTF2-201ENST00000248550 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
PHTF2-201ENST00000248550 MED14O60244 1454 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 MYOM3Q5VTT5 1437 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 GTF2E1P29083 439 aaPredicted RBP4.87□□□□□ -1.63
PHTF2-201ENST00000248550 CABP2Q9NPB3 220 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 SAMD9LQ8IVG5 1584 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 NKTRP30414 1462 aaKnown RBP4.87□□□□□ -1.63
PHTF2-201ENST00000248550 NPHP3Q7Z494 1330 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 PLXNC1O60486 1568 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 PPP4R3CPQ6ZMV5 832 aa4.87□□□□□ -1.63
PHTF2-201ENST00000248550 HSPA1LP34931 641 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 DPY19L2Q6NUT2 758 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 SSFA2P28290 1259 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 PRDM11Q9NQV5 511 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 FGD6Q6ZV73 1430 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 TNS4Q8IZW8 715 aa4.86□□□□□ -1.63
PHTF2-201ENST00000248550 TCOF1Q13428 1488 aaKnown RBP4.85□□□□□ -1.63
PHTF2-201ENST00000248550 NCKAP5LQ9HCH0 1330 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 FAM196AQ6ZSG2 479 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 C19orf44Q9H6X5 657 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 COL17A1Q9UMD9 1497 aaPredicted RBP4.85□□□□□ -1.63
PHTF2-201ENST00000248550 NPHP4O75161 1426 aaPredicted RBP4.85□□□□□ -1.63
PHTF2-201ENST00000248550 ANKRD30BQ9BXX2 1392 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 HSP90B1P14625 803 aaKnown RBP4.85□□□□□ -1.63
PHTF2-201ENST00000248550 CDCA8Q53HL2 280 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 ANKRD30AQ9BXX3 1397 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 SETD5Q9C0A6 1442 aa4.85□□□□□ -1.63
PHTF2-201ENST00000248550 CLEC11AQ9Y240 323 aa4.84□□□□□ -1.63
PHTF2-201ENST00000248550 LMTK2Q8IWU2 1503 aa4.84□□□□□ -1.63
PHTF2-201ENST00000248550 CAPN15O75808 1086 aa4.84□□□□□ -1.63
PHTF2-201ENST00000248550 KDM2BQ8NHM5 1336 aa4.84□□□□□ -1.63
PHTF2-201ENST00000248550 ZMYM3Q14202 1370 aa4.84□□□□□ -1.63
PHTF2-201ENST00000248550 LMOD1P29536 600 aaPredicted RBP4.84□□□□□ -1.63
PHTF2-201ENST00000248550 KCNA6P17658 529 aa4.84□□□□□ -1.64
PHTF2-201ENST00000248550 CAMSAP1Q5T5Y3 1602 aa4.84□□□□□ -1.64
PHTF2-201ENST00000248550 ARHGAP35Q9NRY4 1499 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 POLR1AO95602 1720 aaPredicted RBP4.83□□□□□ -1.64
PHTF2-201ENST00000248550 CDK12Q9NYV4 1490 aaPredicted RBP4.83□□□□□ -1.64
PHTF2-201ENST00000248550 ROCK1Q13464 1354 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 ITGAEP38570 1179 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 ESCO1Q5FWF5 840 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 STAC3Q96MF2 364 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 ABCA6Q8N139 1617 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 DCCP43146 1447 aa4.83□□□□□ -1.64
PHTF2-201ENST00000248550 APBA3O96018 575 aa4.82□□□□□ -1.64
PHTF2-201ENST00000248550 C3P01024 1663 aa4.82□□□□□ -1.64
PHTF2-201ENST00000248550 NF2P35240 595 aa4.82□□□□□ -1.64
PHTF2-201ENST00000248550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.82□□□□□ -1.64
PHTF2-201ENST00000248550 KRT27Q7Z3Y8 459 aa4.82□□□□□ -1.64
PHTF2-201ENST00000248550 HDGFL2Q7Z4V5 671 aaPredicted RBP4.82□□□□□ -1.64
PHTF2-201ENST00000248550 GPATCH8Q9UKJ3 1502 aaKnown RBP4.82□□□□□ -1.64
PHTF2-201ENST00000248550 ECE1P42892 770 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 CEBPAP49715 358 aaPredicted RBP4.81□□□□□ -1.64
PHTF2-201ENST00000248550 NBPF15Q8N660 670 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 FAM135BQ49AJ0 1406 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 SLAIN2Q9P270 581 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 SCAF11Q99590 1463 aaKnown RBP4.81□□□□□ -1.64
PHTF2-201ENST00000248550 SLIT1O75093 1534 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 CCAR1Q8IX12 1150 aaKnown RBP4.81□□□□□ -1.64
PHTF2-201ENST00000248550 HDAC9Q9UKV0 1011 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 UGGT1Q9NYU2 1555 aa4.81□□□□□ -1.64
PHTF2-201ENST00000248550 MINK1Q8N4C8 1332 aaPredicted RBP4.8□□□□□ -1.64
PHTF2-201ENST00000248550 KCNA4P22459 653 aa4.8□□□□□ -1.64
PHTF2-201ENST00000248550 APLP1P51693 650 aa4.8□□□□□ -1.64
PHTF2-201ENST00000248550 LTBP4Q8N2S1 1624 aa4.8□□□□□ -1.64
PHTF2-201ENST00000248550 SMARCC1Q92922 1105 aaPredicted RBP4.8□□□□□ -1.64
PHTF2-201ENST00000248550 TIAM1Q13009 1591 aa4.8□□□□□ -1.64
PHTF2-201ENST00000248550 NLRP13Q86W25 1043 aa4.8□□□□□ -1.64
PHTF2-201ENST00000248550 RBM27Q9P2N5 1060 aaKnown RBP4.8□□□□□ -1.64
PHTF2-201ENST00000248550 SYCP2Q9BX26 1530 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms