RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
SNRPA-201ENST00000243563 TMEM2Q9UHN6 1383 aa29.11■■■□□ 2.25
SNRPA-201ENST00000243563 DCAF11Q8TEB1 546 aa29.1■■■□□ 2.25
SNRPA-201ENST00000243563 KDM2AQ9Y2K7 1162 aa29.09■■■□□ 2.25
SNRPA-201ENST00000243563 MYOM2P54296 1465 aa29.06■■■□□ 2.24
SNRPA-201ENST00000243563 THEMISQ8N1K5 641 aaPredicted RBP29.05■■■□□ 2.24
SNRPA-201ENST00000243563 RPGRIP1LQ68CZ1 1315 aa29.05■■■□□ 2.24
SNRPA-201ENST00000243563 ADGRF5Q8IZF2 1346 aa29.05■■■□□ 2.24
SNRPA-201ENST00000243563 LTKP29376 864 aa29.04■■■□□ 2.24
SNRPA-201ENST00000243563 HSPA2P54652 639 aa29.04■■■□□ 2.24
SNRPA-201ENST00000243563 POLR1AO95602 1720 aaPredicted RBP29.04■■■□□ 2.24
SNRPA-201ENST00000243563 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
SNRPA-201ENST00000243563 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
SNRPA-201ENST00000243563 NRXN1Q9ULB1 1477 aa29.03■■■□□ 2.24
SNRPA-201ENST00000243563 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
SNRPA-201ENST00000243563 NRXN3Q9Y4C0 1643 aa29.01■■■□□ 2.24
SNRPA-201ENST00000243563 IQGAP1P46940 1657 aa29.01■■■□□ 2.23
SNRPA-201ENST00000243563 PPP1R15AO75807 674 aaPredicted RBP29.01■■■□□ 2.23
SNRPA-201ENST00000243563 PRAG1Q86YV5 1406 aa29■■■□□ 2.23
SNRPA-201ENST00000243563 STRCQ7RTU9 1775 aa28.97■■■□□ 2.23
SNRPA-201ENST00000243563 SCAF11Q99590 1463 aaKnown RBP28.97■■■□□ 2.23
SNRPA-201ENST00000243563 TRPM1Q7Z4N2 1603 aa28.97■■■□□ 2.23
SNRPA-201ENST00000243563 PIK3C2GO75747 1445 aa28.97■■■□□ 2.23
SNRPA-201ENST00000243563 TXNDC2Q86VQ3 553 aa28.96■■■□□ 2.23
SNRPA-201ENST00000243563 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
SNRPA-201ENST00000243563 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
SNRPA-201ENST00000243563 VGFO15240 615 aaPredicted RBP28.92■■■□□ 2.22
SNRPA-201ENST00000243563 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
SNRPA-201ENST00000243563 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.91■■■□□ 2.22
SNRPA-201ENST00000243563 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
SNRPA-201ENST00000243563 KIAA1210Q9ULL0 1709 aa28.9■■■□□ 2.22
SNRPA-201ENST00000243563 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
SNRPA-201ENST00000243563 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
SNRPA-201ENST00000243563 ALKQ9UM73 1620 aa28.89■■■□□ 2.21
SNRPA-201ENST00000243563 ANKLE2Q86XL3 938 aa28.88■■■□□ 2.21
SNRPA-201ENST00000243563 ASXL1Q8IXJ9 1541 aa28.88■■■□□ 2.21
SNRPA-201ENST00000243563 ADAMTS13Q76LX8 1427 aa28.87■■■□□ 2.21
SNRPA-201ENST00000243563 STAC3Q96MF2 364 aa28.87■■■□□ 2.21
SNRPA-201ENST00000243563 LAMC1P11047 1609 aa28.86■■■□□ 2.21
SNRPA-201ENST00000243563 MED14O60244 1454 aa28.86■■■□□ 2.21
SNRPA-201ENST00000243563 CFAP70Q5T0N1 1121 aa28.86■■■□□ 2.21
SNRPA-201ENST00000243563 RALGAPBQ86X10 1494 aa28.85■■■□□ 2.21
SNRPA-201ENST00000243563 HDGFP51858 240 aaKnown RBP28.84■■■□□ 2.21
SNRPA-201ENST00000243563 NPHP4O75161 1426 aaPredicted RBP28.83■■■□□ 2.21
SNRPA-201ENST00000243563 NBPF1Q3BBV0 1214 aa28.83■■■□□ 2.21
SNRPA-201ENST00000243563 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
SNRPA-201ENST00000243563 ADGRB1O14514 1584 aa28.82■■■□□ 2.2
SNRPA-201ENST00000243563 C14orf93Q9H972 538 aaKnown RBP28.81■■■□□ 2.2
SNRPA-201ENST00000243563 SLC26A8Q96RN1 970 aa28.79■■■□□ 2.2
SNRPA-201ENST00000243563 BCANQ96GW7 911 aa28.77■■■□□ 2.2
SNRPA-201ENST00000243563 DIP2AQ14689 1571 aa28.77■■■□□ 2.2
SNRPA-201ENST00000243563 METP08581 1390 aa28.76■■■□□ 2.19
SNRPA-201ENST00000243563 TMEM132EQ6IEE7 984 aa28.76■■■□□ 2.19
SNRPA-201ENST00000243563 ROCK2O75116 1388 aaKnown RBP28.74■■■□□ 2.19
SNRPA-201ENST00000243563 GPRASP1Q5JY77 1395 aa28.72■■■□□ 2.19
SNRPA-201ENST00000243563 PTPRUQ92729 1446 aa28.7■■■□□ 2.18
SNRPA-201ENST00000243563 CHD2O14647 1828 aaKnown RBP28.7■■■□□ 2.18
SNRPA-201ENST00000243563 TBX22Q9Y458 520 aa28.68■■■□□ 2.18
SNRPA-201ENST00000243563 STRCP1A6NGW2 1772 aa28.68■■■□□ 2.18
SNRPA-201ENST00000243563 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
SNRPA-201ENST00000243563 XRN1Q8IZH2 1706 aaKnown RBP28.66■■■□□ 2.18
SNRPA-201ENST00000243563 KNDC1Q76NI1 1749 aa28.65■■■□□ 2.18
SNRPA-201ENST00000243563 YTHDC2Q9H6S0 1430 aaKnown RBP28.65■■■□□ 2.18
SNRPA-201ENST00000243563 CARD11Q9BXL7 1154 aa28.65■■■□□ 2.18
SNRPA-201ENST00000243563 STK26Q9P289 416 aa28.61■■■□□ 2.17
SNRPA-201ENST00000243563 NWD1Q149M9 1564 aa28.6■■■□□ 2.17
SNRPA-201ENST00000243563 LRPPRCP42704 1394 aaKnown RBP28.6■■■□□ 2.17
SNRPA-201ENST00000243563 CPS1P31327 1500 aa28.58■■■□□ 2.17
SNRPA-201ENST00000243563 TRAK1Q9UPV9 953 aa28.58■■■□□ 2.17
SNRPA-201ENST00000243563 USP47Q96K76 1375 aa28.57■■■□□ 2.16
SNRPA-201ENST00000243563 PIK3R4Q99570 1358 aa28.56■■■□□ 2.16
SNRPA-201ENST00000243563 TECPR2O15040 1411 aa28.55■■■□□ 2.16
SNRPA-201ENST00000243563 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
SNRPA-201ENST00000243563 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
SNRPA-201ENST00000243563 ABCC11Q96J66 1382 aa28.53■■■□□ 2.16
SNRPA-201ENST00000243563 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
SNRPA-201ENST00000243563 QRICH2Q9H0J4 1663 aa28.53■■■□□ 2.16
SNRPA-201ENST00000243563 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
SNRPA-201ENST00000243563 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
SNRPA-201ENST00000243563 HSPA5P11021 654 aaKnown RBP28.51■■■□□ 2.15
SNRPA-201ENST00000243563 KCNA6P17658 529 aa28.51■■■□□ 2.15
SNRPA-201ENST00000243563 ZNF335Q9H4Z2 1342 aaPredicted RBP28.49■■■□□ 2.15
SNRPA-201ENST00000243563 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
SNRPA-201ENST00000243563 PTCH1Q13635 1447 aa28.47■■■□□ 2.15
SNRPA-201ENST00000243563 WAPLQ7Z5K2 1190 aa28.47■■■□□ 2.15
SNRPA-201ENST00000243563 DMRT2Q9Y5R5 561 aa28.47■■■□□ 2.15
SNRPA-201ENST00000243563 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
SNRPA-201ENST00000243563 XIRP1Q702N8 1843 aaKnown RBP28.46■■■□□ 2.15
SNRPA-201ENST00000243563 EIF4G2P78344 907 aaKnown RBP eCLIP28.46■■■□□ 2.15
SNRPA-201ENST00000243563 PRAM1Q96QH2 718 aa28.46■■■□□ 2.15
SNRPA-201ENST00000243563 SAFB2Q14151 953 aaKnown RBP eCLIP28.44■■■□□ 2.14
SNRPA-201ENST00000243563 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
SNRPA-201ENST00000243563 NALCNQ8IZF0 1738 aa28.43■■■□□ 2.14
SNRPA-201ENST00000243563 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
SNRPA-201ENST00000243563 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
SNRPA-201ENST00000243563 EIF3AQ14152 1382 aaKnown RBP28.42■■■□□ 2.14
SNRPA-201ENST00000243563 CENPJQ9HC77 1338 aaPredicted RBP28.41■■■□□ 2.14
SNRPA-201ENST00000243563 TESK2Q96S53 571 aa28.4■■■□□ 2.14
SNRPA-201ENST00000243563 LTBP4Q8N2S1 1624 aa28.39■■■□□ 2.13
SNRPA-201ENST00000243563 SIRT1Q96EB6 747 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms